RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 CLUAP1Q96AJ1 413 aa12.55□□□□□ -0.4
LINC01998-201ENST00000464673 PKD1L3Q7Z443 1732 aa12.55□□□□□ -0.4
LINC01998-201ENST00000464673 PHKG2P15735 406 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
LINC01998-201ENST00000464673 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 NBR1Q14596 966 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
LINC01998-201ENST00000464673 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
LINC01998-201ENST00000464673 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
LINC01998-201ENST00000464673 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
LINC01998-201ENST00000464673 MPRIPQ6WCQ1 1025 aa12.53□□□□□ -0.4
LINC01998-201ENST00000464673 MCM10Q7L590 875 aa12.53□□□□□ -0.4
LINC01998-201ENST00000464673 MYH16Q9H6N6 1097 aa12.53□□□□□ -0.4
LINC01998-201ENST00000464673 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.4
LINC01998-201ENST00000464673 RXRBP28702 533 aa12.52□□□□□ -0.4
LINC01998-201ENST00000464673 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.4
LINC01998-201ENST00000464673 IL17REQ8NFR9 667 aa12.52□□□□□ -0.4
LINC01998-201ENST00000464673 THUMPD2Q9BTF0 503 aaKnown RBP12.52□□□□□ -0.4
LINC01998-201ENST00000464673 TNS2Q63HR2 1409 aa12.52□□□□□ -0.4
LINC01998-201ENST00000464673 SHANK3Q9BYB0 1731 aa12.52□□□□□ -0.41
LINC01998-201ENST00000464673 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
LINC01998-201ENST00000464673 LRRC37A3O60309 1634 aa12.52□□□□□ -0.41
LINC01998-201ENST00000464673 IGHDP01880 384 aa12.51□□□□□ -0.41
LINC01998-201ENST00000464673 IL16Q14005 1332 aa12.51□□□□□ -0.41
LINC01998-201ENST00000464673 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
LINC01998-201ENST00000464673 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
LINC01998-201ENST00000464673 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
LINC01998-201ENST00000464673 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
LINC01998-201ENST00000464673 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
LINC01998-201ENST00000464673 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
LINC01998-201ENST00000464673 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
LINC01998-201ENST00000464673 PANK1Q8TE04 598 aa12.49□□□□□ -0.41
LINC01998-201ENST00000464673 COG6Q9Y2V7 657 aa12.49□□□□□ -0.41
LINC01998-201ENST00000464673 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
LINC01998-201ENST00000464673 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
LINC01998-201ENST00000464673 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
LINC01998-201ENST00000464673 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
LINC01998-201ENST00000464673 TEFQ10587 303 aa12.47□□□□□ -0.41
LINC01998-201ENST00000464673 RGS3P49796 1198 aa12.47□□□□□ -0.41
LINC01998-201ENST00000464673 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
LINC01998-201ENST00000464673 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
LINC01998-201ENST00000464673 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
LINC01998-201ENST00000464673 ADAMTS7Q9UKP4 1686 aa12.46□□□□□ -0.41
LINC01998-201ENST00000464673 RLBP1P12271 317 aa12.46□□□□□ -0.41
LINC01998-201ENST00000464673 LAS1LQ9Y4W2 734 aaKnown RBP12.46□□□□□ -0.41
LINC01998-201ENST00000464673 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
LINC01998-201ENST00000464673 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 SLC52A2Q9HAB3 445 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 ZNF853P0CG23 659 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 CABP4P57796 275 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
LINC01998-201ENST00000464673 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
LINC01998-201ENST00000464673 RGS12O14924 1447 aa12.44□□□□□ -0.42
LINC01998-201ENST00000464673 CHL1O00533 1208 aa12.44□□□□□ -0.42
LINC01998-201ENST00000464673 GNAI1P63096 354 aa12.44□□□□□ -0.42
LINC01998-201ENST00000464673 FRAT1Q92837 279 aaPredicted RBP12.44□□□□□ -0.42
LINC01998-201ENST00000464673 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
LINC01998-201ENST00000464673 PCDHB15Q9Y5E8 787 aa12.44□□□□□ -0.42
LINC01998-201ENST00000464673 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
LINC01998-201ENST00000464673 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
LINC01998-201ENST00000464673 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
LINC01998-201ENST00000464673 RWDD1Q9H446 243 aaPredicted RBP12.43□□□□□ -0.42
LINC01998-201ENST00000464673 TOGARAM1Q9Y4F4 1720 aa12.43□□□□□ -0.42
LINC01998-201ENST00000464673 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
LINC01998-201ENST00000464673 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
LINC01998-201ENST00000464673 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
LINC01998-201ENST00000464673 TSPYL4Q9UJ04 414 aa12.42□□□□□ -0.42
LINC01998-201ENST00000464673 MRC1P22897 1456 aa12.42□□□□□ -0.42
LINC01998-201ENST00000464673 KCNQ2O43526 872 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
LINC01998-201ENST00000464673 PIGBQ92521 554 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
LINC01998-201ENST00000464673 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
LINC01998-201ENST00000464673 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 ZNF428Q96B54 188 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
LINC01998-201ENST00000464673 ITGB4P16144 1822 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 BCL9O00512 1426 aa12.41□□□□□ -0.42
LINC01998-201ENST00000464673 SLC39A6Q13433 755 aa12.4□□□□□ -0.42
LINC01998-201ENST00000464673 HDAC1Q13547 482 aaPredicted RBP12.4□□□□□ -0.42
LINC01998-201ENST00000464673 ZNF790Q6PG37 636 aa12.4□□□□□ -0.42
LINC01998-201ENST00000464673 KCNQ3O43525 872 aa12.39□□□□□ -0.43
LINC01998-201ENST00000464673 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
LINC01998-201ENST00000464673 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
LINC01998-201ENST00000464673 PTF1AQ7RTS3 328 aa12.39□□□□□ -0.43
LINC01998-201ENST00000464673 PDZRN3Q9UPQ7 1066 aa12.39□□□□□ -0.43
LINC01998-201ENST00000464673 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
LINC01998-201ENST00000464673 NFKBIBQ15653 356 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms