RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
NPHP4-205ENST00000466897 CABP4P57796 275 aa19.9■□□□□ 0.78
NPHP4-205ENST00000466897 TEFQ10587 303 aa19.9■□□□□ 0.78
NPHP4-205ENST00000466897 DCTN1Q14203 1278 aa19.9■□□□□ 0.78
NPHP4-205ENST00000466897 BCL11BQ9C0K0 894 aaPredicted RBP19.9■□□□□ 0.78
NPHP4-205ENST00000466897 BABAM1Q9NWV8 329 aa19.9■□□□□ 0.78
NPHP4-205ENST00000466897 TMOD3Q9NYL9 352 aa19.9■□□□□ 0.78
NPHP4-205ENST00000466897 IL16Q14005 1332 aa19.89■□□□□ 0.77
NPHP4-205ENST00000466897 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
NPHP4-205ENST00000466897 ACSBG1Q96GR2 724 aa19.88■□□□□ 0.77
NPHP4-205ENST00000466897 KCNQ2O43526 872 aa19.87■□□□□ 0.77
NPHP4-205ENST00000466897 HNRNPUQ00839 825 aaKnown RBP eCLIP19.87■□□□□ 0.77
NPHP4-205ENST00000466897 TAF7Q15545 349 aaPredicted RBP19.87■□□□□ 0.77
NPHP4-205ENST00000466897 NFATC2IPQ8NCF5 419 aa19.87■□□□□ 0.77
NPHP4-205ENST00000466897 PIGBQ92521 554 aa19.87■□□□□ 0.77
NPHP4-205ENST00000466897 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
NPHP4-205ENST00000466897 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
NPHP4-205ENST00000466897 TRIM37O94972 964 aa19.85■□□□□ 0.77
NPHP4-205ENST00000466897 CCDC125Q86Z20 511 aa19.85■□□□□ 0.77
NPHP4-205ENST00000466897 SYTL4Q96C24 671 aaPredicted RBP19.85■□□□□ 0.77
NPHP4-205ENST00000466897 IFT57Q9NWB7 429 aa19.85■□□□□ 0.77
NPHP4-205ENST00000466897 ZNF853P0CG23 659 aa19.84■□□□□ 0.77
NPHP4-205ENST00000466897 CFAP44Q96MT7 982 aa19.84■□□□□ 0.77
NPHP4-205ENST00000466897 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
NPHP4-205ENST00000466897 SALL2Q9Y467 1007 aaPredicted RBP19.83■□□□□ 0.77
NPHP4-205ENST00000466897 TAF1LQ8IZX4 1826 aa19.82■□□□□ 0.76
NPHP4-205ENST00000466897 BTBD11A6QL63 1104 aa19.82■□□□□ 0.76
NPHP4-205ENST00000466897 CHL1O00533 1208 aa19.82■□□□□ 0.76
NPHP4-205ENST00000466897 GNAI1P63096 354 aa19.82■□□□□ 0.76
NPHP4-205ENST00000466897 SMARCC1Q92922 1105 aaPredicted RBP19.82■□□□□ 0.76
NPHP4-205ENST00000466897 LAMB4A4D0S4 1761 aa19.82■□□□□ 0.76
NPHP4-205ENST00000466897 RREB1Q92766 1687 aa19.81■□□□□ 0.76
NPHP4-205ENST00000466897 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
NPHP4-205ENST00000466897 ZNF790Q6PG37 636 aa19.81■□□□□ 0.76
NPHP4-205ENST00000466897 PTF1AQ7RTS3 328 aa19.81■□□□□ 0.76
NPHP4-205ENST00000466897 ATG3Q9NT62 314 aa19.81■□□□□ 0.76
NPHP4-205ENST00000466897 COL5A3P25940 1745 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-205ENST00000466897 TJP1Q07157 1748 aa19.8■□□□□ 0.76
NPHP4-205ENST00000466897 PLSCR1O15162 318 aa19.8■□□□□ 0.76
NPHP4-205ENST00000466897 GOLGA2Q08379 1002 aa19.8■□□□□ 0.76
NPHP4-205ENST00000466897 PALLDQ8WX93 1383 aa19.8■□□□□ 0.76
NPHP4-205ENST00000466897 TSPYL4Q9UJ04 414 aa19.79■□□□□ 0.76
NPHP4-205ENST00000466897 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
NPHP4-205ENST00000466897 C5P01031 1676 aa19.78■□□□□ 0.76
NPHP4-205ENST00000466897 TTC5Q8N0Z6 440 aa19.78■□□□□ 0.76
NPHP4-205ENST00000466897 E9PSI1 815 aa19.77■□□□□ 0.76
NPHP4-205ENST00000466897 SF3B2Q13435 895 aaKnown RBP19.77■□□□□ 0.76
NPHP4-205ENST00000466897 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
NPHP4-205ENST00000466897 HEG1Q9ULI3 1381 aa19.77■□□□□ 0.76
NPHP4-205ENST00000466897 APBA3O96018 575 aa19.76■□□□□ 0.75
NPHP4-205ENST00000466897 SLC39A6Q13433 755 aa19.76■□□□□ 0.75
NPHP4-205ENST00000466897 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
NPHP4-205ENST00000466897 MYH16Q9H6N6 1097 aa19.76■□□□□ 0.75
NPHP4-205ENST00000466897 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
NPHP4-205ENST00000466897 TRMT2AQ8IZ69 625 aaKnown RBP19.75■□□□□ 0.75
NPHP4-205ENST00000466897 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
NPHP4-205ENST00000466897 NUP188Q5SRE5 1749 aa19.75■□□□□ 0.75
NPHP4-205ENST00000466897 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
NPHP4-205ENST00000466897 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
NPHP4-205ENST00000466897 BAG6P46379 1132 aa19.74■□□□□ 0.75
NPHP4-205ENST00000466897 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
NPHP4-205ENST00000466897 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
NPHP4-205ENST00000466897 MIS18AQ9NYP9 233 aa19.74■□□□□ 0.75
NPHP4-205ENST00000466897 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
NPHP4-205ENST00000466897 SOS1Q07889 1333 aaPredicted RBP19.74■□□□□ 0.75
NPHP4-205ENST00000466897 LOC102724428A0A0B4J2F2 783 aa19.73■□□□□ 0.75
NPHP4-205ENST00000466897 KCNQ3O43525 872 aa19.73■□□□□ 0.75
NPHP4-205ENST00000466897 SIK1P57059 783 aa19.73■□□□□ 0.75
NPHP4-205ENST00000466897 SLC27A3Q5K4L6 730 aa19.73■□□□□ 0.75
NPHP4-205ENST00000466897 ZNF496Q96IT1 587 aaPredicted RBP19.73■□□□□ 0.75
NPHP4-205ENST00000466897 CACNA1FO60840 1977 aa19.72■□□□□ 0.75
NPHP4-205ENST00000466897 HOXB7P09629 217 aa19.71■□□□□ 0.75
NPHP4-205ENST00000466897 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
NPHP4-205ENST00000466897 PTCD1O75127 700 aaKnown RBP19.7■□□□□ 0.74
NPHP4-205ENST00000466897 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
NPHP4-205ENST00000466897 CDCA7LQ96GN5 454 aa19.7■□□□□ 0.74
NPHP4-205ENST00000466897 CAMKK2Q96RR4 588 aa19.7■□□□□ 0.74
NPHP4-205ENST00000466897 QSER1Q2KHR3 1735 aa19.69■□□□□ 0.74
NPHP4-205ENST00000466897 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
NPHP4-205ENST00000466897 SNRPA1P09661 255 aaKnown RBP19.69■□□□□ 0.74
NPHP4-205ENST00000466897 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
NPHP4-205ENST00000466897 DUSP27Q5VZP5 1158 aa19.69■□□□□ 0.74
NPHP4-205ENST00000466897 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
NPHP4-205ENST00000466897 RBM42Q9BTD8 480 aaKnown RBP19.69■□□□□ 0.74
NPHP4-205ENST00000466897 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
NPHP4-205ENST00000466897 CCNL1Q9UK58 526 aaPredicted RBP19.69■□□□□ 0.74
NPHP4-205ENST00000466897 MYH14Q7Z406 1995 aaKnown RBP19.68■□□□□ 0.74
NPHP4-205ENST00000466897 PROM2Q8N271 834 aa19.68■□□□□ 0.74
NPHP4-205ENST00000466897 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
NPHP4-205ENST00000466897 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
NPHP4-205ENST00000466897 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
NPHP4-205ENST00000466897 EN1Q05925 392 aaPredicted RBP19.66■□□□□ 0.74
NPHP4-205ENST00000466897 DEFB132Q7Z7B7 95 aa19.65■□□□□ 0.74
NPHP4-205ENST00000466897 CHMP4AQ9BY43 222 aa19.65■□□□□ 0.74
NPHP4-205ENST00000466897 LRRC4BQ9NT99 713 aa19.65■□□□□ 0.74
NPHP4-205ENST00000466897 TUBGCP6Q96RT7 1819 aa19.65■□□□□ 0.74
NPHP4-205ENST00000466897 CT47B1P0C2W7 299 aaPredicted RBP19.64■□□□□ 0.73
NPHP4-205ENST00000466897 ITPK1Q13572 414 aa19.64■□□□□ 0.73
NPHP4-205ENST00000466897 EZH2Q15910 746 aaKnown RBP19.64■□□□□ 0.73
NPHP4-205ENST00000466897 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms