RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-208ENST00000466101 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
CCNL1-208ENST00000466101 ANP32CO43423 234 aa22.44■■□□□ 1.18
CCNL1-208ENST00000466101 MRC1P22897 1456 aa22.44■■□□□ 1.18
CCNL1-208ENST00000466101 SIK1P57059 783 aa22.44■■□□□ 1.18
CCNL1-208ENST00000466101 PLEKHF1Q96S99 279 aa22.44■■□□□ 1.18
CCNL1-208ENST00000466101 RBM42Q9BTD8 480 aaKnown RBP22.44■■□□□ 1.18
CCNL1-208ENST00000466101 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
CCNL1-208ENST00000466101 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
CCNL1-208ENST00000466101 WDR43Q15061 677 aaKnown RBP eCLIP22.43■■□□□ 1.18
CCNL1-208ENST00000466101 IL17REQ8NFR9 667 aa22.43■■□□□ 1.18
CCNL1-208ENST00000466101 AKT1S1Q96B36 256 aa22.43■■□□□ 1.18
CCNL1-208ENST00000466101 PDGFDQ9GZP0 370 aaPredicted RBP22.43■■□□□ 1.18
CCNL1-208ENST00000466101 CASZ1Q86V15 1759 aa22.42■■□□□ 1.18
CCNL1-208ENST00000466101 MAPK8IP3Q9UPT6 1336 aa22.41■■□□□ 1.18
CCNL1-208ENST00000466101 ATP6V1AP38606 617 aa22.41■■□□□ 1.18
CCNL1-208ENST00000466101 PNNQ9H307 717 aaKnown RBP22.41■■□□□ 1.18
CCNL1-208ENST00000466101 PTCD1O75127 700 aaKnown RBP22.4■■□□□ 1.18
CCNL1-208ENST00000466101 TEFQ10587 303 aa22.4■■□□□ 1.18
CCNL1-208ENST00000466101 SLC39A6Q13433 755 aa22.4■■□□□ 1.18
CCNL1-208ENST00000466101 CCDC184Q52MB2 194 aa22.4■■□□□ 1.18
CCNL1-208ENST00000466101 RTF1Q92541 710 aaKnown RBP22.4■■□□□ 1.18
CCNL1-208ENST00000466101 TFCP2L1Q9NZI6 479 aa22.4■■□□□ 1.18
CCNL1-208ENST00000466101 C4BP0C0L5 1744 aa22.4■■□□□ 1.18
CCNL1-208ENST00000466101 ITPK1Q13572 414 aa22.39■■□□□ 1.17
CCNL1-208ENST00000466101 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
CCNL1-208ENST00000466101 MCM10Q7L590 875 aa22.39■■□□□ 1.17
CCNL1-208ENST00000466101 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
CCNL1-208ENST00000466101 SIPA1L3O60292 1781 aaPredicted RBP22.39■■□□□ 1.17
CCNL1-208ENST00000466101 LINC00116Q8NCU8 138 aa22.38■■□□□ 1.17
CCNL1-208ENST00000466101 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
CCNL1-208ENST00000466101 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
CCNL1-208ENST00000466101 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
CCNL1-208ENST00000466101 CEMIPQ8WUJ3 1361 aa22.37■■□□□ 1.17
CCNL1-208ENST00000466101 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
CCNL1-208ENST00000466101 LRP5O75197 1615 aa22.35■■□□□ 1.17
CCNL1-208ENST00000466101 PNPLA7Q6ZV29 1317 aa22.35■■□□□ 1.17
CCNL1-208ENST00000466101 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
CCNL1-208ENST00000466101 AK7Q96M32 723 aa22.35■■□□□ 1.17
CCNL1-208ENST00000466101 ZNF831Q5JPB2 1677 aa22.35■■□□□ 1.17
CCNL1-208ENST00000466101 COL5A3P25940 1745 aaPredicted RBP22.34■■□□□ 1.17
CCNL1-208ENST00000466101 TJP1Q07157 1748 aa22.34■■□□□ 1.17
CCNL1-208ENST00000466101 SMIM5Q71RC9 77 aa22.33■■□□□ 1.17
CCNL1-208ENST00000466101 UBR2Q8IWV8 1755 aa22.33■■□□□ 1.16
CCNL1-208ENST00000466101 KCPQ6ZWJ8 1503 aa22.32■■□□□ 1.16
CCNL1-208ENST00000466101 MSH5O43196 834 aa22.32■■□□□ 1.16
CCNL1-208ENST00000466101 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
CCNL1-208ENST00000466101 RUNDC1Q96C34 613 aa22.32■■□□□ 1.16
CCNL1-208ENST00000466101 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
CCNL1-208ENST00000466101 RRP7AQ9Y3A4 280 aaKnown RBP22.32■■□□□ 1.16
CCNL1-208ENST00000466101 UBR3Q6ZT12 1888 aa22.32■■□□□ 1.16
CCNL1-208ENST00000466101 BTBD11A6QL63 1104 aa22.31■■□□□ 1.16
CCNL1-208ENST00000466101 PHF14O94880 888 aa22.31■■□□□ 1.16
CCNL1-208ENST00000466101 HMGB2P26583 209 aaKnown RBP22.31■■□□□ 1.16
CCNL1-208ENST00000466101 TTC5Q8N0Z6 440 aa22.31■■□□□ 1.16
CCNL1-208ENST00000466101 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
CCNL1-208ENST00000466101 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
CCNL1-208ENST00000466101 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
CCNL1-208ENST00000466101 RIPK4P57078 832 aa22.3■■□□□ 1.16
CCNL1-208ENST00000466101 NEUROD2Q15784 382 aa22.3■■□□□ 1.16
CCNL1-208ENST00000466101 AMIGO3Q86WK7 504 aa22.3■■□□□ 1.16
CCNL1-208ENST00000466101 SPON1Q9HCB6 807 aa22.3■■□□□ 1.16
CCNL1-208ENST00000466101 GNPATO15228 680 aa22.29■■□□□ 1.16
CCNL1-208ENST00000466101 ZNF790Q6PG37 636 aa22.29■■□□□ 1.16
CCNL1-208ENST00000466101 COL23A1Q86Y22 540 aaPredicted RBP22.29■■□□□ 1.16
CCNL1-208ENST00000466101 KCNQ3O43525 872 aa22.28■■□□□ 1.16
CCNL1-208ENST00000466101 DNAJC10Q8IXB1 793 aa22.28■■□□□ 1.16
CCNL1-208ENST00000466101 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
CCNL1-208ENST00000466101 MYH14Q7Z406 1995 aaKnown RBP22.27■■□□□ 1.15
CCNL1-208ENST00000466101 ZNF496Q96IT1 587 aaPredicted RBP22.26■■□□□ 1.15
CCNL1-208ENST00000466101 MTFR1LQ9H019 292 aa22.26■■□□□ 1.15
CCNL1-208ENST00000466101 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
CCNL1-208ENST00000466101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.25■■□□□ 1.15
CCNL1-208ENST00000466101 CRKLP46109 303 aaKnown RBP22.25■■□□□ 1.15
CCNL1-208ENST00000466101 TAF7Q15545 349 aaPredicted RBP22.25■■□□□ 1.15
CCNL1-208ENST00000466101 CNTNAP4Q9C0A0 1308 aa22.25■■□□□ 1.15
CCNL1-208ENST00000466101 SSFA2P28290 1259 aa22.23■■□□□ 1.15
CCNL1-208ENST00000466101 RC3H1Q5TC82 1133 aaKnown RBP22.23■■□□□ 1.15
CCNL1-208ENST00000466101 FLAD1Q8NFF5 587 aa22.23■■□□□ 1.15
CCNL1-208ENST00000466101 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
CCNL1-208ENST00000466101 RTCBQ9Y3I0 505 aaKnown RBP22.23■■□□□ 1.15
CCNL1-208ENST00000466101 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
CCNL1-208ENST00000466101 PTGER2P43116 358 aa22.22■■□□□ 1.15
CCNL1-208ENST00000466101 LMOD3Q0VAK6 560 aa22.22■■□□□ 1.15
CCNL1-208ENST00000466101 MSL1Q68DK7 614 aa22.22■■□□□ 1.15
CCNL1-208ENST00000466101 VSIG10Q8N0Z9 540 aa22.22■■□□□ 1.15
CCNL1-208ENST00000466101 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
CCNL1-208ENST00000466101 FMNL2Q96PY5 1086 aa22.22■■□□□ 1.15
CCNL1-208ENST00000466101 PPP1R1BQ9UD71 204 aaPredicted RBP22.22■■□□□ 1.15
CCNL1-208ENST00000466101 KDM3BQ7LBC6 1761 aa22.21■■□□□ 1.15
CCNL1-208ENST00000466101 SENP3-EIF4A1A0A087X0R7 540 aa22.21■■□□□ 1.15
CCNL1-208ENST00000466101 APAF1O14727 1248 aa22.21■■□□□ 1.15
CCNL1-208ENST00000466101 CYP19A1P11511 503 aaPredicted RBP22.21■■□□□ 1.15
CCNL1-208ENST00000466101 RPS6KA4O75676 772 aa22.2■■□□□ 1.14
CCNL1-208ENST00000466101 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
CCNL1-208ENST00000466101 CCDC87Q9NVE4 849 aa22.2■■□□□ 1.14
CCNL1-208ENST00000466101 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.14
CCNL1-208ENST00000466101 TRAPPC3LQ5T215 181 aa22.19■■□□□ 1.14
CCNL1-208ENST00000466101 C4AP0C0L4 1744 aa22.19■■□□□ 1.14
CCNL1-208ENST00000466101 COL24A1Q17RW2 1714 aa22.18■■□□□ 1.14
CCNL1-208ENST00000466101 SGIP1Q9BQI5 828 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms