RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 ZNF142P52746 1687 aaPredicted RBP5.4□□□□□ -1.55
ERCC4-203ENST00000462862 KIF24Q5T7B8 1368 aa5.4□□□□□ -1.55
ERCC4-203ENST00000462862 PNPLA6Q8IY17 1366 aa5.4□□□□□ -1.55
ERCC4-203ENST00000462862 ADAMTS13Q76LX8 1427 aa5.4□□□□□ -1.55
ERCC4-203ENST00000462862 NUTM2FA1L443 756 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 COPS2P61201 443 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 CALD1Q05682 793 aaKnown RBP5.39□□□□□ -1.55
ERCC4-203ENST00000462862 NKX2-3Q8TAU0 364 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 ZNF428Q96B54 188 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 RUNDC1Q96C34 613 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 PRKD2Q9BZL6 878 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 SLC12A5Q9H2X9 1139 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.39□□□□□ -1.55
ERCC4-203ENST00000462862 ADAMTS8Q9UP79 889 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 IL16Q14005 1332 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 TTC21AQ8NDW8 1320 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 NKTRP30414 1462 aaKnown RBP5.39□□□□□ -1.55
ERCC4-203ENST00000462862 IQSEC2Q5JU85 1478 aa5.39□□□□□ -1.55
ERCC4-203ENST00000462862 CDK12Q9NYV4 1490 aaPredicted RBP5.39□□□□□ -1.55
ERCC4-203ENST00000462862 SETD1BQ9UPS6 1966 aaKnown RBP5.38□□□□□ -1.55
ERCC4-203ENST00000462862 CEP170BQ9Y4F5 1589 aaPredicted RBP5.38□□□□□ -1.55
ERCC4-203ENST00000462862 C3P01024 1663 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 PLEKHG3A1L390 1219 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 GFRA3O60609 400 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 MS4A1P11836 297 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 HAP1P54257 671 aaPredicted RBP5.38□□□□□ -1.55
ERCC4-203ENST00000462862 RRP1P56182 461 aaKnown RBP5.38□□□□□ -1.55
ERCC4-203ENST00000462862 TRMT2AQ8IZ69 625 aaKnown RBP5.38□□□□□ -1.55
ERCC4-203ENST00000462862 CDK19Q9BWU1 502 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 MYH16Q9H6N6 1097 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 PPIP5K1Q6PFW1 1433 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 CD163L1Q9NR16 1453 aa5.38□□□□□ -1.55
ERCC4-203ENST00000462862 RIMS1Q86UR5 1692 aaKnown RBP5.37□□□□□ -1.55
ERCC4-203ENST00000462862 SEMA3EO15041 775 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 FCHSD2O94868 740 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 DNAJB2P25686 324 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 LMOD3Q0VAK6 560 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 MLECQ14165 292 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 LAPTM4AQ15012 233 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 TXNDC2Q86VQ3 553 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 RBM46Q8TBY0 533 aaKnown RBP5.37□□□□□ -1.55
ERCC4-203ENST00000462862 MINK1Q8N4C8 1332 aaPredicted RBP5.37□□□□□ -1.55
ERCC4-203ENST00000462862 METP08581 1390 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 NCOA3Q9Y6Q9 1424 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 ITSN1Q15811 1721 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 KIF20BQ96Q89 1820 aa5.37□□□□□ -1.55
ERCC4-203ENST00000462862 FYB1O15117 783 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 ZPR1O75312 459 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 MTHFSP49914 203 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 SLFN5Q08AF3 891 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 FAM161AQ3B820 660 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 DUSP27Q5VZP5 1158 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 ANKLE2Q86XL3 938 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 PRR14Q9BWN1 585 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 CHMP4BQ9H444 224 aaKnown RBP5.36□□□□□ -1.55
ERCC4-203ENST00000462862 STK26Q9P289 416 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 ADGRG1Q9Y653 693 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 TTC21BQ7Z4L5 1316 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 MAPK8IP3Q9UPT6 1336 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 ADAMTSL3P82987 1691 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 TOPAZ1Q8N9V7 1692 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 MON2Q7Z3U7 1717 aa5.36□□□□□ -1.55
ERCC4-203ENST00000462862 XRN1Q8IZH2 1706 aaKnown RBP5.36□□□□□ -1.55
ERCC4-203ENST00000462862 SHPRHQ149N8 1683 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
ERCC4-203ENST00000462862 USP31Q70CQ4 1352 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 PLEKHG2Q9H7P9 1386 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 RCCD1A6NED2 376 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 DIAPH1O60610 1272 aaKnown RBP5.35□□□□□ -1.55
ERCC4-203ENST00000462862 GGCXP38435 758 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 NUDT16Q96DE0 195 aaKnown RBP5.35□□□□□ -1.55
ERCC4-203ENST00000462862 COG3Q96JB2 828 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 CCDC136Q96JN2 1154 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 TMEM134Q9H6X4 195 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 CABP1Q9NZU7 370 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 PCDHB3Q9Y5E6 796 aa5.35□□□□□ -1.55
ERCC4-203ENST00000462862 V9GY48 417 aaPredicted RBP5.35□□□□□ -1.55
ERCC4-203ENST00000462862 USP6P35125 1406 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 PTPRUQ92729 1446 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 ROBO2Q9HCK4 1378 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 PLEKHH1Q9ULM0 1364 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 APAF1O14727 1248 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 NUTM2DQ5VT03 806 aaPredicted RBP5.34□□□□□ -1.55
ERCC4-203ENST00000462862 BLOC1S3Q6QNY0 202 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 WWC1Q8IX03 1113 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 BCANQ96GW7 911 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 CHMP4AQ9BY43 222 aa5.34□□□□□ -1.55
ERCC4-203ENST00000462862 AKAP12Q02952 1782 aa5.34□□□□□ -1.56
ERCC4-203ENST00000462862 USP54Q70EL1 1684 aa5.34□□□□□ -1.56
ERCC4-203ENST00000462862 NRKQ7Z2Y5 1582 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 OVOS2A0A0J9YW53 1432 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 DCCP43146 1447 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 OVOS2Q6IE36 1432 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 SSH2Q76I76 1423 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 RTL1A6NKG5 1358 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 U2AF1L5P0DN76 240 aaPredicted RBP5.33□□□□□ -1.56
ERCC4-203ENST00000462862 LTKP29376 864 aa5.33□□□□□ -1.56
ERCC4-203ENST00000462862 U2AF1Q01081 240 aaKnown RBP eCLIP5.33□□□□□ -1.56
ERCC4-203ENST00000462862 TRAF7Q6Q0C0 670 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms