RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 IFT57Q9NWB7 429 aa22.01■■□□□ 1.11
EXOSC3-203ENST00000465229 MIS18AQ9NYP9 233 aa22.01■■□□□ 1.11
EXOSC3-203ENST00000465229 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
EXOSC3-203ENST00000465229 BRWD3Q6RI45 1802 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 BCL9O00512 1426 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 CHL1O00533 1208 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 GNAI1P63096 354 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 EP400Q96L91 3159 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 SCN11AQ9UI33 1791 aa22■■□□□ 1.11
EXOSC3-203ENST00000465229 E9PSI1 815 aa21.99■■□□□ 1.11
EXOSC3-203ENST00000465229 TRMT2AQ8IZ69 625 aaKnown RBP21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 KAT6BQ8WYB5 2073 aa21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 KCNQ2O43526 872 aa21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 FAM196AQ6ZSG2 479 aa21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 PIGBQ92521 554 aa21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 SYTL4Q96C24 671 aaPredicted RBP21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 TMOD3Q9NYL9 352 aa21.98■■□□□ 1.11
EXOSC3-203ENST00000465229 MRC1P22897 1456 aa21.97■■□□□ 1.11
EXOSC3-203ENST00000465229 BTBD11A6QL63 1104 aa21.97■■□□□ 1.11
EXOSC3-203ENST00000465229 MBIPQ9NS73 344 aa21.97■■□□□ 1.11
EXOSC3-203ENST00000465229 BABAM1Q9NWV8 329 aa21.97■■□□□ 1.11
EXOSC3-203ENST00000465229 TOGARAM1Q9Y4F4 1720 aa21.97■■□□□ 1.11
EXOSC3-203ENST00000465229 TSR2Q969E8 191 aaKnown RBP21.96■■□□□ 1.11
EXOSC3-203ENST00000465229 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
EXOSC3-203ENST00000465229 TSPYL4Q9UJ04 414 aa21.96■■□□□ 1.11
EXOSC3-203ENST00000465229 RNF123Q5XPI4 1314 aa21.96■■□□□ 1.11
EXOSC3-203ENST00000465229 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.1
EXOSC3-203ENST00000465229 DUSP27Q5VZP5 1158 aa21.95■■□□□ 1.1
EXOSC3-203ENST00000465229 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
EXOSC3-203ENST00000465229 KCNQ3O43525 872 aa21.94■■□□□ 1.1
EXOSC3-203ENST00000465229 SLC39A6Q13433 755 aa21.94■■□□□ 1.1
EXOSC3-203ENST00000465229 PTF1AQ7RTS3 328 aa21.94■■□□□ 1.1
EXOSC3-203ENST00000465229 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
EXOSC3-203ENST00000465229 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
EXOSC3-203ENST00000465229 SIPA1L3O60292 1781 aaPredicted RBP21.91■■□□□ 1.1
EXOSC3-203ENST00000465229 DOT1LQ8TEK3 1739 aa21.91■■□□□ 1.1
EXOSC3-203ENST00000465229 ATG3Q9NT62 314 aa21.91■■□□□ 1.1
EXOSC3-203ENST00000465229 BCL11BQ9C0K0 894 aaPredicted RBP21.9■■□□□ 1.1
EXOSC3-203ENST00000465229 ITGB4P16144 1822 aa21.89■■□□□ 1.1
EXOSC3-203ENST00000465229 EIF4A1P60842 406 aaKnown RBP21.89■■□□□ 1.09
EXOSC3-203ENST00000465229 TRIM37O94972 964 aa21.88■■□□□ 1.09
EXOSC3-203ENST00000465229 EXOSC9Q06265 439 aaKnown RBP21.88■■□□□ 1.09
EXOSC3-203ENST00000465229 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
EXOSC3-203ENST00000465229 KRT24Q2M2I5 525 aa21.87■■□□□ 1.09
EXOSC3-203ENST00000465229 C8orf58Q8NAV2 365 aa21.87■■□□□ 1.09
EXOSC3-203ENST00000465229 ZNF496Q96IT1 587 aaPredicted RBP21.86■■□□□ 1.09
EXOSC3-203ENST00000465229 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
EXOSC3-203ENST00000465229 PTCD1O75127 700 aaKnown RBP21.84■■□□□ 1.09
EXOSC3-203ENST00000465229 TSPYL6Q8N831 410 aa21.84■■□□□ 1.09
EXOSC3-203ENST00000465229 NHSQ6T4R5 1651 aa21.84■■□□□ 1.09
EXOSC3-203ENST00000465229 ELL2O00472 640 aaPredicted RBP21.84■■□□□ 1.09
EXOSC3-203ENST00000465229 FMNL2Q96PY5 1086 aa21.84■■□□□ 1.09
EXOSC3-203ENST00000465229 HEG1Q9ULI3 1381 aa21.83■■□□□ 1.09
EXOSC3-203ENST00000465229 KDM3BQ7LBC6 1761 aa21.83■■□□□ 1.09
EXOSC3-203ENST00000465229 SMARCC1Q92922 1105 aaPredicted RBP21.83■■□□□ 1.08
EXOSC3-203ENST00000465229 PPP4R2Q9NY27 417 aa21.82■■□□□ 1.08
EXOSC3-203ENST00000465229 GIGYF1O75420 1035 aaPredicted RBP21.81■■□□□ 1.08
EXOSC3-203ENST00000465229 KCPQ6ZWJ8 1503 aa21.81■■□□□ 1.08
EXOSC3-203ENST00000465229 PALLDQ8WX93 1383 aa21.8■■□□□ 1.08
EXOSC3-203ENST00000465229 VAMP4O75379 141 aa21.8■■□□□ 1.08
EXOSC3-203ENST00000465229 TWISTNBQ3B726 338 aaPredicted RBP21.8■■□□□ 1.08
EXOSC3-203ENST00000465229 SLC4A9Q96Q91 983 aa21.8■■□□□ 1.08
EXOSC3-203ENST00000465229 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
EXOSC3-203ENST00000465229 PAPPAQ13219 1627 aa21.8■■□□□ 1.08
EXOSC3-203ENST00000465229 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
EXOSC3-203ENST00000465229 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
EXOSC3-203ENST00000465229 IRX6P78412 446 aaPredicted RBP21.79■■□□□ 1.08
EXOSC3-203ENST00000465229 BTAF1O14981 1849 aa21.78■■□□□ 1.08
EXOSC3-203ENST00000465229 LOC102724428A0A0B4J2F2 783 aa21.78■■□□□ 1.08
EXOSC3-203ENST00000465229 SIK1P57059 783 aa21.78■■□□□ 1.08
EXOSC3-203ENST00000465229 CT47B1P0C2W7 299 aaPredicted RBP21.77■■□□□ 1.08
EXOSC3-203ENST00000465229 VSIG10Q8N0Z9 540 aa21.77■■□□□ 1.08
EXOSC3-203ENST00000465229 RCAN3Q9UKA8 241 aa21.77■■□□□ 1.08
EXOSC3-203ENST00000465229 APBA3O96018 575 aa21.77■■□□□ 1.07
EXOSC3-203ENST00000465229 HOXB7P09629 217 aa21.77■■□□□ 1.07
EXOSC3-203ENST00000465229 UBR2Q8IWV8 1755 aa21.76■■□□□ 1.07
EXOSC3-203ENST00000465229 SOS1Q07889 1333 aaPredicted RBP21.76■■□□□ 1.07
EXOSC3-203ENST00000465229 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
EXOSC3-203ENST00000465229 ATP6V1AP38606 617 aa21.74■■□□□ 1.07
EXOSC3-203ENST00000465229 DNAJC10Q8IXB1 793 aa21.74■■□□□ 1.07
EXOSC3-203ENST00000465229 PLSCR1O15162 318 aa21.73■■□□□ 1.07
EXOSC3-203ENST00000465229 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
EXOSC3-203ENST00000465229 ITPK1Q13572 414 aa21.73■■□□□ 1.07
EXOSC3-203ENST00000465229 NECTIN2Q92692 538 aa21.73■■□□□ 1.07
EXOSC3-203ENST00000465229 ZNF428Q96B54 188 aa21.73■■□□□ 1.07
EXOSC3-203ENST00000465229 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
EXOSC3-203ENST00000465229 RRP1P56182 461 aaKnown RBP21.72■■□□□ 1.07
EXOSC3-203ENST00000465229 KCNQ4P56696 695 aa21.72■■□□□ 1.07
EXOSC3-203ENST00000465229 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
EXOSC3-203ENST00000465229 RARSP54136 660 aaKnown RBP21.71■■□□□ 1.07
EXOSC3-203ENST00000465229 ILDR2Q71H61 639 aa21.71■■□□□ 1.07
EXOSC3-203ENST00000465229 PROM2Q8N271 834 aa21.71■■□□□ 1.07
EXOSC3-203ENST00000465229 CCNL1Q9UK58 526 aaPredicted RBP21.71■■□□□ 1.07
EXOSC3-203ENST00000465229 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.06
EXOSC3-203ENST00000465229 STARD3NLO95772 234 aa21.69■■□□□ 1.06
EXOSC3-203ENST00000465229 CYP19A1P11511 503 aaPredicted RBP21.69■■□□□ 1.06
EXOSC3-203ENST00000465229 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
EXOSC3-203ENST00000465229 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
EXOSC3-203ENST00000465229 LRRC4BQ9NT99 713 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms