RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 NINLQ9Y2I6 1382 aa10.5□□□□□ -0.73
VPS8-218ENST00000465818 ANKRD26Q9UPS8 1709 aa10.5□□□□□ -0.73
VPS8-218ENST00000465818 CD163L1Q9NR16 1453 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 NDUFV2P19404 249 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 NUDT18Q6ZVK8 323 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 C19orf44Q9H6X5 657 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 BCL2L12Q9HB09 334 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 PCDHB15Q9Y5E8 787 aa10.49□□□□□ -0.73
VPS8-218ENST00000465818 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
VPS8-218ENST00000465818 RAD21O60216 631 aa10.48□□□□□ -0.73
VPS8-218ENST00000465818 ATF3P18847 181 aa10.48□□□□□ -0.73
VPS8-218ENST00000465818 NUDT16Q96DE0 195 aaKnown RBP10.48□□□□□ -0.73
VPS8-218ENST00000465818 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
VPS8-218ENST00000465818 PUS7Q96PZ0 661 aaKnown RBP10.47□□□□□ -0.73
VPS8-218ENST00000465818 ZSWIM6Q9HCJ5 1215 aa10.47□□□□□ -0.73
VPS8-218ENST00000465818 A0A1W2PP64 1363 aa10.47□□□□□ -0.73
VPS8-218ENST00000465818 LILRB3O75022 631 aa10.46□□□□□ -0.73
VPS8-218ENST00000465818 CSPP1Q1MSJ5 1256 aa10.46□□□□□ -0.73
VPS8-218ENST00000465818 TMEM259Q4ZIN3 620 aa10.46□□□□□ -0.73
VPS8-218ENST00000465818 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.73
VPS8-218ENST00000465818 TMC1Q8TDI8 760 aa10.46□□□□□ -0.73
VPS8-218ENST00000465818 GDPD2Q9HCC8 539 aa10.46□□□□□ -0.73
VPS8-218ENST00000465818 ANKRD36BQ8N2N9 1353 aa10.46□□□□□ -0.74
VPS8-218ENST00000465818 PIK3C2AO00443 1686 aa10.46□□□□□ -0.74
VPS8-218ENST00000465818 MARF1Q9Y4F3 1742 aaKnown RBP10.45□□□□□ -0.74
VPS8-218ENST00000465818 NSD3Q9BZ95 1437 aa10.45□□□□□ -0.74
VPS8-218ENST00000465818 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
VPS8-218ENST00000465818 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
VPS8-218ENST00000465818 TATDN2Q93075 761 aa10.45□□□□□ -0.74
VPS8-218ENST00000465818 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
VPS8-218ENST00000465818 USP54Q70EL1 1684 aa10.44□□□□□ -0.74
VPS8-218ENST00000465818 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
VPS8-218ENST00000465818 CPSF1Q10570 1443 aaKnown RBP10.44□□□□□ -0.74
VPS8-218ENST00000465818 POLR3AO14802 1390 aaPredicted RBP10.44□□□□□ -0.74
VPS8-218ENST00000465818 SMAPO00193 183 aa10.44□□□□□ -0.74
VPS8-218ENST00000465818 PDIA4P13667 645 aaKnown RBP10.44□□□□□ -0.74
VPS8-218ENST00000465818 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
VPS8-218ENST00000465818 SLC12A5Q9H2X9 1139 aa10.44□□□□□ -0.74
VPS8-218ENST00000465818 SERPINA10Q9UK55 444 aa10.44□□□□□ -0.74
VPS8-218ENST00000465818 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
VPS8-218ENST00000465818 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
VPS8-218ENST00000465818 AHDC1Q5TGY3 1603 aaPredicted RBP10.44□□□□□ -0.74
VPS8-218ENST00000465818 USP6P35125 1406 aa10.43□□□□□ -0.74
VPS8-218ENST00000465818 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
VPS8-218ENST00000465818 DNAJB2P25686 324 aa10.43□□□□□ -0.74
VPS8-218ENST00000465818 CABLES1Q8TDN4 633 aa10.43□□□□□ -0.74
VPS8-218ENST00000465818 CABP1Q9NZU7 370 aa10.43□□□□□ -0.74
VPS8-218ENST00000465818 PXDNQ92626 1479 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 EDC4Q6P2E9 1401 aaKnown RBP10.42□□□□□ -0.74
VPS8-218ENST00000465818 KTN1Q86UP2 1357 aaKnown RBP10.42□□□□□ -0.74
VPS8-218ENST00000465818 ABCA3Q99758 1704 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 POM121CA8CG34 1229 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 ESCO1Q5FWF5 840 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
VPS8-218ENST00000465818 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
VPS8-218ENST00000465818 COL16A1Q07092 1604 aaPredicted RBP10.41□□□□□ -0.74
VPS8-218ENST00000465818 ACEP12821 1306 aa10.41□□□□□ -0.74
VPS8-218ENST00000465818 HDGFL2Q7Z4V5 671 aaPredicted RBP10.41□□□□□ -0.74
VPS8-218ENST00000465818 PANK3Q9H999 370 aa10.41□□□□□ -0.74
VPS8-218ENST00000465818 TERF2IPQ9NYB0 399 aa10.41□□□□□ -0.74
VPS8-218ENST00000465818 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
VPS8-218ENST00000465818 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.74
VPS8-218ENST00000465818 GJA5P36382 358 aa10.4□□□□□ -0.74
VPS8-218ENST00000465818 BRINP3Q76B58 766 aa10.4□□□□□ -0.74
VPS8-218ENST00000465818 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
VPS8-218ENST00000465818 SULF1Q8IWU6 871 aa10.4□□□□□ -0.74
VPS8-218ENST00000465818 NGDNQ8NEJ9 315 aaKnown RBP10.4□□□□□ -0.74
VPS8-218ENST00000465818 CCDC97Q96F63 343 aaPredicted RBP10.4□□□□□ -0.74
VPS8-218ENST00000465818 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
VPS8-218ENST00000465818 SSH2Q76I76 1423 aa10.4□□□□□ -0.75
VPS8-218ENST00000465818 GPR37L1O60883 481 aa10.39□□□□□ -0.75
VPS8-218ENST00000465818 PTPREP23469 700 aa10.39□□□□□ -0.75
VPS8-218ENST00000465818 GJD4Q96KN9 370 aaPredicted RBP10.39□□□□□ -0.75
VPS8-218ENST00000465818 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
VPS8-218ENST00000465818 MED1Q15648 1581 aaPredicted RBP10.39□□□□□ -0.75
VPS8-218ENST00000465818 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
VPS8-218ENST00000465818 UBAP1LF5GYI3 381 aa10.38□□□□□ -0.75
VPS8-218ENST00000465818 SOCS7O14512 581 aa10.38□□□□□ -0.75
VPS8-218ENST00000465818 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
VPS8-218ENST00000465818 DDX17Q92841 729 aaKnown RBP10.38□□□□□ -0.75
VPS8-218ENST00000465818 HLA-CQ95604 372 aa10.38□□□□□ -0.75
VPS8-218ENST00000465818 PCDHGC3Q9UN70 934 aa10.38□□□□□ -0.75
VPS8-218ENST00000465818 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 OVOS2A0A0J9YW53 1432 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 FOXO3O43524 673 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 AP1G2O75843 785 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 USP17L8P0C7I0 530 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
VPS8-218ENST00000465818 TNS3Q68CZ2 1445 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 OVOS2Q6IE36 1432 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 LTN1O94822 1766 aa10.37□□□□□ -0.75
VPS8-218ENST00000465818 TOM1O60784 492 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 SLC10A3P09131 477 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms