RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 SLAIN2Q9P270 581 aa25.74■■□□□ 1.71
CCDC78-207ENST00000466708 G2E3Q7L622 706 aa25.74■■□□□ 1.71
CCDC78-207ENST00000466708 EIF4A1P60842 406 aaKnown RBP25.73■■□□□ 1.71
CCDC78-207ENST00000466708 SIRT2Q8IXJ6 389 aa25.73■■□□□ 1.71
CCDC78-207ENST00000466708 RAPGEF4Q8WZA2 1011 aa25.73■■□□□ 1.71
CCDC78-207ENST00000466708 FLIIQ13045 1269 aa25.72■■□□□ 1.71
CCDC78-207ENST00000466708 MPRIPQ6WCQ1 1025 aa25.72■■□□□ 1.71
CCDC78-207ENST00000466708 CHD1LQ86WJ1 897 aa25.72■■□□□ 1.71
CCDC78-207ENST00000466708 RPAP2Q8IXW5 612 aaPredicted RBP25.72■■□□□ 1.71
CCDC78-207ENST00000466708 CABLES1Q8TDN4 633 aa25.72■■□□□ 1.71
CCDC78-207ENST00000466708 NLRP2Q9NX02 1062 aa25.72■■□□□ 1.71
CCDC78-207ENST00000466708 BTBD11A6QL63 1104 aa25.71■■□□□ 1.71
CCDC78-207ENST00000466708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.71■■□□□ 1.71
CCDC78-207ENST00000466708 SOS2Q07890 1332 aaPredicted RBP25.71■■□□□ 1.71
CCDC78-207ENST00000466708 HDGFL1Q5TGJ6 251 aa25.7■■□□□ 1.71
CCDC78-207ENST00000466708 ADAMTS7Q9UKP4 1686 aa25.7■■□□□ 1.7
CCDC78-207ENST00000466708 ANKRD44Q8N8A2 993 aa25.7■■□□□ 1.7
CCDC78-207ENST00000466708 TATP17735 454 aaPredicted RBP25.69■■□□□ 1.7
CCDC78-207ENST00000466708 FKBP5Q13451 457 aaPredicted RBP25.67■■□□□ 1.7
CCDC78-207ENST00000466708 SPG7Q9UQ90 795 aa25.67■■□□□ 1.7
CCDC78-207ENST00000466708 ATP10DQ9P241 1426 aa25.67■■□□□ 1.7
CCDC78-207ENST00000466708 CSB-PGBD3P0DP91 1061 aa25.67■■□□□ 1.7
CCDC78-207ENST00000466708 ANKRD45Q5TZF3 282 aa25.67■■□□□ 1.7
CCDC78-207ENST00000466708 SLC4A10Q6U841 1118 aa25.67■■□□□ 1.7
CCDC78-207ENST00000466708 MEIS3Q99687 375 aa25.66■■□□□ 1.7
CCDC78-207ENST00000466708 LNPKQ9C0E8 428 aa25.66■■□□□ 1.7
CCDC78-207ENST00000466708 DCTPP1Q9H773 170 aa25.66■■□□□ 1.7
CCDC78-207ENST00000466708 PXDNLA1KZ92 1463 aa25.66■■□□□ 1.7
CCDC78-207ENST00000466708 F6X3S4 739 aa25.65■■□□□ 1.7
CCDC78-207ENST00000466708 SIPA1L3O60292 1781 aaPredicted RBP25.65■■□□□ 1.7
CCDC78-207ENST00000466708 NECTIN2Q92692 538 aa25.65■■□□□ 1.7
CCDC78-207ENST00000466708 CEP85Q6P2H3 762 aa25.65■■□□□ 1.7
CCDC78-207ENST00000466708 N4BP2Q86UW6 1770 aaPredicted RBP25.64■■□□□ 1.7
CCDC78-207ENST00000466708 CHRNA2Q15822 529 aa25.64■■□□□ 1.7
CCDC78-207ENST00000466708 UPF2Q9HAU5 1272 aaKnown RBP25.63■■□□□ 1.69
CCDC78-207ENST00000466708 HEG1Q9ULI3 1381 aa25.61■■□□□ 1.69
CCDC78-207ENST00000466708 KCNQ3O43525 872 aa25.61■■□□□ 1.69
CCDC78-207ENST00000466708 GNAI3P08754 354 aa25.61■■□□□ 1.69
CCDC78-207ENST00000466708 MEGF6O75095 1541 aa25.61■■□□□ 1.69
CCDC78-207ENST00000466708 HMMRO75330 724 aa25.6■■□□□ 1.69
CCDC78-207ENST00000466708 SCN11AQ9UI33 1791 aa25.6■■□□□ 1.69
CCDC78-207ENST00000466708 SEC24BO95487 1268 aa25.6■■□□□ 1.69
CCDC78-207ENST00000466708 PHKG2P15735 406 aa25.6■■□□□ 1.69
CCDC78-207ENST00000466708 EIF2S2P20042 333 aaKnown RBP25.6■■□□□ 1.69
CCDC78-207ENST00000466708 IFNL2Q8IZJ0 200 aa25.6■■□□□ 1.69
CCDC78-207ENST00000466708 GNAI2P04899 355 aa25.59■■□□□ 1.69
CCDC78-207ENST00000466708 PKD1L3Q7Z443 1732 aa25.58■■□□□ 1.69
CCDC78-207ENST00000466708 BMP2KLQ5H9B9 411 aa25.58■■□□□ 1.68
CCDC78-207ENST00000466708 PRDM11Q9NQV5 511 aa25.58■■□□□ 1.68
CCDC78-207ENST00000466708 NHSL1Q5SYE7 1610 aa25.57■■□□□ 1.68
CCDC78-207ENST00000466708 GIGYF1O75420 1035 aaPredicted RBP25.57■■□□□ 1.68
CCDC78-207ENST00000466708 PHAXQ9H814 394 aaKnown RBP25.57■■□□□ 1.68
CCDC78-207ENST00000466708 DBF4Q9UBU7 674 aaPredicted RBP25.57■■□□□ 1.68
CCDC78-207ENST00000466708 SLC52A2Q9HAB3 445 aa25.56■■□□□ 1.68
CCDC78-207ENST00000466708 CHPF2Q9P2E5 772 aa25.56■■□□□ 1.68
CCDC78-207ENST00000466708 HSP90AB1P08238 724 aaKnown RBP25.56■■□□□ 1.68
CCDC78-207ENST00000466708 KDM6AO15550 1401 aaPredicted RBP25.55■■□□□ 1.68
CCDC78-207ENST00000466708 WDR17Q8IZU2 1322 aa25.55■■□□□ 1.68
CCDC78-207ENST00000466708 DCAF5Q96JK2 942 aa25.54■■□□□ 1.68
CCDC78-207ENST00000466708 ABCA3Q99758 1704 aa25.53■■□□□ 1.68
CCDC78-207ENST00000466708 TBC1D32Q96NH3 1257 aa25.52■■□□□ 1.68
CCDC78-207ENST00000466708 DAXXQ9UER7 740 aaPredicted RBP25.52■■□□□ 1.68
CCDC78-207ENST00000466708 MRC1P22897 1456 aa25.51■■□□□ 1.68
CCDC78-207ENST00000466708 ZNF790Q6PG37 636 aa25.51■■□□□ 1.67
CCDC78-207ENST00000466708 SRCIN1Q9C0H9 1055 aa25.51■■□□□ 1.67
CCDC78-207ENST00000466708 PARP4Q9UKK3 1724 aaKnown RBP25.5■■□□□ 1.67
CCDC78-207ENST00000466708 CYP27B1O15528 508 aa25.5■■□□□ 1.67
CCDC78-207ENST00000466708 DNAAF4Q8WXU2 420 aa25.5■■□□□ 1.67
CCDC78-207ENST00000466708 COL5A2P05997 1499 aaPredicted RBP25.5■■□□□ 1.67
CCDC78-207ENST00000466708 USP44Q9H0E7 712 aa25.49■■□□□ 1.67
CCDC78-207ENST00000466708 ATP8B2P98198 1209 aa25.49■■□□□ 1.67
CCDC78-207ENST00000466708 HYPKQ9NX55 129 aa25.49■■□□□ 1.67
CCDC78-207ENST00000466708 UBTFL1P0CB47 393 aaPredicted RBP25.48■■□□□ 1.67
CCDC78-207ENST00000466708 TOM1L2Q6ZVM7 507 aa25.48■■□□□ 1.67
CCDC78-207ENST00000466708 PLEKHM2Q8IWE5 1019 aa25.48■■□□□ 1.67
CCDC78-207ENST00000466708 NFATC2IPQ8NCF5 419 aa25.48■■□□□ 1.67
CCDC78-207ENST00000466708 PI4KAP2A4QPH2 592 aa25.47■■□□□ 1.67
CCDC78-207ENST00000466708 PI4KAP1Q8N8J0 262 aa25.47■■□□□ 1.67
CCDC78-207ENST00000466708 CARD10Q9BWT7 1032 aa25.47■■□□□ 1.67
CCDC78-207ENST00000466708 BEND3Q5T5X7 828 aa25.46■■□□□ 1.67
CCDC78-207ENST00000466708 DDX21Q9NR30 783 aaKnown RBP eCLIP25.45■■□□□ 1.66
CCDC78-207ENST00000466708 PCDH11XQ9BZA7 1347 aa25.45■■□□□ 1.66
CCDC78-207ENST00000466708 PCDH11YQ9BZA8 1340 aa25.45■■□□□ 1.66
CCDC78-207ENST00000466708 ADCY9O60503 1353 aa25.44■■□□□ 1.66
CCDC78-207ENST00000466708 ZCRB1Q8TBF4 217 aaKnown RBP25.44■■□□□ 1.66
CCDC78-207ENST00000466708 LRRFIP2Q9Y608 721 aaKnown RBP25.44■■□□□ 1.66
CCDC78-207ENST00000466708 EIF5BO60841 1220 aaKnown RBP25.43■■□□□ 1.66
CCDC78-207ENST00000466708 KSR2Q6VAB6 950 aa25.43■■□□□ 1.66
CCDC78-207ENST00000466708 ANXA1P04083 346 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 MFAP1P55081 439 aaKnown RBP25.42■■□□□ 1.66
CCDC78-207ENST00000466708 SLC39A6Q13433 755 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 TTC5Q8N0Z6 440 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 ALDH1L1O75891 902 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 DDX58O95786 925 aaKnown RBP25.42■■□□□ 1.66
CCDC78-207ENST00000466708 CABP4P57796 275 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 BECN1Q14457 450 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 C22orf23Q9BZE7 217 aa25.42■■□□□ 1.66
CCDC78-207ENST00000466708 PRAMEF22A3QJZ6 481 aa25.41■■□□□ 1.66
CCDC78-207ENST00000466708 IL2RBP14784 551 aa25.4■■□□□ 1.66
CCDC78-207ENST00000466708 TTC22Q5TAA0 569 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms