RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	SLFN5	Q08AF3	891 aa		12.55	□□□□□ -0.4
TRIM5-208	ENST00000465634	TRMT2A	Q8IZ69	625 aa	Known RBP	12.55	□□□□□ -0.4
TRIM5-208	ENST00000465634	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.55	□□□□□ -0.4
TRIM5-208	ENST00000465634	PIGB	Q92521	554 aa		12.54	□□□□□ -0.4
TRIM5-208	ENST00000465634	SYTL4	Q96C24	671 aa	Predicted RBP	12.54	□□□□□ -0.4
TRIM5-208	ENST00000465634	TSPYL4	Q9UJ04	414 aa		12.54	□□□□□ -0.4
TRIM5-208	ENST00000465634	SCN11A	Q9UI33	1791 aa		12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	FAM182B	Q5T319	152 aa		12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	ZNF790	Q6PG37	636 aa		12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	TTC5	Q8N0Z6	440 aa		12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	SMARCC1	Q92922	1105 aa	Predicted RBP	12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	ACSBG1	Q96GR2	724 aa		12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	LAS1L	Q9Y4W2	734 aa	Known RBP	12.53	□□□□□ -0.4
TRIM5-208	ENST00000465634	KCNQ2	O43526	872 aa		12.52	□□□□□ -0.41
TRIM5-208	ENST00000465634	HMGB2	P26583	209 aa	Known RBP	12.52	□□□□□ -0.41
TRIM5-208	ENST00000465634	CHMP4A	Q9BY43	222 aa		12.52	□□□□□ -0.41
TRIM5-208	ENST00000465634	MBIP	Q9NS73	344 aa		12.52	□□□□□ -0.41
TRIM5-208	ENST00000465634	SOS1	Q07889	1333 aa	Predicted RBP	12.52	□□□□□ -0.41
TRIM5-208	ENST00000465634	BRWD3	Q6RI45	1802 aa		12.51	□□□□□ -0.41
TRIM5-208	ENST00000465634	DUSP27	Q5VZP5	1158 aa		12.51	□□□□□ -0.41
TRIM5-208	ENST00000465634	CDCA7L	Q96GN5	454 aa		12.51	□□□□□ -0.41
TRIM5-208	ENST00000465634	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.51	□□□□□ -0.41
TRIM5-208	ENST00000465634	MIS18A	Q9NYP9	233 aa		12.51	□□□□□ -0.41
TRIM5-208	ENST00000465634	CT47B1	P0C2W7	299 aa	Predicted RBP	12.5	□□□□□ -0.41
TRIM5-208	ENST00000465634	CCDC125	Q86Z20	511 aa		12.5	□□□□□ -0.41
TRIM5-208	ENST00000465634	VSIG10	Q8N0Z9	540 aa		12.5	□□□□□ -0.41
TRIM5-208	ENST00000465634	FMNL2	Q96PY5	1086 aa		12.5	□□□□□ -0.41
TRIM5-208	ENST00000465634	ATG3	Q9NT62	314 aa		12.5	□□□□□ -0.41
TRIM5-208	ENST00000465634	FANCI	Q9NVI1	1328 aa		12.5	□□□□□ -0.41
TRIM5-208	ENST00000465634	TOGARAM1	Q9Y4F4	1720 aa		12.49	□□□□□ -0.41
TRIM5-208	ENST00000465634	TRIM37	O94972	964 aa		12.49	□□□□□ -0.41
TRIM5-208	ENST00000465634	HOXB7	P09629	217 aa		12.49	□□□□□ -0.41
TRIM5-208	ENST00000465634	EIF4A1	P60842	406 aa	Known RBP	12.49	□□□□□ -0.41
TRIM5-208	ENST00000465634	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.49	□□□□□ -0.41
TRIM5-208	ENST00000465634	ASAP1	Q9ULH1	1129 aa		12.49	□□□□□ -0.41
TRIM5-208	ENST00000465634	DOT1L	Q8TEK3	1739 aa		12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	NHS	Q6T4R5	1651 aa		12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	HEG1	Q9ULI3	1381 aa		12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	PLSCR1	O15162	318 aa		12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	SLC39A6	Q13433	755 aa		12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	TSR2	Q969E8	191 aa	Known RBP	12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	ZNF428	Q96B54	188 aa		12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	SIPA1L3	O60292	1781 aa	Predicted RBP	12.48	□□□□□ -0.41
TRIM5-208	ENST00000465634	SNRPA1	P09661	255 aa	Known RBP	12.47	□□□□□ -0.41
TRIM5-208	ENST00000465634	ZNF496	Q96IT1	587 aa	Predicted RBP	12.47	□□□□□ -0.41
TRIM5-208	ENST00000465634	PALLD	Q8WX93	1383 aa		12.46	□□□□□ -0.41
TRIM5-208	ENST00000465634	KCNQ3	O43525	872 aa		12.46	□□□□□ -0.41
TRIM5-208	ENST00000465634	GIGYF1	O75420	1035 aa	Predicted RBP	12.46	□□□□□ -0.41
TRIM5-208	ENST00000465634	EXOSC9	Q06265	439 aa	Known RBP	12.46	□□□□□ -0.41
TRIM5-208	ENST00000465634	SF3B2	Q13435	895 aa	Known RBP	12.46	□□□□□ -0.41
TRIM5-208	ENST00000465634	ITGB4	P16144	1822 aa		12.46	□□□□□ -0.42
TRIM5-208	ENST00000465634	LOC102724428	A0A0B4J2F2	783 aa		12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	PTCD1	O75127	700 aa	Known RBP	12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	APBA3	O96018	575 aa		12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	SIK1	P57059	783 aa		12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	TWISTNB	Q3B726	338 aa	Predicted RBP	12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	SLC27A3	Q5K4L6	730 aa		12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	PTF1A	Q7RTS3	328 aa		12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	C8orf58	Q8NAV2	365 aa		12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	RBM42	Q9BTD8	480 aa	Known RBP	12.45	□□□□□ -0.42
TRIM5-208	ENST00000465634	PAPPA	Q13219	1627 aa		12.44	□□□□□ -0.42
TRIM5-208	ENST00000465634	VIRMA	Q69YN4	1812 aa	Known RBP	12.44	□□□□□ -0.42
TRIM5-208	ENST00000465634	SBF2	Q86WG5	1849 aa		12.44	□□□□□ -0.42
TRIM5-208	ENST00000465634	KDM3B	Q7LBC6	1761 aa		12.44	□□□□□ -0.42
TRIM5-208	ENST00000465634	VAMP4	O75379	141 aa		12.44	□□□□□ -0.42
TRIM5-208	ENST00000465634	KCP	Q6ZWJ8	1503 aa		12.43	□□□□□ -0.42
TRIM5-208	ENST00000465634	STARD3NL	O95772	234 aa		12.43	□□□□□ -0.42
TRIM5-208	ENST00000465634	ATP6V1A	P38606	617 aa		12.43	□□□□□ -0.42
TRIM5-208	ENST00000465634	BAG6	P46379	1132 aa		12.42	□□□□□ -0.42
TRIM5-208	ENST00000465634	CCDC30	Q5VVM6	783 aa		12.42	□□□□□ -0.42
TRIM5-208	ENST00000465634	TSPYL6	Q8N831	410 aa		12.42	□□□□□ -0.42
TRIM5-208	ENST00000465634	ERBB4	Q15303	1308 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	UBR2	Q8IWV8	1755 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	ELL2	O00472	640 aa	Predicted RBP	12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	CENPB	P07199	599 aa	Predicted RBP	12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	KRT24	Q2M2I5	525 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	ALDH1L2	Q3SY69	923 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	SLC4A9	Q96Q91	983 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	CCNL1	Q9UK58	526 aa	Predicted RBP	12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	BTAF1	O14981	1849 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	ZNF831	Q5JPB2	1677 aa		12.41	□□□□□ -0.42
TRIM5-208	ENST00000465634	CYP19A1	P11511	503 aa	Predicted RBP	12.4	□□□□□ -0.42
TRIM5-208	ENST00000465634	BRPF1	P55201	1214 aa	Predicted RBP	12.4	□□□□□ -0.42
TRIM5-208	ENST00000465634	TXNRD1	Q16881	649 aa		12.4	□□□□□ -0.42
TRIM5-208	ENST00000465634	RC3H1	Q5TC82	1133 aa	Known RBP	12.4	□□□□□ -0.42
TRIM5-208	ENST00000465634	HDGFL1	Q5TGJ6	251 aa		12.4	□□□□□ -0.42
TRIM5-208	ENST00000465634	USP16	Q9Y5T5	823 aa		12.4	□□□□□ -0.42
TRIM5-208	ENST00000465634	DNAJC10	Q8IXB1	793 aa		12.39	□□□□□ -0.43
TRIM5-208	ENST00000465634	CAMKK2	Q96RR4	588 aa		12.39	□□□□□ -0.43
TRIM5-208	ENST00000465634	STK31	Q9BXU1	1019 aa		12.39	□□□□□ -0.43
TRIM5-208	ENST00000465634	DBF4	Q9UBU7	674 aa	Predicted RBP	12.39	□□□□□ -0.43
TRIM5-208	ENST00000465634	KAT6B	Q8WYB5	2073 aa		12.39	□□□□□ -0.43
TRIM5-208	ENST00000465634	CIC	Q96RK0	1608 aa	Predicted RBP	12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	PRAMEF22	A3QJZ6	481 aa		12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	EIF2S2	P20042	333 aa	Known RBP	12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	RARS	P54136	660 aa	Known RBP	12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	ITPK1	Q13572	414 aa		12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	PROM2	Q8N271	834 aa		12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.38	□□□□□ -0.43
TRIM5-208	ENST00000465634	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms