RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 PHACTR3Q96KR7 559 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 SPON1Q9HCB6 807 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 TJP1Q07157 1748 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 PHF14O94880 888 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 SIK1P57059 783 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
TMEM254-208ENST00000463209 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
TMEM254-208ENST00000463209 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
TMEM254-208ENST00000463209 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 MRC1P22897 1456 aa11.57□□□□□ -0.56
TMEM254-208ENST00000463209 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
TMEM254-208ENST00000463209 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
TMEM254-208ENST00000463209 PTGER2P43116 358 aa11.56□□□□□ -0.56
TMEM254-208ENST00000463209 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
TMEM254-208ENST00000463209 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
TMEM254-208ENST00000463209 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
TMEM254-208ENST00000463209 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
TMEM254-208ENST00000463209 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
TMEM254-208ENST00000463209 RNMTO43148 476 aaKnown RBP11.55□□□□□ -0.56
TMEM254-208ENST00000463209 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
TMEM254-208ENST00000463209 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
TMEM254-208ENST00000463209 COL23A1Q86Y22 540 aaPredicted RBP11.55□□□□□ -0.56
TMEM254-208ENST00000463209 MAP3K5Q99683 1374 aa11.54□□□□□ -0.56
TMEM254-208ENST00000463209 SIPA1L3O60292 1781 aaPredicted RBP11.54□□□□□ -0.56
TMEM254-208ENST00000463209 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
TMEM254-208ENST00000463209 SLC39A6Q13433 755 aa11.54□□□□□ -0.56
TMEM254-208ENST00000463209 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
TMEM254-208ENST00000463209 AK7Q96M32 723 aa11.54□□□□□ -0.56
TMEM254-208ENST00000463209 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
TMEM254-208ENST00000463209 COL24A1Q17RW2 1714 aa11.53□□□□□ -0.56
TMEM254-208ENST00000463209 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
TMEM254-208ENST00000463209 MTFR1LQ9H019 292 aa11.53□□□□□ -0.56
TMEM254-208ENST00000463209 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
TMEM254-208ENST00000463209 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
TMEM254-208ENST00000463209 DLG5Q8TDM6 1919 aa11.52□□□□□ -0.56
TMEM254-208ENST00000463209 ZNF831Q5JPB2 1677 aa11.52□□□□□ -0.56
TMEM254-208ENST00000463209 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
TMEM254-208ENST00000463209 GNPATO15228 680 aa11.52□□□□□ -0.57
TMEM254-208ENST00000463209 SGIP1Q9BQI5 828 aa11.52□□□□□ -0.57
TMEM254-208ENST00000463209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
TMEM254-208ENST00000463209 GNAT3A8MTJ3 354 aa11.51□□□□□ -0.57
TMEM254-208ENST00000463209 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
TMEM254-208ENST00000463209 MCM10Q7L590 875 aa11.51□□□□□ -0.57
TMEM254-208ENST00000463209 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
TMEM254-208ENST00000463209 GAS2L2Q8NHY3 880 aa11.51□□□□□ -0.57
TMEM254-208ENST00000463209 C4AP0C0L4 1744 aa11.51□□□□□ -0.57
TMEM254-208ENST00000463209 MYH14Q7Z406 1995 aaKnown RBP11.5□□□□□ -0.57
TMEM254-208ENST00000463209 CICQ96RK0 1608 aaPredicted RBP11.5□□□□□ -0.57
TMEM254-208ENST00000463209 RALBP1Q15311 655 aa11.5□□□□□ -0.57
TMEM254-208ENST00000463209 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
TMEM254-208ENST00000463209 MYBBP1AQ9BQG0 1328 aaKnown RBP11.5□□□□□ -0.57
TMEM254-208ENST00000463209 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
TMEM254-208ENST00000463209 ARXQ96QS3 562 aa11.49□□□□□ -0.57
TMEM254-208ENST00000463209 KCNQ3O43525 872 aa11.48□□□□□ -0.57
TMEM254-208ENST00000463209 FCHSD2O94868 740 aa11.48□□□□□ -0.57
TMEM254-208ENST00000463209 TEFQ10587 303 aa11.48□□□□□ -0.57
TMEM254-208ENST00000463209 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
TMEM254-208ENST00000463209 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
TMEM254-208ENST00000463209 THUMPD2Q9BTF0 503 aaKnown RBP11.48□□□□□ -0.57
TMEM254-208ENST00000463209 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
TMEM254-208ENST00000463209 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
TMEM254-208ENST00000463209 PLEKHF1Q96S99 279 aa11.47□□□□□ -0.57
TMEM254-208ENST00000463209 CEMIPQ8WUJ3 1361 aa11.46□□□□□ -0.57
TMEM254-208ENST00000463209 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.57
TMEM254-208ENST00000463209 POLD1P28340 1107 aa11.46□□□□□ -0.57
TMEM254-208ENST00000463209 SLC16A10Q8TF71 515 aa11.46□□□□□ -0.57
TMEM254-208ENST00000463209 ZNF496Q96IT1 587 aaPredicted RBP11.46□□□□□ -0.57
TMEM254-208ENST00000463209 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.57
TMEM254-208ENST00000463209 SSFA2P28290 1259 aa11.45□□□□□ -0.58
TMEM254-208ENST00000463209 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
TMEM254-208ENST00000463209 INTS5Q6P9B9 1019 aaKnown RBP11.45□□□□□ -0.58
TMEM254-208ENST00000463209 TTC5Q8N0Z6 440 aa11.45□□□□□ -0.58
TMEM254-208ENST00000463209 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
TMEM254-208ENST00000463209 SYT17Q9BSW7 474 aa11.45□□□□□ -0.58
TMEM254-208ENST00000463209 MIS18AQ9NYP9 233 aa11.45□□□□□ -0.58
TMEM254-208ENST00000463209 SRP68Q9UHB9 627 aaKnown RBP11.45□□□□□ -0.58
TMEM254-208ENST00000463209 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
TMEM254-208ENST00000463209 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
TMEM254-208ENST00000463209 MAPK8IP3Q9UPT6 1336 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 BTBD11A6QL63 1104 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 FLAD1Q8NFF5 587 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
TMEM254-208ENST00000463209 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
TMEM254-208ENST00000463209 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
TMEM254-208ENST00000463209 CYP19A1P11511 503 aaPredicted RBP11.43□□□□□ -0.58
TMEM254-208ENST00000463209 PIP4K2AP48426 406 aaPredicted RBP11.43□□□□□ -0.58
TMEM254-208ENST00000463209 NFE2L2Q16236 605 aa11.43□□□□□ -0.58
TMEM254-208ENST00000463209 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
TMEM254-208ENST00000463209 CCDC87Q9NVE4 849 aa11.43□□□□□ -0.58
TMEM254-208ENST00000463209 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
TMEM254-208ENST00000463209 HEG1Q9ULI3 1381 aa11.42□□□□□ -0.58
TMEM254-208ENST00000463209 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
TMEM254-208ENST00000463209 NEFMP07197 916 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms