RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 CYP27B1O15528 508 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 MS4A1P11836 297 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 FANCIQ9NVI1 1328 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 BRWD3Q6RI45 1802 aa8.73□□□□□ -1.01
ATP2B4-206ENST00000466407 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
ATP2B4-206ENST00000466407 AAMPQ13685 434 aa8.72□□□□□ -1.01
ATP2B4-206ENST00000466407 RGS17Q9UGC6 210 aaPredicted RBP8.72□□□□□ -1.01
ATP2B4-206ENST00000466407 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
ATP2B4-206ENST00000466407 ERBB4Q15303 1308 aa8.72□□□□□ -1.01
ATP2B4-206ENST00000466407 KIF16BQ96L93 1317 aa8.72□□□□□ -1.01
ATP2B4-206ENST00000466407 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.02
ATP2B4-206ENST00000466407 IL17REQ8NFR9 667 aa8.71□□□□□ -1.02
ATP2B4-206ENST00000466407 TEX13AQ9BXU3 409 aaPredicted RBP8.71□□□□□ -1.02
ATP2B4-206ENST00000466407 TSPYL4Q9UJ04 414 aa8.71□□□□□ -1.02
ATP2B4-206ENST00000466407 RNF123Q5XPI4 1314 aa8.71□□□□□ -1.02
ATP2B4-206ENST00000466407 HEG1Q9ULI3 1381 aa8.71□□□□□ -1.02
ATP2B4-206ENST00000466407 BTBD11A6QL63 1104 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 CABP4P57796 275 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 TTC5Q8N0Z6 440 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 CHMP4BQ9H444 224 aaKnown RBP8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 QTRT2Q9H974 415 aaKnown RBP8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 RCAN3Q9UKA8 241 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 LY75O60449 1722 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 BTAF1O14981 1849 aa8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 IBTKQ9P2D0 1353 aaPredicted RBP8.7□□□□□ -1.02
ATP2B4-206ENST00000466407 IPO8O15397 1037 aaKnown RBP8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 ZNF790Q6PG37 636 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 MCM10Q7L590 875 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 ARHGAP45Q92619 1136 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 TMOD3Q9NYL9 352 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 USP35Q9P2H5 1018 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 C5P01031 1676 aa8.69□□□□□ -1.02
ATP2B4-206ENST00000466407 FAM98CQ17RN3 349 aaKnown RBP8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 TWISTNBQ3B726 338 aaPredicted RBP8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 CCDC30Q5VVM6 783 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 SALL2Q9Y467 1007 aaPredicted RBP8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 RGS12O14924 1447 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 PXDNLA1KZ92 1463 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 RREB1Q92766 1687 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
ATP2B4-206ENST00000466407 RGL2O15211 777 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 NEFLP07196 543 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 PTPRCP08575 1304 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 RXRBP28702 533 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 CDCA7LQ96GN5 454 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 STK31Q9BXU1 1019 aa8.67□□□□□ -1.02
ATP2B4-206ENST00000466407 SNRPA1P09661 255 aaKnown RBP8.66□□□□□ -1.02
ATP2B4-206ENST00000466407 EIF4A1P60842 406 aaKnown RBP8.66□□□□□ -1.02
ATP2B4-206ENST00000466407 PDE3AQ14432 1141 aa8.66□□□□□ -1.02
ATP2B4-206ENST00000466407 SEPT12Q8IYM1 358 aa8.66□□□□□ -1.02
ATP2B4-206ENST00000466407 DDX54Q8TDD1 881 aaKnown RBP8.66□□□□□ -1.02
ATP2B4-206ENST00000466407 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
ATP2B4-206ENST00000466407 VAMP4O75379 141 aa8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 RARSP54136 660 aaKnown RBP8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 DCTN1Q14203 1278 aa8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 SPINK5Q9NQ38 1064 aaPredicted RBP8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 LAS1LQ9Y4W2 734 aaKnown RBP8.65□□□□□ -1.02
ATP2B4-206ENST00000466407 TJP1Q07157 1748 aa8.65□□□□□ -1.03
ATP2B4-206ENST00000466407 QSER1Q2KHR3 1735 aa8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 A0A0G2JS52 829 aa8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 GIGYF1O75420 1035 aaPredicted RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 MYT1Q01538 1121 aa8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 TSR2Q969E8 191 aaKnown RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 THUMPD2Q9BTF0 503 aaKnown RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 API5Q9BZZ5 524 aaKnown RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 BCL11BQ9C0K0 894 aaPredicted RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 DBF4Q9UBU7 674 aaPredicted RBP8.64□□□□□ -1.03
ATP2B4-206ENST00000466407 TNS1Q9HBL0 1735 aaKnown RBP8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 STARD3NLO95772 234 aa8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 ZKSCAN2Q63HK3 967 aa8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 HDAC5Q9UQL6 1122 aa8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
ATP2B4-206ENST00000466407 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
ATP2B4-206ENST00000466407 SLC27A3Q5K4L6 730 aa8.62□□□□□ -1.03
ATP2B4-206ENST00000466407 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
ATP2B4-206ENST00000466407 PIGBQ92521 554 aa8.62□□□□□ -1.03
ATP2B4-206ENST00000466407 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATP2B4-206ENST00000466407 PALLDQ8WX93 1383 aa8.61□□□□□ -1.03
ATP2B4-206ENST00000466407 ARFGEF2Q9Y6D5 1785 aa8.61□□□□□ -1.03
ATP2B4-206ENST00000466407 ATF7IPQ6VMQ6 1270 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms