RNA–Protein interactions for RNA: ENST00000465309.6

LMO7-208, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-208ENST00000465309 TAF1LQ8IZX4 1826 aa9.47□□□□□ -0.89
LMO7-208ENST00000465309 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
LMO7-208ENST00000465309 SPATA31E1Q6ZUB1 1445 aa9.47□□□□□ -0.89
LMO7-208ENST00000465309 TOGARAM1Q9Y4F4 1720 aa9.46□□□□□ -0.89
LMO7-208ENST00000465309 NLRP6P59044 892 aa9.46□□□□□ -0.9
LMO7-208ENST00000465309 AK7Q96M32 723 aa9.46□□□□□ -0.9
LMO7-208ENST00000465309 TRAK1Q9UPV9 953 aa9.46□□□□□ -0.9
LMO7-208ENST00000465309 TMEM88BA6NKF7 163 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 MMP10P09238 476 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 POTEIP0CG38 1075 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 POTEJP0CG39 1038 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 IL2RBP14784 551 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 RASSF7Q02833 373 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 GRM1Q13255 1194 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 AMIGO3Q86WK7 504 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 SLC17A8Q8NDX2 589 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 NLRP2Q9NX02 1062 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 WDR33Q9C0J8 1336 aaKnown RBP9.45□□□□□ -0.9
LMO7-208ENST00000465309 POLR3AO14802 1390 aaPredicted RBP9.45□□□□□ -0.9
LMO7-208ENST00000465309 SLIT3O75094 1523 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 UBR3Q6ZT12 1888 aa9.45□□□□□ -0.9
LMO7-208ENST00000465309 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
LMO7-208ENST00000465309 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
LMO7-208ENST00000465309 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
LMO7-208ENST00000465309 C14orf93Q9H972 538 aaKnown RBP9.44□□□□□ -0.9
LMO7-208ENST00000465309 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
LMO7-208ENST00000465309 USP47Q96K76 1375 aa9.44□□□□□ -0.9
LMO7-208ENST00000465309 C4BP0C0L5 1744 aa9.44□□□□□ -0.9
LMO7-208ENST00000465309 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
LMO7-208ENST00000465309 CCDC88AQ3V6T2 1871 aa9.43□□□□□ -0.9
LMO7-208ENST00000465309 NSD2O96028 1365 aa9.43□□□□□ -0.9
LMO7-208ENST00000465309 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
LMO7-208ENST00000465309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
LMO7-208ENST00000465309 POTECB2RU33 542 aa9.43□□□□□ -0.9
LMO7-208ENST00000465309 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
LMO7-208ENST00000465309 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
LMO7-208ENST00000465309 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
LMO7-208ENST00000465309 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
LMO7-208ENST00000465309 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
LMO7-208ENST00000465309 ABT1Q9ULW3 272 aaKnown RBP9.42□□□□□ -0.9
LMO7-208ENST00000465309 LTBP1Q14766 1721 aa9.42□□□□□ -0.9
LMO7-208ENST00000465309 PASKQ96RG2 1323 aa9.41□□□□□ -0.9
LMO7-208ENST00000465309 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
LMO7-208ENST00000465309 FXR1P51114 621 aaKnown RBP eCLIP9.41□□□□□ -0.9
LMO7-208ENST00000465309 CCDC87Q9NVE4 849 aa9.4□□□□□ -0.9
LMO7-208ENST00000465309 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
LMO7-208ENST00000465309 RASSF10A6NK89 507 aa9.39□□□□□ -0.91
LMO7-208ENST00000465309 LMNB1P20700 586 aa9.39□□□□□ -0.91
LMO7-208ENST00000465309 KCNA3P22001 575 aa9.39□□□□□ -0.91
LMO7-208ENST00000465309 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
LMO7-208ENST00000465309 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
LMO7-208ENST00000465309 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
LMO7-208ENST00000465309 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
LMO7-208ENST00000465309 REM2Q8IYK8 340 aaPredicted RBP9.38□□□□□ -0.91
LMO7-208ENST00000465309 CDK19Q9BWU1 502 aa9.38□□□□□ -0.91
LMO7-208ENST00000465309 C4AP0C0L4 1744 aa9.37□□□□□ -0.91
LMO7-208ENST00000465309 A0A0C4DFX4 3053 aa9.37□□□□□ -0.91
LMO7-208ENST00000465309 CAPNS2Q96L46 248 aa9.37□□□□□ -0.91
LMO7-208ENST00000465309 CCDC61Q9Y6R9 512 aa9.37□□□□□ -0.91
LMO7-208ENST00000465309 KDM6AO15550 1401 aaPredicted RBP9.37□□□□□ -0.91
LMO7-208ENST00000465309 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
LMO7-208ENST00000465309 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
LMO7-208ENST00000465309 PLEKHG3A1L390 1219 aa9.36□□□□□ -0.91
LMO7-208ENST00000465309 SSFA2P28290 1259 aa9.36□□□□□ -0.91
LMO7-208ENST00000465309 GPR101Q96P66 508 aaPredicted RBP9.36□□□□□ -0.91
LMO7-208ENST00000465309 CHRNA5P30532 468 aa9.35□□□□□ -0.91
LMO7-208ENST00000465309 CYP4F22Q6NT55 531 aa9.35□□□□□ -0.91
LMO7-208ENST00000465309 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
LMO7-208ENST00000465309 MPNDQ8N594 471 aa9.35□□□□□ -0.91
LMO7-208ENST00000465309 SIN3AQ96ST3 1273 aa9.35□□□□□ -0.91
LMO7-208ENST00000465309 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
LMO7-208ENST00000465309 GNPATO15228 680 aa9.34□□□□□ -0.91
LMO7-208ENST00000465309 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
LMO7-208ENST00000465309 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
LMO7-208ENST00000465309 CLEC11AQ9Y240 323 aa9.34□□□□□ -0.91
LMO7-208ENST00000465309 PARP3Q9Y6F1 533 aa9.34□□□□□ -0.91
LMO7-208ENST00000465309 AOC2O75106 756 aa9.33□□□□□ -0.92
LMO7-208ENST00000465309 ITGBL1O95965 494 aaPredicted RBP9.33□□□□□ -0.92
LMO7-208ENST00000465309 ECE1P42892 770 aa9.33□□□□□ -0.92
LMO7-208ENST00000465309 ERICH6Q7L0X2 663 aa9.33□□□□□ -0.92
LMO7-208ENST00000465309 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
LMO7-208ENST00000465309 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
LMO7-208ENST00000465309 SPDYE2BA6NHP3 402 aa9.32□□□□□ -0.92
LMO7-208ENST00000465309 SPDYE6P0CI01 402 aa9.32□□□□□ -0.92
LMO7-208ENST00000465309 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
LMO7-208ENST00000465309 TMF1P82094 1093 aa9.32□□□□□ -0.92
LMO7-208ENST00000465309 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
LMO7-208ENST00000465309 ANKRD24Q8TF21 1146 aa9.32□□□□□ -0.92
LMO7-208ENST00000465309 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
LMO7-208ENST00000465309 NFAT5O94916 1531 aa9.31□□□□□ -0.92
LMO7-208ENST00000465309 SZT2Q5T011 3432 aa9.31□□□□□ -0.92
LMO7-208ENST00000465309 CA12O43570 354 aa9.31□□□□□ -0.92
LMO7-208ENST00000465309 DDNO94850 711 aaPredicted RBP9.31□□□□□ -0.92
LMO7-208ENST00000465309 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.31□□□□□ -0.92
LMO7-208ENST00000465309 LTN1O94822 1766 aa9.31□□□□□ -0.92
LMO7-208ENST00000465309 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
LMO7-208ENST00000465309 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
LMO7-208ENST00000465309 LINC00116Q8NCU8 138 aa9.3□□□□□ -0.92
LMO7-208ENST00000465309 MPHOSPH9Q99550 1183 aa9.3□□□□□ -0.92
LMO7-208ENST00000465309 DICER1Q9UPY3 1922 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms