RNA–Protein interactions for RNA: ENST00000465709.5

SUSD3-203, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-203ENST00000465709 RAPGEF4Q8WZA2 1011 aa21.5■■□□□ 1.03
SUSD3-203ENST00000465709 PCDH11XQ9BZA7 1347 aa21.5■■□□□ 1.03
SUSD3-203ENST00000465709 PCDH11YQ9BZA8 1340 aa21.5■■□□□ 1.03
SUSD3-203ENST00000465709 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
SUSD3-203ENST00000465709 SBNO2Q9Y2G9 1366 aa21.49■■□□□ 1.03
SUSD3-203ENST00000465709 PARP3Q9Y6F1 533 aa21.49■■□□□ 1.03
SUSD3-203ENST00000465709 LOC102724428A0A0B4J2F2 783 aa21.48■■□□□ 1.03
SUSD3-203ENST00000465709 CCDC85CA6NKD9 419 aa21.48■■□□□ 1.03
SUSD3-203ENST00000465709 SIK1P57059 783 aa21.48■■□□□ 1.03
SUSD3-203ENST00000465709 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
SUSD3-203ENST00000465709 RGS19P49795 217 aa21.47■■□□□ 1.03
SUSD3-203ENST00000465709 TATP17735 454 aaPredicted RBP21.45■■□□□ 1.02
SUSD3-203ENST00000465709 HOXC9P31274 260 aa21.45■■□□□ 1.02
SUSD3-203ENST00000465709 AMPHP49418 695 aa21.45■■□□□ 1.02
SUSD3-203ENST00000465709 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
SUSD3-203ENST00000465709 TIAM2Q8IVF5 1701 aa21.44■■□□□ 1.02
SUSD3-203ENST00000465709 TRAPPC3LQ5T215 181 aa21.44■■□□□ 1.02
SUSD3-203ENST00000465709 RASSF7Q02833 373 aa21.43■■□□□ 1.02
SUSD3-203ENST00000465709 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
SUSD3-203ENST00000465709 PIGBQ92521 554 aa21.43■■□□□ 1.02
SUSD3-203ENST00000465709 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
SUSD3-203ENST00000465709 KDM6AO15550 1401 aaPredicted RBP21.43■■□□□ 1.02
SUSD3-203ENST00000465709 EDC4Q6P2E9 1401 aaKnown RBP21.43■■□□□ 1.02
SUSD3-203ENST00000465709 CD163L1Q9NR16 1453 aa21.43■■□□□ 1.02
SUSD3-203ENST00000465709 LMNB1P20700 586 aa21.42■■□□□ 1.02
SUSD3-203ENST00000465709 ATP6V1AP38606 617 aa21.42■■□□□ 1.02
SUSD3-203ENST00000465709 ITPK1Q13572 414 aa21.42■■□□□ 1.02
SUSD3-203ENST00000465709 MAP3K19Q56UN5 1328 aa21.42■■□□□ 1.02
SUSD3-203ENST00000465709 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
SUSD3-203ENST00000465709 WBP1LQ9NX94 342 aa21.42■■□□□ 1.02
SUSD3-203ENST00000465709 NBPF6Q5VWK0 638 aa21.41■■□□□ 1.02
SUSD3-203ENST00000465709 NBPF4Q96M43 638 aa21.41■■□□□ 1.02
SUSD3-203ENST00000465709 CHADLQ6NUI6 762 aa21.4■■□□□ 1.02
SUSD3-203ENST00000465709 PDE4DIPQ5VU43 2346 aa21.4■■□□□ 1.02
SUSD3-203ENST00000465709 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
SUSD3-203ENST00000465709 HSPA8P11142 646 aaKnown RBP21.39■■□□□ 1.01
SUSD3-203ENST00000465709 GYS1P13807 737 aa21.39■■□□□ 1.01
SUSD3-203ENST00000465709 CCDC88AQ3V6T2 1871 aa21.39■■□□□ 1.01
SUSD3-203ENST00000465709 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
SUSD3-203ENST00000465709 CYP27B1O15528 508 aa21.38■■□□□ 1.01
SUSD3-203ENST00000465709 VEGFBP49765 207 aa21.38■■□□□ 1.01
SUSD3-203ENST00000465709 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
SUSD3-203ENST00000465709 ADRA2BP18089 450 aa21.37■■□□□ 1.01
SUSD3-203ENST00000465709 CHRNA5P30532 468 aa21.37■■□□□ 1.01
SUSD3-203ENST00000465709 RFC4P35249 363 aa21.37■■□□□ 1.01
SUSD3-203ENST00000465709 POTECB2RU33 542 aa21.36■■□□□ 1.01
SUSD3-203ENST00000465709 DPY19L2Q6NUT2 758 aa21.36■■□□□ 1.01
SUSD3-203ENST00000465709 ARHGEF1Q92888 912 aaKnown RBP21.36■■□□□ 1.01
SUSD3-203ENST00000465709 CFAP44Q96MT7 982 aa21.35■■□□□ 1.01
SUSD3-203ENST00000465709 RTL1A6NKG5 1358 aa21.35■■□□□ 1.01
SUSD3-203ENST00000465709 TMOD3Q9NYL9 352 aa21.34■■□□□ 1.01
SUSD3-203ENST00000465709 COG3Q96JB2 828 aa21.33■■□□□ 1.01
SUSD3-203ENST00000465709 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
SUSD3-203ENST00000465709 TERF2IPQ9NYB0 399 aa21.32■■□□□ 1
SUSD3-203ENST00000465709 MAP2K1Q02750 393 aaPredicted RBP21.31■■□□□ 1
SUSD3-203ENST00000465709 TNRC18O15417 2968 aaPredicted RBP21.3■■□□□ 1
SUSD3-203ENST00000465709 TMEM88BA6NKF7 163 aa21.3■■□□□ 1
SUSD3-203ENST00000465709 FBLN1P23142 703 aa21.3■■□□□ 1
SUSD3-203ENST00000465709 A0A1W2PP64 1363 aa21.3■■□□□ 1
SUSD3-203ENST00000465709 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
SUSD3-203ENST00000465709 PASKQ96RG2 1323 aa21.29■■□□□ 1
SUSD3-203ENST00000465709 POTEIP0CG38 1075 aa21.28■■□□□ 1
SUSD3-203ENST00000465709 POTEJP0CG39 1038 aa21.28■■□□□ 1
SUSD3-203ENST00000465709 NKX1-1Q15270 411 aaPredicted RBP21.28■■□□□ 1
SUSD3-203ENST00000465709 DDR1Q08345 913 aa21.27■■□□□ 1
SUSD3-203ENST00000465709 RC3H1Q5TC82 1133 aaKnown RBP21.27■■□□□ 1
SUSD3-203ENST00000465709 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
SUSD3-203ENST00000465709 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
SUSD3-203ENST00000465709 ATG3Q9NT62 314 aa21.26■□□□□ 0.99
SUSD3-203ENST00000465709 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
SUSD3-203ENST00000465709 KDRP35968 1356 aa21.25■□□□□ 0.99
SUSD3-203ENST00000465709 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
SUSD3-203ENST00000465709 ROCK2O75116 1388 aaKnown RBP21.24■□□□□ 0.99
SUSD3-203ENST00000465709 RRS1Q15050 365 aaKnown RBP21.24■□□□□ 0.99
SUSD3-203ENST00000465709 DICER1Q9UPY3 1922 aaKnown RBP21.23■□□□□ 0.99
SUSD3-203ENST00000465709 DLEC1Q9Y238 1755 aa21.23■□□□□ 0.99
SUSD3-203ENST00000465709 FKBP8Q14318 412 aa21.23■□□□□ 0.99
SUSD3-203ENST00000465709 DEFB115Q30KQ5 88 aa21.23■□□□□ 0.99
SUSD3-203ENST00000465709 LDHDQ86WU2 507 aa21.23■□□□□ 0.99
SUSD3-203ENST00000465709 BEGAINQ9BUH8 593 aa21.23■□□□□ 0.99
SUSD3-203ENST00000465709 SPG7Q9UQ90 795 aa21.23■□□□□ 0.99
SUSD3-203ENST00000465709 NFKBIEO00221 500 aa21.22■□□□□ 0.99
SUSD3-203ENST00000465709 ERFEQ4G0M1 354 aa21.22■□□□□ 0.99
SUSD3-203ENST00000465709 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
SUSD3-203ENST00000465709 RASSF10A6NK89 507 aa21.21■□□□□ 0.99
SUSD3-203ENST00000465709 TTLL6Q8N841 843 aa21.21■□□□□ 0.99
SUSD3-203ENST00000465709 SRP68Q9UHB9 627 aaKnown RBP21.21■□□□□ 0.99
SUSD3-203ENST00000465709 WDR33Q9C0J8 1336 aaKnown RBP21.21■□□□□ 0.99
SUSD3-203ENST00000465709 MYH14Q7Z406 1995 aaKnown RBP21.21■□□□□ 0.99
SUSD3-203ENST00000465709 POLRMTO00411 1230 aaKnown RBP21.2■□□□□ 0.98
SUSD3-203ENST00000465709 USP42Q9H9J4 1324 aaKnown RBP21.2■□□□□ 0.98
SUSD3-203ENST00000465709 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
SUSD3-203ENST00000465709 INSRP06213 1382 aa21.19■□□□□ 0.98
SUSD3-203ENST00000465709 SLC4A9Q96Q91 983 aa21.18■□□□□ 0.98
SUSD3-203ENST00000465709 DDNO94850 711 aaPredicted RBP21.17■□□□□ 0.98
SUSD3-203ENST00000465709 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
SUSD3-203ENST00000465709 SCN4AP35499 1836 aa21.16■□□□□ 0.98
SUSD3-203ENST00000465709 ITGBL1O95965 494 aaPredicted RBP21.16■□□□□ 0.98
SUSD3-203ENST00000465709 MCOLN1Q9GZU1 580 aa21.16■□□□□ 0.98
SUSD3-203ENST00000465709 ABT1Q9ULW3 272 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms