RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 SIPA1L3O60292 1781 aaPredicted RBP15.94■□□□□ 0.14
RPUSD3-211ENST00000464783 KCNQ4P56696 695 aa15.93■□□□□ 0.14
RPUSD3-211ENST00000464783 TEFQ10587 303 aa15.93■□□□□ 0.14
RPUSD3-211ENST00000464783 PLEKHF1Q96S99 279 aa15.93■□□□□ 0.14
RPUSD3-211ENST00000464783 SLC52A2Q9HAB3 445 aa15.93■□□□□ 0.14
RPUSD3-211ENST00000464783 LRRC4BQ9NT99 713 aa15.93■□□□□ 0.14
RPUSD3-211ENST00000464783 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
RPUSD3-211ENST00000464783 ATG3Q9NT62 314 aa15.92■□□□□ 0.14
RPUSD3-211ENST00000464783 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
RPUSD3-211ENST00000464783 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
RPUSD3-211ENST00000464783 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
RPUSD3-211ENST00000464783 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
RPUSD3-211ENST00000464783 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
RPUSD3-211ENST00000464783 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
RPUSD3-211ENST00000464783 SIK1P57059 783 aa15.9■□□□□ 0.14
RPUSD3-211ENST00000464783 NFE2L2Q16236 605 aa15.9■□□□□ 0.14
RPUSD3-211ENST00000464783 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
RPUSD3-211ENST00000464783 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
RPUSD3-211ENST00000464783 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 C4BP0C0L5 1744 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 QSER1Q2KHR3 1735 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 SLC15A2Q16348 729 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 CCDC184Q52MB2 194 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 MCM10Q7L590 875 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
RPUSD3-211ENST00000464783 UBR2Q8IWV8 1755 aa15.88■□□□□ 0.13
RPUSD3-211ENST00000464783 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
RPUSD3-211ENST00000464783 PTCD1O75127 700 aaKnown RBP15.88■□□□□ 0.13
RPUSD3-211ENST00000464783 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
RPUSD3-211ENST00000464783 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
RPUSD3-211ENST00000464783 ZNF827Q17R98 1081 aa15.87■□□□□ 0.13
RPUSD3-211ENST00000464783 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
RPUSD3-211ENST00000464783 TFCP2L1Q9NZI6 479 aa15.87■□□□□ 0.13
RPUSD3-211ENST00000464783 COL5A3P25940 1745 aaPredicted RBP15.87■□□□□ 0.13
RPUSD3-211ENST00000464783 CASZ1Q86V15 1759 aa15.87■□□□□ 0.13
RPUSD3-211ENST00000464783 TJP1Q07157 1748 aa15.86■□□□□ 0.13
RPUSD3-211ENST00000464783 RIPK4P57078 832 aa15.86■□□□□ 0.13
RPUSD3-211ENST00000464783 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
RPUSD3-211ENST00000464783 BTBD11A6QL63 1104 aa15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 AK7Q96M32 723 aa15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
RPUSD3-211ENST00000464783 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
RPUSD3-211ENST00000464783 CICQ96RK0 1608 aaPredicted RBP15.84■□□□□ 0.13
RPUSD3-211ENST00000464783 ITPK1Q13572 414 aa15.84■□□□□ 0.13
RPUSD3-211ENST00000464783 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
RPUSD3-211ENST00000464783 LINC00116Q8NCU8 138 aa15.83■□□□□ 0.12
RPUSD3-211ENST00000464783 MSH5O43196 834 aa15.82■□□□□ 0.12
RPUSD3-211ENST00000464783 ZNF790Q6PG37 636 aa15.82■□□□□ 0.12
RPUSD3-211ENST00000464783 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-211ENST00000464783 SLC4A9Q96Q91 983 aa15.82■□□□□ 0.12
RPUSD3-211ENST00000464783 THUMPD2Q9BTF0 503 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-211ENST00000464783 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
RPUSD3-211ENST00000464783 LRP5O75197 1615 aa15.81■□□□□ 0.12
RPUSD3-211ENST00000464783 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
RPUSD3-211ENST00000464783 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
RPUSD3-211ENST00000464783 PNPLA7Q6ZV29 1317 aa15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 APAF1O14727 1248 aa15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 GNPATO15228 680 aa15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 PDGFDQ9GZP0 370 aaPredicted RBP15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
RPUSD3-211ENST00000464783 PHF14O94880 888 aa15.79■□□□□ 0.12
RPUSD3-211ENST00000464783 ZBTB7AO95365 584 aa15.79■□□□□ 0.12
RPUSD3-211ENST00000464783 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
RPUSD3-211ENST00000464783 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
RPUSD3-211ENST00000464783 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
RPUSD3-211ENST00000464783 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
RPUSD3-211ENST00000464783 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
RPUSD3-211ENST00000464783 MIS18AQ9NYP9 233 aa15.78■□□□□ 0.12
RPUSD3-211ENST00000464783 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
RPUSD3-211ENST00000464783 KCNQ3O43525 872 aa15.77■□□□□ 0.12
RPUSD3-211ENST00000464783 SPON1Q9HCB6 807 aa15.77■□□□□ 0.12
RPUSD3-211ENST00000464783 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-211ENST00000464783 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.11
RPUSD3-211ENST00000464783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-211ENST00000464783 SSFA2P28290 1259 aa15.76■□□□□ 0.11
RPUSD3-211ENST00000464783 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-211ENST00000464783 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-211ENST00000464783 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
RPUSD3-211ENST00000464783 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
RPUSD3-211ENST00000464783 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 COL23A1Q86Y22 540 aaPredicted RBP15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 TEX13AQ9BXU3 409 aaPredicted RBP15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 MTFR1LQ9H019 292 aa15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 TSPYL4Q9UJ04 414 aa15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-211ENST00000464783 STARD3NLO95772 234 aa15.74■□□□□ 0.11
RPUSD3-211ENST00000464783 CYP19A1P11511 503 aaPredicted RBP15.74■□□□□ 0.11
RPUSD3-211ENST00000464783 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
RPUSD3-211ENST00000464783 SLC16A10Q8TF71 515 aa15.74■□□□□ 0.11
RPUSD3-211ENST00000464783 CCDC87Q9NVE4 849 aa15.74■□□□□ 0.11
RPUSD3-211ENST00000464783 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
RPUSD3-211ENST00000464783 RPS6KA4O75676 772 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms