RNA–Protein interactions for RNA: ENST00000465344.1

NUP188-203, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 400 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-203ENST00000465344 C8orf37Q96NL8 207 aa8.36□□□□□ -1.07
NUP188-203ENST00000465344 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
NUP188-203ENST00000465344 QTRT2Q9H974 415 aaKnown RBP8.36□□□□□ -1.07
NUP188-203ENST00000465344 SETD5Q9C0A6 1442 aa8.36□□□□□ -1.07
NUP188-203ENST00000465344 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
NUP188-203ENST00000465344 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 PHLPP1O60346 1717 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 SPHKAPQ2M3C7 1700 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 ADAMTS2O95450 1211 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
NUP188-203ENST00000465344 USP46P62068 366 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 LAPTM4AQ15012 233 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 WAPLQ7Z5K2 1190 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 CLTCL1P53675 1640 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 MST1RQ04912 1400 aa8.35□□□□□ -1.07
NUP188-203ENST00000465344 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.34□□□□□ -1.07
NUP188-203ENST00000465344 NEXMIFQ5QGS0 1516 aa8.34□□□□□ -1.07
NUP188-203ENST00000465344 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
NUP188-203ENST00000465344 FOXO3O43524 673 aa8.34□□□□□ -1.07
NUP188-203ENST00000465344 AFF2P51816 1311 aa8.33□□□□□ -1.08
NUP188-203ENST00000465344 NPHP3Q7Z494 1330 aa8.33□□□□□ -1.08
NUP188-203ENST00000465344 C1orf167Q5SNV9 1468 aa8.33□□□□□ -1.08
NUP188-203ENST00000465344 FAM160A2Q8N612 972 aaPredicted RBP8.33□□□□□ -1.08
NUP188-203ENST00000465344 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
NUP188-203ENST00000465344 C14orf93Q9H972 538 aaKnown RBP8.33□□□□□ -1.08
NUP188-203ENST00000465344 POGKQ9P215 609 aa8.33□□□□□ -1.08
NUP188-203ENST00000465344 LRPPRCP42704 1394 aaKnown RBP8.33□□□□□ -1.08
NUP188-203ENST00000465344 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
NUP188-203ENST00000465344 PTCH1Q13635 1447 aa8.32□□□□□ -1.08
NUP188-203ENST00000465344 SLC19A1P41440 591 aa8.32□□□□□ -1.08
NUP188-203ENST00000465344 RBM6P78332 1123 aaKnown RBP8.32□□□□□ -1.08
NUP188-203ENST00000465344 Q3C1V9 767 aa8.32□□□□□ -1.08
NUP188-203ENST00000465344 MSS51Q4VC12 460 aa8.32□□□□□ -1.08
NUP188-203ENST00000465344 ASXL1Q8IXJ9 1541 aa8.32□□□□□ -1.08
NUP188-203ENST00000465344 DHX57Q6P158 1386 aaKnown RBP8.32□□□□□ -1.08
NUP188-203ENST00000465344 ABCC11Q96J66 1382 aa8.32□□□□□ -1.08
NUP188-203ENST00000465344 HOXA2O43364 376 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 HRCP23327 699 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
NUP188-203ENST00000465344 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
NUP188-203ENST00000465344 PSME1Q06323 249 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 CFAP70Q5T0N1 1121 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 RNF19BQ6ZMZ0 732 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 LIAT1Q6ZQX7 453 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 USP21Q9UK80 565 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 AHDC1Q5TGY3 1603 aaPredicted RBP8.31□□□□□ -1.08
NUP188-203ENST00000465344 PNPLA6Q8IY17 1366 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 KIF1BO60333 1816 aa8.31□□□□□ -1.08
NUP188-203ENST00000465344 SPATA31E1Q6ZUB1 1445 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 COL16A1Q07092 1604 aaPredicted RBP8.3□□□□□ -1.08
NUP188-203ENST00000465344 NRXN3Q9Y4C0 1643 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 GFRA3O60609 400 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 SAFB2Q14151 953 aaKnown RBP eCLIP8.3□□□□□ -1.08
NUP188-203ENST00000465344 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 KRT28Q7Z3Y7 464 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 DCAF11Q8TEB1 546 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 AK7Q96M32 723 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 TRPC5Q9UL62 973 aaPredicted RBP8.3□□□□□ -1.08
NUP188-203ENST00000465344 RAB3GAP2Q9H2M9 1393 aa8.3□□□□□ -1.08
NUP188-203ENST00000465344 LRP6O75581 1613 aa8.29□□□□□ -1.08
NUP188-203ENST00000465344 XRN1Q8IZH2 1706 aaKnown RBP8.29□□□□□ -1.08
NUP188-203ENST00000465344 NRG2O14511 850 aaPredicted RBP8.29□□□□□ -1.08
NUP188-203ENST00000465344 TRIM66O15016 1216 aa8.29□□□□□ -1.08
NUP188-203ENST00000465344 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
NUP188-203ENST00000465344 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
NUP188-203ENST00000465344 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
NUP188-203ENST00000465344 PRAM1Q96QH2 718 aa8.29□□□□□ -1.08
NUP188-203ENST00000465344 YTHDC2Q9H6S0 1430 aaKnown RBP8.28□□□□□ -1.08
NUP188-203ENST00000465344 MMP16P51512 607 aa8.27□□□□□ -1.09
NUP188-203ENST00000465344 TTLL12Q14166 644 aaPredicted RBP8.27□□□□□ -1.09
NUP188-203ENST00000465344 GIGYF2Q6Y7W6 1299 aaKnown RBP8.27□□□□□ -1.09
NUP188-203ENST00000465344 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
NUP188-203ENST00000465344 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
NUP188-203ENST00000465344 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
NUP188-203ENST00000465344 HLA-CQ95604 372 aa8.27□□□□□ -1.09
NUP188-203ENST00000465344 TRAK1Q9UPV9 953 aa8.27□□□□□ -1.09
NUP188-203ENST00000465344 PRAG1Q86YV5 1406 aa8.27□□□□□ -1.09
NUP188-203ENST00000465344 PLEKHH1Q9ULM0 1364 aa8.26□□□□□ -1.09
NUP188-203ENST00000465344 RPIAP49247 311 aa8.26□□□□□ -1.09
NUP188-203ENST00000465344 PARP9Q8IXQ6 854 aa8.26□□□□□ -1.09
NUP188-203ENST00000465344 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
NUP188-203ENST00000465344 PRDM9Q9NQV7 894 aa8.26□□□□□ -1.09
NUP188-203ENST00000465344 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
NUP188-203ENST00000465344 TECPR2O15040 1411 aa8.26□□□□□ -1.09
NUP188-203ENST00000465344 PIK3C2GO75747 1445 aa8.26□□□□□ -1.09
NUP188-203ENST00000465344 PRR20EP86478 221 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 PRR20CP86479 221 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 PRR20DP86480 221 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 PRR20BP86481 221 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 PRR20AP86496 221 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 Q6ZNB5 142 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 PMFBP1Q8TBY8 1022 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 HIRIP3Q9BW71 556 aaPredicted RBP8.25□□□□□ -1.09
NUP188-203ENST00000465344 PDZRN3Q9UPQ7 1066 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 SPATA31A3Q5VYP0 1347 aa8.25□□□□□ -1.09
NUP188-203ENST00000465344 SHPRHQ149N8 1683 aa8.24□□□□□ -1.09
NUP188-203ENST00000465344 DXOO77932 396 aaKnown RBP8.24□□□□□ -1.09
NUP188-203ENST00000465344 GUCA2AQ02747 115 aa8.24□□□□□ -1.09
NUP188-203ENST00000465344 ZNF697Q5TEC3 545 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms