RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
CACNA1C-224ENST00000465934 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
CACNA1C-224ENST00000465934 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
CACNA1C-224ENST00000465934 C1orf141Q5JVX7 400 aa19.05■□□□□ 0.64
CACNA1C-224ENST00000465934 SLC4A9Q96Q91 983 aa19.05■□□□□ 0.64
CACNA1C-224ENST00000465934 GOLGB1Q14789 3259 aaKnown RBP19.04■□□□□ 0.64
CACNA1C-224ENST00000465934 CABP4P57796 275 aa19.04■□□□□ 0.64
CACNA1C-224ENST00000465934 TAF1LQ8IZX4 1826 aa19.04■□□□□ 0.64
CACNA1C-224ENST00000465934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.03■□□□□ 0.64
CACNA1C-224ENST00000465934 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
CACNA1C-224ENST00000465934 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
CACNA1C-224ENST00000465934 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
CACNA1C-224ENST00000465934 COL24A1Q17RW2 1714 aa19.03■□□□□ 0.64
CACNA1C-224ENST00000465934 YY1P25490 414 aa19.02■□□□□ 0.64
CACNA1C-224ENST00000465934 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
CACNA1C-224ENST00000465934 NLGN2Q8NFZ4 835 aa19.02■□□□□ 0.64
CACNA1C-224ENST00000465934 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
CACNA1C-224ENST00000465934 GNPATO15228 680 aa19.01■□□□□ 0.63
CACNA1C-224ENST00000465934 NFATC2IPQ8NCF5 419 aa19.01■□□□□ 0.63
CACNA1C-224ENST00000465934 HMGB2P26583 209 aaKnown RBP18.99■□□□□ 0.63
CACNA1C-224ENST00000465934 SSFA2P28290 1259 aa18.99■□□□□ 0.63
CACNA1C-224ENST00000465934 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
CACNA1C-224ENST00000465934 AKAP4Q5JQC9 854 aa18.99■□□□□ 0.63
CACNA1C-224ENST00000465934 LGR6Q9HBX8 967 aa18.99■□□□□ 0.63
CACNA1C-224ENST00000465934 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
CACNA1C-224ENST00000465934 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
CACNA1C-224ENST00000465934 UBR3Q6ZT12 1888 aa18.97■□□□□ 0.63
CACNA1C-224ENST00000465934 RNMTO43148 476 aaKnown RBP18.94■□□□□ 0.62
CACNA1C-224ENST00000465934 GPR162Q16538 588 aa18.94■□□□□ 0.62
CACNA1C-224ENST00000465934 PELP1Q8IZL8 1130 aaKnown RBP18.94■□□□□ 0.62
CACNA1C-224ENST00000465934 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
CACNA1C-224ENST00000465934 PPP2R1AP30153 589 aa18.93■□□□□ 0.62
CACNA1C-224ENST00000465934 RTCBQ9Y3I0 505 aaKnown RBP18.93■□□□□ 0.62
CACNA1C-224ENST00000465934 CNTNAP4Q9C0A0 1308 aa18.93■□□□□ 0.62
CACNA1C-224ENST00000465934 MRC1P22897 1456 aa18.92■□□□□ 0.62
CACNA1C-224ENST00000465934 SLC39A6Q13433 755 aa18.92■□□□□ 0.62
CACNA1C-224ENST00000465934 RC3H1Q5TC82 1133 aaKnown RBP18.91■□□□□ 0.62
CACNA1C-224ENST00000465934 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
CACNA1C-224ENST00000465934 ZNF831Q5JPB2 1677 aa18.9■□□□□ 0.62
CACNA1C-224ENST00000465934 YBX3P16989 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
CACNA1C-224ENST00000465934 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
CACNA1C-224ENST00000465934 TRAPPC3LQ5T215 181 aa18.9■□□□□ 0.62
CACNA1C-224ENST00000465934 SCN11AQ9UI33 1791 aa18.9■□□□□ 0.62
CACNA1C-224ENST00000465934 COL5A3P25940 1745 aaPredicted RBP18.89■□□□□ 0.61
CACNA1C-224ENST00000465934 RPS6KA4O75676 772 aa18.89■□□□□ 0.61
CACNA1C-224ENST00000465934 PHACTR3Q96KR7 559 aa18.89■□□□□ 0.61
CACNA1C-224ENST00000465934 CFAP53Q96M91 514 aa18.89■□□□□ 0.61
CACNA1C-224ENST00000465934 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.61
CACNA1C-224ENST00000465934 MMP10P09238 476 aa18.88■□□□□ 0.61
CACNA1C-224ENST00000465934 DNAJC10Q8IXB1 793 aa18.88■□□□□ 0.61
CACNA1C-224ENST00000465934 RSPH6AQ9H0K4 717 aa18.88■□□□□ 0.61
CACNA1C-224ENST00000465934 ADRA2BP18089 450 aa18.87■□□□□ 0.61
CACNA1C-224ENST00000465934 PRKAR2BP31323 418 aa18.87■□□□□ 0.61
CACNA1C-224ENST00000465934 TJP1Q07157 1748 aa18.87■□□□□ 0.61
CACNA1C-224ENST00000465934 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
CACNA1C-224ENST00000465934 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
CACNA1C-224ENST00000465934 ADAMTS7Q9UKP4 1686 aa18.87■□□□□ 0.61
CACNA1C-224ENST00000465934 KCPQ6ZWJ8 1503 aa18.86■□□□□ 0.61
CACNA1C-224ENST00000465934 GYS1P13807 737 aa18.86■□□□□ 0.61
CACNA1C-224ENST00000465934 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
CACNA1C-224ENST00000465934 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
CACNA1C-224ENST00000465934 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
CACNA1C-224ENST00000465934 RFC4P35249 363 aa18.85■□□□□ 0.61
CACNA1C-224ENST00000465934 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
CACNA1C-224ENST00000465934 SRP68Q9UHB9 627 aaKnown RBP18.85■□□□□ 0.61
CACNA1C-224ENST00000465934 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
CACNA1C-224ENST00000465934 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
CACNA1C-224ENST00000465934 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
CACNA1C-224ENST00000465934 CICQ96RK0 1608 aaPredicted RBP18.83■□□□□ 0.61
CACNA1C-224ENST00000465934 CYP19A1P11511 503 aaPredicted RBP18.83■□□□□ 0.6
CACNA1C-224ENST00000465934 NLGN1Q8N2Q7 840 aa18.83■□□□□ 0.6
CACNA1C-224ENST00000465934 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
CACNA1C-224ENST00000465934 CCDC87Q9NVE4 849 aa18.82■□□□□ 0.6
CACNA1C-224ENST00000465934 USP42Q9H9J4 1324 aaKnown RBP18.81■□□□□ 0.6
CACNA1C-224ENST00000465934 TEFQ10587 303 aa18.81■□□□□ 0.6
CACNA1C-224ENST00000465934 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
CACNA1C-224ENST00000465934 SOS1Q07889 1333 aaPredicted RBP18.8■□□□□ 0.6
CACNA1C-224ENST00000465934 FKBP8Q14318 412 aa18.8■□□□□ 0.6
CACNA1C-224ENST00000465934 ZBTB1Q9Y2K1 713 aa18.8■□□□□ 0.6
CACNA1C-224ENST00000465934 CEMIPQ8WUJ3 1361 aa18.8■□□□□ 0.6
CACNA1C-224ENST00000465934 GRIN3BO60391 1043 aa18.79■□□□□ 0.6
CACNA1C-224ENST00000465934 ZNF496Q96IT1 587 aaPredicted RBP18.79■□□□□ 0.6
CACNA1C-224ENST00000465934 C10orf71Q711Q0 1435 aa18.78■□□□□ 0.6
CACNA1C-224ENST00000465934 FCHSD2O94868 740 aa18.78■□□□□ 0.6
CACNA1C-224ENST00000465934 ZNF790Q6PG37 636 aa18.78■□□□□ 0.6
CACNA1C-224ENST00000465934 TTC5Q8N0Z6 440 aa18.78■□□□□ 0.6
CACNA1C-224ENST00000465934 VSIG10Q8N0Z9 540 aa18.78■□□□□ 0.6
CACNA1C-224ENST00000465934 PXDNLA1KZ92 1463 aa18.77■□□□□ 0.6
CACNA1C-224ENST00000465934 KCNQ3O43525 872 aa18.77■□□□□ 0.6
CACNA1C-224ENST00000465934 DDR1Q08345 913 aa18.77■□□□□ 0.6
CACNA1C-224ENST00000465934 MCM10Q7L590 875 aa18.77■□□□□ 0.6
CACNA1C-224ENST00000465934 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
CACNA1C-224ENST00000465934 PARP3Q9Y6F1 533 aa18.76■□□□□ 0.59
CACNA1C-224ENST00000465934 VIRMAQ69YN4 1812 aaKnown RBP18.76■□□□□ 0.59
CACNA1C-224ENST00000465934 UBR2Q8IWV8 1755 aa18.76■□□□□ 0.59
CACNA1C-224ENST00000465934 A0A0G2JLW4 131 aa18.75■□□□□ 0.59
CACNA1C-224ENST00000465934 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
CACNA1C-224ENST00000465934 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
CACNA1C-224ENST00000465934 COL15A1P39059 1388 aa18.75■□□□□ 0.59
CACNA1C-224ENST00000465934 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms