RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
VAPB-203ENST00000463370 COL18A1P39060 1754 aa16.12■□□□□ 0.17
VAPB-203ENST00000463370 CSB-PGBD3P0DP91 1061 aa16.12■□□□□ 0.17
VAPB-203ENST00000463370 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
VAPB-203ENST00000463370 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
VAPB-203ENST00000463370 MEGF6O75095 1541 aa16.12■□□□□ 0.17
VAPB-203ENST00000463370 SOS2Q07890 1332 aaPredicted RBP16.12■□□□□ 0.17
VAPB-203ENST00000463370 FKBP5Q13451 457 aaPredicted RBP16.12■□□□□ 0.17
VAPB-203ENST00000463370 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
VAPB-203ENST00000463370 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
VAPB-203ENST00000463370 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
VAPB-203ENST00000463370 CRYBG1Q9Y4K1 1723 aa16.11■□□□□ 0.17
VAPB-203ENST00000463370 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
VAPB-203ENST00000463370 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
VAPB-203ENST00000463370 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
VAPB-203ENST00000463370 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
VAPB-203ENST00000463370 CPDO75976 1380 aa16.1■□□□□ 0.17
VAPB-203ENST00000463370 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
VAPB-203ENST00000463370 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
VAPB-203ENST00000463370 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
VAPB-203ENST00000463370 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
VAPB-203ENST00000463370 ANXA1P04083 346 aa16.08■□□□□ 0.17
VAPB-203ENST00000463370 ANKRD44Q8N8A2 993 aa16.08■□□□□ 0.17
VAPB-203ENST00000463370 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.17
VAPB-203ENST00000463370 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
VAPB-203ENST00000463370 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
VAPB-203ENST00000463370 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
VAPB-203ENST00000463370 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
VAPB-203ENST00000463370 PHKG2P15735 406 aa16.07■□□□□ 0.16
VAPB-203ENST00000463370 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
VAPB-203ENST00000463370 DCTPP1Q9H773 170 aa16.06■□□□□ 0.16
VAPB-203ENST00000463370 PRDM11Q9NQV5 511 aa16.06■□□□□ 0.16
VAPB-203ENST00000463370 CYP27B1O15528 508 aa16.05■□□□□ 0.16
VAPB-203ENST00000463370 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
VAPB-203ENST00000463370 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
VAPB-203ENST00000463370 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
VAPB-203ENST00000463370 HOXB7P09629 217 aa16.05■□□□□ 0.16
VAPB-203ENST00000463370 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
VAPB-203ENST00000463370 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
VAPB-203ENST00000463370 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
VAPB-203ENST00000463370 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
VAPB-203ENST00000463370 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
VAPB-203ENST00000463370 NFATC2IPQ8NCF5 419 aa16.04■□□□□ 0.16
VAPB-203ENST00000463370 ABCC6O95255 1503 aa16.03■□□□□ 0.16
VAPB-203ENST00000463370 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
VAPB-203ENST00000463370 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
VAPB-203ENST00000463370 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
VAPB-203ENST00000463370 C16orf71Q8IYS4 520 aaPredicted RBP16.02■□□□□ 0.16
VAPB-203ENST00000463370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.162e-8■□□□□ 10.4
VAPB-203ENST00000463370 APBB1O00213 710 aa16.02■□□□□ 0.15
VAPB-203ENST00000463370 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.15
VAPB-203ENST00000463370 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 SMARCA5O60264 1052 aaPredicted RBP16.01■□□□□ 0.15
VAPB-203ENST00000463370 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 PI4KAP2A4QPH2 592 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 GNAI2P04899 355 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 TOM1L2Q6ZVM7 507 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 PI4KAP1Q8N8J0 262 aa16.01■□□□□ 0.15
VAPB-203ENST00000463370 OTUD7AQ8TE49 926 aaPredicted RBP16.01■□□□□ 0.15
VAPB-203ENST00000463370 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
VAPB-203ENST00000463370 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
VAPB-203ENST00000463370 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
VAPB-203ENST00000463370 ADCY9O60503 1353 aa15.99■□□□□ 0.15
VAPB-203ENST00000463370 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
VAPB-203ENST00000463370 LRRFIP2Q9Y608 721 aaKnown RBP15.99■□□□□ 0.15
VAPB-203ENST00000463370 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
VAPB-203ENST00000463370 DBF4Q9UBU7 674 aaPredicted RBP15.99■□□□□ 0.15
VAPB-203ENST00000463370 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
VAPB-203ENST00000463370 BMP2KLQ5H9B9 411 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 BEND3Q5T5X7 828 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 LARP1Q6PKG0 1096 aaKnown RBP15.98■□□□□ 0.15
VAPB-203ENST00000463370 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 TBC1D32Q96NH3 1257 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 GNAI3P08754 354 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
VAPB-203ENST00000463370 MFAP1P55081 439 aaKnown RBP15.98■□□□□ 0.15
VAPB-203ENST00000463370 DNAAF4Q8WXU2 420 aa15.98■□□□□ 0.15
VAPB-203ENST00000463370 PDIA6Q15084 440 aa15.97■□□□□ 0.15
VAPB-203ENST00000463370 ZNF496Q96IT1 587 aaPredicted RBP15.97■□□□□ 0.15
VAPB-203ENST00000463370 SRCIN1Q9C0H9 1055 aa15.97■□□□□ 0.15
VAPB-203ENST00000463370 EXOC6BQ9Y2D4 811 aa15.97■□□□□ 0.15
VAPB-203ENST00000463370 NHSL1Q5SYE7 1610 aa15.96■□□□□ 0.15
VAPB-203ENST00000463370 ABCA3Q99758 1704 aa15.96■□□□□ 0.15
VAPB-203ENST00000463370 NBPF7P0C2Y1 421 aaPredicted RBP15.96■□□□□ 0.15
VAPB-203ENST00000463370 HMMRO75330 724 aa15.95■□□□□ 0.14
VAPB-203ENST00000463370 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
VAPB-203ENST00000463370 UBTFL1P0CB47 393 aaPredicted RBP15.95■□□□□ 0.14
VAPB-203ENST00000463370 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
VAPB-203ENST00000463370 MAP3K2Q9Y2U5 619 aa15.95■□□□□ 0.14
VAPB-203ENST00000463370 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
VAPB-203ENST00000463370 MRC1P22897 1456 aa15.94■□□□□ 0.14
VAPB-203ENST00000463370 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
VAPB-203ENST00000463370 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
VAPB-203ENST00000463370 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
VAPB-203ENST00000463370 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
VAPB-203ENST00000463370 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
VAPB-203ENST00000463370 CHMP4AQ9BY43 222 aa15.94■□□□□ 0.14
VAPB-203ENST00000463370 CABP4P57796 275 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms