RNA–Protein interactions for RNA: ENST00000465180.5

HDGF-204, Transcript of heparin binding growth factor, humanhuman

TSL 1 (best)

Gene HDGF, Length 2,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-204ENST00000465180 DDX54Q8TDD1 881 aaKnown RBP20.02■□□□□ 0.8
HDGF-204ENST00000465180 TSPYL4Q9UJ04 414 aa20.02■□□□□ 0.8
HDGF-204ENST00000465180 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 TEFQ10587 303 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 NRAPQ86VF7 1730 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 USP21Q9UK80 565 aa20.01■□□□□ 0.79
HDGF-204ENST00000465180 PARP4Q9UKK3 1724 aaKnown RBP20■□□□□ 0.79
HDGF-204ENST00000465180 NWD2Q9ULI1 1742 aa20■□□□□ 0.79
HDGF-204ENST00000465180 ELL2O00472 640 aaPredicted RBP20■□□□□ 0.79
HDGF-204ENST00000465180 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
HDGF-204ENST00000465180 BCAR3O75815 825 aa19.99■□□□□ 0.79
HDGF-204ENST00000465180 DCAF5Q96JK2 942 aa19.99■□□□□ 0.79
HDGF-204ENST00000465180 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
HDGF-204ENST00000465180 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
HDGF-204ENST00000465180 CT47B1P0C2W7 299 aaPredicted RBP19.98■□□□□ 0.79
HDGF-204ENST00000465180 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
HDGF-204ENST00000465180 VPS72Q15906 364 aa19.98■□□□□ 0.79
HDGF-204ENST00000465180 TSPYL6Q8N831 410 aa19.98■□□□□ 0.79
HDGF-204ENST00000465180 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
HDGF-204ENST00000465180 DISP2A7MBM2 1401 aa19.98■□□□□ 0.79
HDGF-204ENST00000465180 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
HDGF-204ENST00000465180 EXOC5O00471 708 aa19.97■□□□□ 0.79
HDGF-204ENST00000465180 LRRC37A3O60309 1634 aa19.97■□□□□ 0.79
HDGF-204ENST00000465180 PLIN1O60240 522 aa19.96■□□□□ 0.79
HDGF-204ENST00000465180 KRT24Q2M2I5 525 aa19.96■□□□□ 0.79
HDGF-204ENST00000465180 CDCA7Q9BWT1 371 aaPredicted RBP19.96■□□□□ 0.79
HDGF-204ENST00000465180 BABAM1Q9NWV8 329 aa19.96■□□□□ 0.79
HDGF-204ENST00000465180 KDM6AO15550 1401 aaPredicted RBP19.96■□□□□ 0.79
HDGF-204ENST00000465180 AFF2P51816 1311 aa19.96■□□□□ 0.79
HDGF-204ENST00000465180 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
HDGF-204ENST00000465180 TWISTNBQ3B726 338 aaPredicted RBP19.96■□□□□ 0.79
HDGF-204ENST00000465180 BCL2L13Q9BXK5 485 aa19.96■□□□□ 0.79
HDGF-204ENST00000465180 VAMP4O75379 141 aa19.95■□□□□ 0.78
HDGF-204ENST00000465180 BARGINQ6ZT62 677 aa19.95■□□□□ 0.78
HDGF-204ENST00000465180 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
HDGF-204ENST00000465180 NPM2Q86SE8 214 aaKnown RBP19.94■□□□□ 0.78
HDGF-204ENST00000465180 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
HDGF-204ENST00000465180 HSP90AA2PQ14568 343 aaPredicted RBP19.93■□□□□ 0.78
HDGF-204ENST00000465180 NKX1-1Q15270 411 aaPredicted RBP19.93■□□□□ 0.78
HDGF-204ENST00000465180 FAM98CQ17RN3 349 aaKnown RBP19.93■□□□□ 0.78
HDGF-204ENST00000465180 CABP4P57796 275 aa19.92■□□□□ 0.78
HDGF-204ENST00000465180 DDB1Q16531 1140 aa19.92■□□□□ 0.78
HDGF-204ENST00000465180 KCNQ3O43525 872 aa19.91■□□□□ 0.78
HDGF-204ENST00000465180 FBXO41Q8TF61 875 aa19.91■□□□□ 0.78
HDGF-204ENST00000465180 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
HDGF-204ENST00000465180 SMC4Q9NTJ3 1288 aa19.91■□□□□ 0.78
HDGF-204ENST00000465180 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.91■□□□□ 0.78
HDGF-204ENST00000465180 ADAMTS7Q9UKP4 1686 aa19.9■□□□□ 0.78
HDGF-204ENST00000465180 ZNF428Q96B54 188 aa19.9■□□□□ 0.78
HDGF-204ENST00000465180 ERVV-2B6SEH9 535 aa19.89■□□□□ 0.77
HDGF-204ENST00000465180 SCN11AQ9UI33 1791 aa19.89■□□□□ 0.77
HDGF-204ENST00000465180 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.77
HDGF-204ENST00000465180 VIRMAQ69YN4 1812 aaKnown RBP19.88■□□□□ 0.77
HDGF-204ENST00000465180 A0A0G2JS52 829 aa19.88■□□□□ 0.77
HDGF-204ENST00000465180 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
HDGF-204ENST00000465180 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
HDGF-204ENST00000465180 CANXP27824 592 aaKnown RBP19.88■□□□□ 0.77
HDGF-204ENST00000465180 SLC39A6Q13433 755 aa19.88■□□□□ 0.77
HDGF-204ENST00000465180 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
HDGF-204ENST00000465180 TNS2Q63HR2 1409 aa19.87■□□□□ 0.77
HDGF-204ENST00000465180 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
HDGF-204ENST00000465180 HSP90AA1P07900 732 aaKnown RBP19.87■□□□□ 0.77
HDGF-204ENST00000465180 WNK3Q9BYP7 1800 aa19.86■□□□□ 0.77
HDGF-204ENST00000465180 C20orf194Q5TEA3 1177 aa19.86■□□□□ 0.77
HDGF-204ENST00000465180 ZNF790Q6PG37 636 aa19.86■□□□□ 0.77
HDGF-204ENST00000465180 QTRT2Q9H974 415 aaKnown RBP19.86■□□□□ 0.77
HDGF-204ENST00000465180 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.86■□□□□ 0.77
HDGF-204ENST00000465180 L1TD1Q5T7N2 865 aaKnown RBP19.85■□□□□ 0.77
HDGF-204ENST00000465180 MARCH10Q8NA82 808 aaPredicted RBP19.85■□□□□ 0.77
HDGF-204ENST00000465180 MRC1P22897 1456 aa19.84■□□□□ 0.77
HDGF-204ENST00000465180 SIPA1L3O60292 1781 aaPredicted RBP19.84■□□□□ 0.77
HDGF-204ENST00000465180 TTC5Q8N0Z6 440 aa19.83■□□□□ 0.77
HDGF-204ENST00000465180 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.77
HDGF-204ENST00000465180 NOB1Q9ULX3 412 aaKnown RBP19.83■□□□□ 0.77
HDGF-204ENST00000465180 ATRNO75882 1429 aa19.83■□□□□ 0.77
HDGF-204ENST00000465180 NECTIN2Q92692 538 aa19.83■□□□□ 0.76
HDGF-204ENST00000465180 TMOD3Q9NYL9 352 aa19.83■□□□□ 0.76
HDGF-204ENST00000465180 KDM3BQ7LBC6 1761 aa19.83■□□□□ 0.76
HDGF-204ENST00000465180 ZKSCAN2Q63HK3 967 aa19.81■□□□□ 0.76
HDGF-204ENST00000465180 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
HDGF-204ENST00000465180 RRAGDQ9NQL2 400 aaPredicted RBP19.81■□□□□ 0.76
HDGF-204ENST00000465180 SOS1Q07889 1333 aaPredicted RBP19.81■□□□□ 0.76
HDGF-204ENST00000465180 KIF16BQ96L93 1317 aa19.81■□□□□ 0.76
HDGF-204ENST00000465180 EIF2S2P20042 333 aaKnown RBP19.8■□□□□ 0.76
HDGF-204ENST00000465180 BRPF1P55201 1214 aaPredicted RBP19.8■□□□□ 0.76
HDGF-204ENST00000465180 TNNQ9UQP3 1299 aa19.8■□□□□ 0.76
HDGF-204ENST00000465180 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
HDGF-204ENST00000465180 CLCN1P35523 988 aa19.8■□□□□ 0.76
HDGF-204ENST00000465180 CCDC30Q5VVM6 783 aa19.8■□□□□ 0.76
HDGF-204ENST00000465180 PIGBQ92521 554 aa19.8■□□□□ 0.76
HDGF-204ENST00000465180 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
HDGF-204ENST00000465180 ZNF496Q96IT1 587 aaPredicted RBP19.8■□□□□ 0.76
HDGF-204ENST00000465180 GLI3P10071 1580 aa19.8■□□□□ 0.76
HDGF-204ENST00000465180 IPO8O15397 1037 aaKnown RBP19.79■□□□□ 0.76
HDGF-204ENST00000465180 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
HDGF-204ENST00000465180 HDGFL1Q5TGJ6 251 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms