RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
COL11A1-207ENST00000465209 PHF14O94880 888 aa15.18■□□□□ 0.02
COL11A1-207ENST00000465209 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
COL11A1-207ENST00000465209 N4BP2Q86UW6 1770 aaPredicted RBP15.17■□□□□ 0.02
COL11A1-207ENST00000465209 IFNL2Q8IZJ0 200 aa15.17■□□□□ 0.02
COL11A1-207ENST00000465209 ATG3Q9NT62 314 aa15.17■□□□□ 0.02
COL11A1-207ENST00000465209 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
COL11A1-207ENST00000465209 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
COL11A1-207ENST00000465209 SLC4A9Q96Q91 983 aa15.16■□□□□ 0.02
COL11A1-207ENST00000465209 PXDNLA1KZ92 1463 aa15.15■□□□□ 0.02
COL11A1-207ENST00000465209 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
COL11A1-207ENST00000465209 TJP1Q07157 1748 aa15.14■□□□□ 0.01
COL11A1-207ENST00000465209 GNPATO15228 680 aa15.14■□□□□ 0.01
COL11A1-207ENST00000465209 ATP6V1AP38606 617 aa15.14■□□□□ 0.01
COL11A1-207ENST00000465209 C10orf71Q711Q0 1435 aa15.14■□□□□ 0.01
COL11A1-207ENST00000465209 ADAMTS7Q9UKP4 1686 aa15.13■□□□□ 0.01
COL11A1-207ENST00000465209 SCN11AQ9UI33 1791 aa15.13■□□□□ 0.01
COL11A1-207ENST00000465209 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
COL11A1-207ENST00000465209 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
COL11A1-207ENST00000465209 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
COL11A1-207ENST00000465209 CNTNAP4Q9C0A0 1308 aa15.11■□□□□ 0.01
COL11A1-207ENST00000465209 MMP10P09238 476 aa15.1■□□□□ 0.01
COL11A1-207ENST00000465209 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
COL11A1-207ENST00000465209 ARFGEF1Q9Y6D6 1849 aa15.1■□□□□ 0.01
COL11A1-207ENST00000465209 DCAF5Q96JK2 942 aa15.09■□□□□ 0.01
COL11A1-207ENST00000465209 GPBP1L1Q9HC44 474 aaPredicted RBP15.09■□□□□ 0.01
COL11A1-207ENST00000465209 RC3H1Q5TC82 1133 aaKnown RBP15.08■□□□□ 0
COL11A1-207ENST00000465209 AEBP1Q8IUX7 1158 aa15.08■□□□□ 0
COL11A1-207ENST00000465209 PANK3Q9H999 370 aa15.08■□□□□ 0
COL11A1-207ENST00000465209 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
COL11A1-207ENST00000465209 GYS1P13807 737 aa15.07■□□□□ 0
COL11A1-207ENST00000465209 ADRA2BP18089 450 aa15.07■□□□□ 0
COL11A1-207ENST00000465209 ARHGEF1Q92888 912 aaKnown RBP15.07■□□□□ 0
COL11A1-207ENST00000465209 RTCBQ9Y3I0 505 aaKnown RBP15.07■□□□□ 0
COL11A1-207ENST00000465209 MRC1P22897 1456 aa15.07■□□□□ 0
COL11A1-207ENST00000465209 KIF3CO14782 793 aa15.06■□□□□ 0
COL11A1-207ENST00000465209 HSP90AB1P08238 724 aaKnown RBP15.06■□□□□ 0
COL11A1-207ENST00000465209 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
COL11A1-207ENST00000465209 RPS6KA4O75676 772 aa15.05■□□□□ -0
COL11A1-207ENST00000465209 TGFB2P61812 414 aa15.05■□□□□ -0
COL11A1-207ENST00000465209 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
COL11A1-207ENST00000465209 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
COL11A1-207ENST00000465209 TRAPPC3LQ5T215 181 aa15.05■□□□□ -0
COL11A1-207ENST00000465209 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ -0
COL11A1-207ENST00000465209 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ -0
COL11A1-207ENST00000465209 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
COL11A1-207ENST00000465209 HSPA6P17066 643 aa15.04■□□□□ -0
COL11A1-207ENST00000465209 AMOTQ4VCS5 1084 aa15.04■□□□□ -0
COL11A1-207ENST00000465209 NLGN1Q8N2Q7 840 aa15.04■□□□□ -0
COL11A1-207ENST00000465209 KCNA3P22001 575 aa15.03■□□□□ -0
COL11A1-207ENST00000465209 AFDNP55196 1824 aaKnown RBP15.02■□□□□ -0
COL11A1-207ENST00000465209 A0A0G2JLW4 131 aa15.02■□□□□ -0
COL11A1-207ENST00000465209 IL13P35225 146 aa15.02■□□□□ -0
COL11A1-207ENST00000465209 CABP4P57796 275 aa15.02■□□□□ -0
COL11A1-207ENST00000465209 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
COL11A1-207ENST00000465209 NRXN2Q9P2S2 1712 aa15.02□□□□□ -0.01
COL11A1-207ENST00000465209 KCPQ6ZWJ8 1503 aa15.02□□□□□ -0.01
COL11A1-207ENST00000465209 SBF1O95248 1867 aa15.01□□□□□ -0.01
COL11A1-207ENST00000465209 USP42Q9H9J4 1324 aaKnown RBP15.01□□□□□ -0.01
COL11A1-207ENST00000465209 DPEP1P16444 411 aa15.01□□□□□ -0.01
COL11A1-207ENST00000465209 CRKLP46109 303 aaKnown RBP15.01□□□□□ -0.01
COL11A1-207ENST00000465209 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
COL11A1-207ENST00000465209 RFC4P35249 363 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 MTHFSP49914 203 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 DDR1Q08345 913 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
COL11A1-207ENST00000465209 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 MORC1Q86VD1 984 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 NFATC2IPQ8NCF5 419 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 CCDC87Q9NVE4 849 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 BCS1LQ9Y276 419 aa15□□□□□ -0.01
COL11A1-207ENST00000465209 PTCD1O75127 700 aaKnown RBP14.99□□□□□ -0.01
COL11A1-207ENST00000465209 PCGF6Q9BYE7 350 aa14.99□□□□□ -0.01
COL11A1-207ENST00000465209 SRP68Q9UHB9 627 aaKnown RBP14.99□□□□□ -0.01
COL11A1-207ENST00000465209 PCNTO95613 3336 aa14.98□□□□□ -0.01
COL11A1-207ENST00000465209 FKBP8Q14318 412 aa14.98□□□□□ -0.01
COL11A1-207ENST00000465209 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
COL11A1-207ENST00000465209 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
COL11A1-207ENST00000465209 INTS5Q6P9B9 1019 aaKnown RBP14.98□□□□□ -0.01
COL11A1-207ENST00000465209 PARP3Q9Y6F1 533 aa14.97□□□□□ -0.01
COL11A1-207ENST00000465209 SIPA1L3O60292 1781 aaPredicted RBP14.97□□□□□ -0.01
COL11A1-207ENST00000465209 WDR90Q96KV7 1748 aa14.97□□□□□ -0.01
COL11A1-207ENST00000465209 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
COL11A1-207ENST00000465209 POLRMTO00411 1230 aaKnown RBP14.96□□□□□ -0.01
COL11A1-207ENST00000465209 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.01
COL11A1-207ENST00000465209 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
COL11A1-207ENST00000465209 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-207ENST00000465209 FCHSD2O94868 740 aa14.95□□□□□ -0.02
COL11A1-207ENST00000465209 TM4SF1P30408 202 aa14.95□□□□□ -0.02
COL11A1-207ENST00000465209 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
COL11A1-207ENST00000465209 TNRC6CQ9HCJ0 1690 aaKnown RBP14.95□□□□□ -0.02
COL11A1-207ENST00000465209 KIF7Q2M1P5 1343 aa14.94□□□□□ -0.02
COL11A1-207ENST00000465209 ARHGAP27Q6ZUM4 889 aa14.94□□□□□ -0.02
COL11A1-207ENST00000465209 DNAJC10Q8IXB1 793 aa14.94□□□□□ -0.02
COL11A1-207ENST00000465209 NMRK2Q9NPI5 230 aa14.94□□□□□ -0.02
COL11A1-207ENST00000465209 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
COL11A1-207ENST00000465209 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
COL11A1-207ENST00000465209 PER1O15534 1290 aaPredicted RBP14.93□□□□□ -0.02
COL11A1-207ENST00000465209 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
COL11A1-207ENST00000465209 TOMM70O94826 608 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms