RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 ADCY9O60503 1353 aa11.62□□□□□ -0.55
CNIH4-205ENST00000465271 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
CNIH4-205ENST00000465271 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
CNIH4-205ENST00000465271 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
CNIH4-205ENST00000465271 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
CNIH4-205ENST00000465271 MCM10Q7L590 875 aa11.62□□□□□ -0.55
CNIH4-205ENST00000465271 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
CNIH4-205ENST00000465271 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
CNIH4-205ENST00000465271 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
CNIH4-205ENST00000465271 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
CNIH4-205ENST00000465271 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
CNIH4-205ENST00000465271 KRT24Q2M2I5 525 aa11.61□□□□□ -0.55
CNIH4-205ENST00000465271 HOXB7P09629 217 aa11.6□□□□□ -0.55
CNIH4-205ENST00000465271 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
CNIH4-205ENST00000465271 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
CNIH4-205ENST00000465271 THRAP3Q9Y2W1 955 aaKnown RBP11.59□□□□□ -0.55
CNIH4-205ENST00000465271 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
CNIH4-205ENST00000465271 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
CNIH4-205ENST00000465271 UTYO14607 1347 aa11.59□□□□□ -0.55
CNIH4-205ENST00000465271 KCNQ3O43525 872 aa11.59□□□□□ -0.55
CNIH4-205ENST00000465271 TRIM27P14373 513 aa11.58□□□□□ -0.56
CNIH4-205ENST00000465271 CHRNA2Q15822 529 aa11.58□□□□□ -0.56
CNIH4-205ENST00000465271 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
CNIH4-205ENST00000465271 SLC52A2Q9HAB3 445 aa11.58□□□□□ -0.56
CNIH4-205ENST00000465271 AMPHP49418 695 aa11.57□□□□□ -0.56
CNIH4-205ENST00000465271 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
CNIH4-205ENST00000465271 SIRT2Q8IXJ6 389 aa11.57□□□□□ -0.56
CNIH4-205ENST00000465271 GNAI1P63096 354 aa11.57□□□□□ -0.56
CNIH4-205ENST00000465271 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
CNIH4-205ENST00000465271 PAK3O75914 559 aaPredicted RBP11.56□□□□□ -0.56
CNIH4-205ENST00000465271 VPS72Q15906 364 aa11.56□□□□□ -0.56
CNIH4-205ENST00000465271 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
CNIH4-205ENST00000465271 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
CNIH4-205ENST00000465271 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
CNIH4-205ENST00000465271 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
CNIH4-205ENST00000465271 PLIN1O60240 522 aa11.55□□□□□ -0.56
CNIH4-205ENST00000465271 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
CNIH4-205ENST00000465271 MYH16Q9H6N6 1097 aa11.55□□□□□ -0.56
CNIH4-205ENST00000465271 RGS17Q9UGC6 210 aaPredicted RBP11.55□□□□□ -0.56
CNIH4-205ENST00000465271 AKAP11Q9UKA4 1901 aa11.55□□□□□ -0.56
CNIH4-205ENST00000465271 EXOC6Q8TAG9 804 aa11.54□□□□□ -0.56
CNIH4-205ENST00000465271 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
CNIH4-205ENST00000465271 PCDH11XQ9BZA7 1347 aa11.54□□□□□ -0.56
CNIH4-205ENST00000465271 PCDH11YQ9BZA8 1340 aa11.54□□□□□ -0.56
CNIH4-205ENST00000465271 SALL3Q9BXA9 1300 aa11.54□□□□□ -0.56
CNIH4-205ENST00000465271 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
CNIH4-205ENST00000465271 AK9Q5TCS8 1911 aa11.53□□□□□ -0.56
CNIH4-205ENST00000465271 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
CNIH4-205ENST00000465271 TAF7Q15545 349 aaPredicted RBP11.53□□□□□ -0.56
CNIH4-205ENST00000465271 CASP7P55210 303 aa11.52□□□□□ -0.56
CNIH4-205ENST00000465271 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
CNIH4-205ENST00000465271 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
CNIH4-205ENST00000465271 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
CNIH4-205ENST00000465271 HSPA1LP34931 641 aa11.51□□□□□ -0.57
CNIH4-205ENST00000465271 TOM1O60784 492 aa11.51□□□□□ -0.57
CNIH4-205ENST00000465271 BTG4Q9NY30 223 aa11.51□□□□□ -0.57
CNIH4-205ENST00000465271 G2E3Q7L622 706 aa11.51□□□□□ -0.57
CNIH4-205ENST00000465271 MARCH10Q8NA82 808 aaPredicted RBP11.51□□□□□ -0.57
CNIH4-205ENST00000465271 PTPRCP08575 1304 aa11.5□□□□□ -0.57
CNIH4-205ENST00000465271 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
CNIH4-205ENST00000465271 IGHDP01880 384 aa11.5□□□□□ -0.57
CNIH4-205ENST00000465271 ATF7IPQ6VMQ6 1270 aa11.5□□□□□ -0.57
CNIH4-205ENST00000465271 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
CNIH4-205ENST00000465271 IL2RBP14784 551 aa11.5□□□□□ -0.57
CNIH4-205ENST00000465271 MVPQ14764 893 aaKnown RBP11.5□□□□□ -0.57
CNIH4-205ENST00000465271 TAF1P21675 1872 aa11.49□□□□□ -0.57
CNIH4-205ENST00000465271 PSME4Q14997 1843 aa11.49□□□□□ -0.57
CNIH4-205ENST00000465271 PPM1GO15355 546 aaPredicted RBP11.49□□□□□ -0.57
CNIH4-205ENST00000465271 UNC5CLQ8IV45 518 aa11.49□□□□□ -0.57
CNIH4-205ENST00000465271 NOB1Q9ULX3 412 aaKnown RBP11.49□□□□□ -0.57
CNIH4-205ENST00000465271 TWISTNBQ3B726 338 aaPredicted RBP11.49□□□□□ -0.57
CNIH4-205ENST00000465271 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
CNIH4-205ENST00000465271 MYO5AQ9Y4I1 1855 aaKnown RBP11.49□□□□□ -0.57
CNIH4-205ENST00000465271 MYH7P12883 1935 aa11.49□□□□□ -0.57
CNIH4-205ENST00000465271 AAMPQ13685 434 aa11.49□□□□□ -0.57
CNIH4-205ENST00000465271 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 NBPF14Q5TI25 921 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
CNIH4-205ENST00000465271 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 MIS18AQ9NYP9 233 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 CALD1Q05682 793 aaKnown RBP11.48□□□□□ -0.57
CNIH4-205ENST00000465271 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
CNIH4-205ENST00000465271 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 PLEKHO1Q53GL0 409 aaPredicted RBP11.48□□□□□ -0.57
CNIH4-205ENST00000465271 ZNF790Q6PG37 636 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
CNIH4-205ENST00000465271 DDX60LQ5H9U9 1706 aaKnown RBP11.48□□□□□ -0.57
CNIH4-205ENST00000465271 IFNL2Q8IZJ0 200 aa11.47□□□□□ -0.57
CNIH4-205ENST00000465271 ATG3Q9NT62 314 aa11.47□□□□□ -0.57
CNIH4-205ENST00000465271 FOCADQ5VW36 1801 aa11.47□□□□□ -0.57
CNIH4-205ENST00000465271 FKBP8Q14318 412 aa11.47□□□□□ -0.57
CNIH4-205ENST00000465271 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
CNIH4-205ENST00000465271 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
CNIH4-205ENST00000465271 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
CNIH4-205ENST00000465271 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.57
CNIH4-205ENST00000465271 LAMA4Q16363 1823 aa11.46□□□□□ -0.58
CNIH4-205ENST00000465271 SOX12O15370 315 aa11.45□□□□□ -0.58
CNIH4-205ENST00000465271 PIGBQ92521 554 aa11.45□□□□□ -0.58
CNIH4-205ENST00000465271 BEND3Q5T5X7 828 aa11.45□□□□□ -0.58
CNIH4-205ENST00000465271 ZNF530Q6P9A1 599 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms