RNA–Protein interactions for RNA: ENST00000464886.1

CGN-204, Transcript of cingulin, humanhuman

TSL 3

Gene CGN, Length 373 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-204ENST00000464886 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
CGN-204ENST00000464886 THUMPD2Q9BTF0 503 aaKnown RBP16.69■□□□□ 0.26
CGN-204ENST00000464886 CHL1O00533 1208 aa16.68■□□□□ 0.26
CGN-204ENST00000464886 ZNF853P0CG23 659 aa16.68■□□□□ 0.26
CGN-204ENST00000464886 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
CGN-204ENST00000464886 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
CGN-204ENST00000464886 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
CGN-204ENST00000464886 ITGB4P16144 1822 aa16.68■□□□□ 0.26
CGN-204ENST00000464886 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
CGN-204ENST00000464886 FAM182BQ5T319 152 aa16.67■□□□□ 0.26
CGN-204ENST00000464886 PIGBQ92521 554 aa16.67■□□□□ 0.26
CGN-204ENST00000464886 ACSBG1Q96GR2 724 aa16.67■□□□□ 0.26
CGN-204ENST00000464886 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
CGN-204ENST00000464886 TTC5Q8N0Z6 440 aa16.66■□□□□ 0.26
CGN-204ENST00000464886 CHMP4AQ9BY43 222 aa16.66■□□□□ 0.26
CGN-204ENST00000464886 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
CGN-204ENST00000464886 MRC1P22897 1456 aa16.66■□□□□ 0.26
CGN-204ENST00000464886 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
CGN-204ENST00000464886 ZNF790Q6PG37 636 aa16.65■□□□□ 0.26
CGN-204ENST00000464886 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
CGN-204ENST00000464886 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
CGN-204ENST00000464886 DOT1LQ8TEK3 1739 aa16.64■□□□□ 0.25
CGN-204ENST00000464886 KCNQ2O43526 872 aa16.63■□□□□ 0.25
CGN-204ENST00000464886 TRMT2AQ8IZ69 625 aaKnown RBP16.63■□□□□ 0.25
CGN-204ENST00000464886 TOGARAM1Q9Y4F4 1720 aa16.62■□□□□ 0.25
CGN-204ENST00000464886 TRIM37O94972 964 aa16.62■□□□□ 0.25
CGN-204ENST00000464886 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
CGN-204ENST00000464886 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
CGN-204ENST00000464886 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
CGN-204ENST00000464886 NHSQ6T4R5 1651 aa16.62■□□□□ 0.25
CGN-204ENST00000464886 SF3B2Q13435 895 aaKnown RBP16.61■□□□□ 0.25
CGN-204ENST00000464886 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
CGN-204ENST00000464886 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
CGN-204ENST00000464886 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
CGN-204ENST00000464886 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
CGN-204ENST00000464886 CDCA7LQ96GN5 454 aa16.6■□□□□ 0.25
CGN-204ENST00000464886 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
CGN-204ENST00000464886 PLSCR1O15162 318 aa16.59■□□□□ 0.25
CGN-204ENST00000464886 CT47B1P0C2W7 299 aaPredicted RBP16.59■□□□□ 0.25
CGN-204ENST00000464886 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
CGN-204ENST00000464886 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
CGN-204ENST00000464886 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
CGN-204ENST00000464886 HOXB7P09629 217 aa16.58■□□□□ 0.24
CGN-204ENST00000464886 DUSP27Q5VZP5 1158 aa16.58■□□□□ 0.24
CGN-204ENST00000464886 FANCIQ9NVI1 1328 aa16.58■□□□□ 0.24
CGN-204ENST00000464886 BTAF1O14981 1849 aa16.57■□□□□ 0.24
CGN-204ENST00000464886 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
CGN-204ENST00000464886 APBA3O96018 575 aa16.57■□□□□ 0.24
CGN-204ENST00000464886 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
CGN-204ENST00000464886 TSR2Q969E8 191 aaKnown RBP16.57■□□□□ 0.24
CGN-204ENST00000464886 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
CGN-204ENST00000464886 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
CGN-204ENST00000464886 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
CGN-204ENST00000464886 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
CGN-204ENST00000464886 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 KCNQ3O43525 872 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 GIGYF1O75420 1035 aaPredicted RBP16.55■□□□□ 0.24
CGN-204ENST00000464886 SIK1P57059 783 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
CGN-204ENST00000464886 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
CGN-204ENST00000464886 STARD3NLO95772 234 aa16.54■□□□□ 0.24
CGN-204ENST00000464886 BAG6P46379 1132 aa16.54■□□□□ 0.24
CGN-204ENST00000464886 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
CGN-204ENST00000464886 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
CGN-204ENST00000464886 ATP6V1AP38606 617 aa16.53■□□□□ 0.24
CGN-204ENST00000464886 UBR2Q8IWV8 1755 aa16.53■□□□□ 0.24
CGN-204ENST00000464886 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
CGN-204ENST00000464886 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
CGN-204ENST00000464886 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
CGN-204ENST00000464886 VAMP4O75379 141 aa16.51■□□□□ 0.23
CGN-204ENST00000464886 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
CGN-204ENST00000464886 CCNL1Q9UK58 526 aaPredicted RBP16.51■□□□□ 0.23
CGN-204ENST00000464886 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
CGN-204ENST00000464886 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CGN-204ENST00000464886 LY75O60449 1722 aa16.49■□□□□ 0.23
CGN-204ENST00000464886 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
CGN-204ENST00000464886 ERBB4Q15303 1308 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
CGN-204ENST00000464886 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
CGN-204ENST00000464886 HDGFL1Q5TGJ6 251 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
CGN-204ENST00000464886 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
CGN-204ENST00000464886 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
CGN-204ENST00000464886 CYP19A1P11511 503 aaPredicted RBP16.47■□□□□ 0.23
CGN-204ENST00000464886 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
CGN-204ENST00000464886 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
CGN-204ENST00000464886 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
CGN-204ENST00000464886 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
CGN-204ENST00000464886 CAMKK2Q96RR4 588 aa16.47■□□□□ 0.23
CGN-204ENST00000464886 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
CGN-204ENST00000464886 ILDR2Q71H61 639 aa16.46■□□□□ 0.23
CGN-204ENST00000464886 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms