RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 CHL1O00533 1208 aa16.6■□□□□ 0.25
SUPT20H-204ENST00000464572 CABP4P57796 275 aa16.6■□□□□ 0.25
SUPT20H-204ENST00000464572 FANCIQ9NVI1 1328 aa16.6■□□□□ 0.25
SUPT20H-204ENST00000464572 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
SUPT20H-204ENST00000464572 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
SUPT20H-204ENST00000464572 KAT6BQ8WYB5 2073 aa16.59■□□□□ 0.25
SUPT20H-204ENST00000464572 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
SUPT20H-204ENST00000464572 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
SUPT20H-204ENST00000464572 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
SUPT20H-204ENST00000464572 TOGARAM1Q9Y4F4 1720 aa16.57■□□□□ 0.24
SUPT20H-204ENST00000464572 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 MRC1P22897 1456 aa16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 KRT27Q7Z3Y8 459 aa16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 EXOSC9Q06265 439 aaKnown RBP16.56■□□□□ 0.24
SUPT20H-204ENST00000464572 SIPA1L3O60292 1781 aaPredicted RBP16.55■□□□□ 0.24
SUPT20H-204ENST00000464572 KCNQ3O43525 872 aa16.55■□□□□ 0.24
SUPT20H-204ENST00000464572 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
SUPT20H-204ENST00000464572 BRWD3Q6RI45 1802 aa16.55■□□□□ 0.24
SUPT20H-204ENST00000464572 PIGBQ92521 554 aa16.54■□□□□ 0.24
SUPT20H-204ENST00000464572 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
SUPT20H-204ENST00000464572 RGS12O14924 1447 aa16.53■□□□□ 0.24
SUPT20H-204ENST00000464572 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
SUPT20H-204ENST00000464572 KRT24Q2M2I5 525 aa16.53■□□□□ 0.24
SUPT20H-204ENST00000464572 ZNF790Q6PG37 636 aa16.53■□□□□ 0.24
SUPT20H-204ENST00000464572 ITGB4P16144 1822 aa16.52■□□□□ 0.24
SUPT20H-204ENST00000464572 KCNQ2O43526 872 aa16.52■□□□□ 0.24
SUPT20H-204ENST00000464572 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
SUPT20H-204ENST00000464572 BCL9O00512 1426 aa16.52■□□□□ 0.23
SUPT20H-204ENST00000464572 TSPYL6Q8N831 410 aa16.52■□□□□ 0.23
SUPT20H-204ENST00000464572 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
SUPT20H-204ENST00000464572 EIF4A1P60842 406 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-204ENST00000464572 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
SUPT20H-204ENST00000464572 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
SUPT20H-204ENST00000464572 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-204ENST00000464572 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
SUPT20H-204ENST00000464572 EP400Q96L91 3159 aa16.49■□□□□ 0.23
SUPT20H-204ENST00000464572 ZNF496Q96IT1 587 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-204ENST00000464572 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
SUPT20H-204ENST00000464572 ATG3Q9NT62 314 aa16.48■□□□□ 0.23
SUPT20H-204ENST00000464572 VAMP4O75379 141 aa16.48■□□□□ 0.23
SUPT20H-204ENST00000464572 RCAN3Q9UKA8 241 aa16.48■□□□□ 0.23
SUPT20H-204ENST00000464572 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
SUPT20H-204ENST00000464572 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
SUPT20H-204ENST00000464572 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.23
SUPT20H-204ENST00000464572 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
SUPT20H-204ENST00000464572 PAPPAQ13219 1627 aa16.45■□□□□ 0.22
SUPT20H-204ENST00000464572 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
SUPT20H-204ENST00000464572 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
SUPT20H-204ENST00000464572 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
SUPT20H-204ENST00000464572 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
SUPT20H-204ENST00000464572 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
SUPT20H-204ENST00000464572 TRIM37O94972 964 aa16.44■□□□□ 0.22
SUPT20H-204ENST00000464572 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
SUPT20H-204ENST00000464572 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 SNRPA1P09661 255 aaKnown RBP16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
SUPT20H-204ENST00000464572 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 SOS1Q07889 1333 aaPredicted RBP16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 BCAR3O75815 825 aa16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 HOXB7P09629 217 aa16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
SUPT20H-204ENST00000464572 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
SUPT20H-204ENST00000464572 HDGFL1Q5TGJ6 251 aa16.41■□□□□ 0.22
SUPT20H-204ENST00000464572 BTAF1O14981 1849 aa16.41■□□□□ 0.22
SUPT20H-204ENST00000464572 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
SUPT20H-204ENST00000464572 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
SUPT20H-204ENST00000464572 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
SUPT20H-204ENST00000464572 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
SUPT20H-204ENST00000464572 CCDC30Q5VVM6 783 aa16.39■□□□□ 0.21
SUPT20H-204ENST00000464572 VSIG10Q8N0Z9 540 aa16.39■□□□□ 0.21
SUPT20H-204ENST00000464572 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
SUPT20H-204ENST00000464572 SIK1P57059 783 aa16.39■□□□□ 0.21
SUPT20H-204ENST00000464572 C5P01031 1676 aa16.38■□□□□ 0.21
SUPT20H-204ENST00000464572 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
SUPT20H-204ENST00000464572 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
SUPT20H-204ENST00000464572 STK31Q9BXU1 1019 aa16.38■□□□□ 0.21
SUPT20H-204ENST00000464572 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
SUPT20H-204ENST00000464572 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
SUPT20H-204ENST00000464572 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
SUPT20H-204ENST00000464572 TEX13AQ9BXU3 409 aaPredicted RBP16.36■□□□□ 0.21
SUPT20H-204ENST00000464572 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
SUPT20H-204ENST00000464572 CHPF2Q9P2E5 772 aa16.36■□□□□ 0.21
SUPT20H-204ENST00000464572 PLIN1O60240 522 aa16.35■□□□□ 0.21
SUPT20H-204ENST00000464572 KCNQ4P56696 695 aa16.35■□□□□ 0.21
SUPT20H-204ENST00000464572 ANXA1P04083 346 aa16.35■□□□□ 0.21
SUPT20H-204ENST00000464572 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
SUPT20H-204ENST00000464572 STARD3NLO95772 234 aa16.34■□□□□ 0.21
SUPT20H-204ENST00000464572 APBA3O96018 575 aa16.34■□□□□ 0.21
SUPT20H-204ENST00000464572 RRP1P56182 461 aaKnown RBP16.34■□□□□ 0.21
SUPT20H-204ENST00000464572 ITPK1Q13572 414 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms