RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CLDN10P78369 228 aa8.1□□□□□ -1.11
VPS13D-203ENST00000466732 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
VPS13D-203ENST00000466732 NBPF15Q8N660 670 aa8.1□□□□□ -1.11
VPS13D-203ENST00000466732 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
VPS13D-203ENST00000466732 KIAA1024Q9UPX6 916 aa8.1□□□□□ -1.11
VPS13D-203ENST00000466732 LMOD1P29536 600 aaPredicted RBP8.09□□□□□ -1.11
VPS13D-203ENST00000466732 SMTNP53814 917 aa8.09□□□□□ -1.11
VPS13D-203ENST00000466732 TMEM214Q6NUQ4 689 aaKnown RBP8.09□□□□□ -1.11
VPS13D-203ENST00000466732 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
VPS13D-203ENST00000466732 OGFOD1Q8N543 542 aa8.09□□□□□ -1.11
VPS13D-203ENST00000466732 SLC4A9Q96Q91 983 aa8.09□□□□□ -1.11
VPS13D-203ENST00000466732 DNAAF2Q9NVR5 837 aaKnown RBP8.09□□□□□ -1.11
VPS13D-203ENST00000466732 ERBB4Q15303 1308 aa8.08□□□□□ -1.12
VPS13D-203ENST00000466732 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
VPS13D-203ENST00000466732 WDR44Q5JSH3 913 aa8.08□□□□□ -1.12
VPS13D-203ENST00000466732 CFAP70Q5T0N1 1121 aa8.08□□□□□ -1.12
VPS13D-203ENST00000466732 PPARGC1BQ86YN6 1023 aaKnown RBP8.08□□□□□ -1.12
VPS13D-203ENST00000466732 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS13D-203ENST00000466732 IRF7Q92985 503 aa8.08□□□□□ -1.12
VPS13D-203ENST00000466732 ZNF358Q9NW07 568 aa8.08□□□□□ -1.12
VPS13D-203ENST00000466732 VSIG8P0DPA2 414 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 ITGA6P23229 1130 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 PHKA2P46019 1235 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 KANK4Q5T7N3 995 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-203ENST00000466732 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 TPCN2Q8NHX9 752 aa8.07□□□□□ -1.12
VPS13D-203ENST00000466732 A6NJY4 79 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 ARID3CA6NKF2 412 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 BACH1O14867 736 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 RASA1P20936 1047 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 MTFR1Q15390 333 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 C4orf17Q53FE4 359 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 SIX5Q8N196 739 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 DYRK1BQ9Y463 629 aa8.06□□□□□ -1.12
VPS13D-203ENST00000466732 DKK1O94907 266 aa8.05□□□□□ -1.12
VPS13D-203ENST00000466732 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
VPS13D-203ENST00000466732 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-203ENST00000466732 VRTNQ9H8Y1 702 aa8.05□□□□□ -1.12
VPS13D-203ENST00000466732 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-203ENST00000466732 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
VPS13D-203ENST00000466732 GMPRP36959 345 aa8.04□□□□□ -1.12
VPS13D-203ENST00000466732 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
VPS13D-203ENST00000466732 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-203ENST00000466732 IQSEC3Q9UPP2 1182 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-203ENST00000466732 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
VPS13D-203ENST00000466732 CDC14CA4D256 554 aa8.03□□□□□ -1.12
VPS13D-203ENST00000466732 SFI1A8K8P3 1242 aa8.03□□□□□ -1.12
VPS13D-203ENST00000466732 RFX1P22670 979 aa8.03□□□□□ -1.12
VPS13D-203ENST00000466732 EPHA4P54764 986 aa8.03□□□□□ -1.12
VPS13D-203ENST00000466732 CRTC2Q53ET0 693 aaPredicted RBP8.03□□□□□ -1.12
VPS13D-203ENST00000466732 VWA5B2Q8N398 1253 aa8.03□□□□□ -1.12
VPS13D-203ENST00000466732 F11P03951 625 aa8.02□□□□□ -1.13
VPS13D-203ENST00000466732 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
VPS13D-203ENST00000466732 PTK7Q13308 1070 aa8.02□□□□□ -1.13
VPS13D-203ENST00000466732 RIPOR1Q6ZS17 1223 aa8.02□□□□□ -1.13
VPS13D-203ENST00000466732 TNS4Q8IZW8 715 aa8.02□□□□□ -1.13
VPS13D-203ENST00000466732 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
VPS13D-203ENST00000466732 GPR161Q8N6U8 529 aaKnown RBP8.02□□□□□ -1.13
VPS13D-203ENST00000466732 NIFKQ9BYG3 293 aaKnown RBP8.02□□□□□ -1.13
VPS13D-203ENST00000466732 SCHIP1Q9P0W5 487 aaPredicted RBP8.02□□□□□ -1.13
VPS13D-203ENST00000466732 A0A1B0GTH6 734 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L15C9J2P7 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L10C9JJH3 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L13C9JLJ4 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L12C9JPN9 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L11C9JVI0 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L21D6R901 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L18D6R9N7 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L22D6RA61 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L17D6RBQ6 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L19D6RCP7 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L20D6RJB6 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 M0R2N6 131 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 WIPF1O43516 503 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 USP17L24Q0WX57 530 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 SV2AQ7L0J3 742 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 TRIM22Q8IYM9 498 aa8.01□□□□□ -1.13
VPS13D-203ENST00000466732 RBM19Q9Y4C8 960 aaKnown RBP8.01□□□□□ -1.13
VPS13D-203ENST00000466732 FOXK2Q01167 660 aa8□□□□□ -1.13
VPS13D-203ENST00000466732 DBN1Q16643 649 aa8□□□□□ -1.13
VPS13D-203ENST00000466732 CCDC97Q96F63 343 aaPredicted RBP8□□□□□ -1.13
VPS13D-203ENST00000466732 GPAMQ9HCL2 828 aa8□□□□□ -1.13
VPS13D-203ENST00000466732 CABP1Q9NZU7 370 aa8□□□□□ -1.13
VPS13D-203ENST00000466732 SERPINA10Q9UK55 444 aa8□□□□□ -1.13
VPS13D-203ENST00000466732 H7C1W4 665 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 MSX1P28360 303 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 SEC13P55735 322 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 DPYDQ12882 1025 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 TBCELQ5QJ74 424 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 ANKMY2Q8IV38 441 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 SLC9A9Q8IVB4 645 aa7.99□□□□□ -1.13
VPS13D-203ENST00000466732 TSEN2Q8NCE0 465 aaKnown RBP7.99□□□□□ -1.13
VPS13D-203ENST00000466732 ZNF837Q96EG3 531 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms