RNA–Protein interactions for RNA: ENST00000462806.5

TUBA4A-208, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-208ENST00000462806 KAT6BQ8WYB5 2073 aa17.65■□□□□ 0.42
TUBA4A-208ENST00000462806 TNS1Q9HBL0 1735 aaKnown RBP17.65■□□□□ 0.42
TUBA4A-208ENST00000462806 SLC39A6Q13433 755 aa17.65■□□□□ 0.42
TUBA4A-208ENST00000462806 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
TUBA4A-208ENST00000462806 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
TUBA4A-208ENST00000462806 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
TUBA4A-208ENST00000462806 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
TUBA4A-208ENST00000462806 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
TUBA4A-208ENST00000462806 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
TUBA4A-208ENST00000462806 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
TUBA4A-208ENST00000462806 BTBD11A6QL63 1104 aa17.63■□□□□ 0.41
TUBA4A-208ENST00000462806 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
TUBA4A-208ENST00000462806 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
TUBA4A-208ENST00000462806 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
TUBA4A-208ENST00000462806 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
TUBA4A-208ENST00000462806 AK7Q96M32 723 aa17.61■□□□□ 0.41
TUBA4A-208ENST00000462806 TAF7Q15545 349 aaPredicted RBP17.6■□□□□ 0.41
TUBA4A-208ENST00000462806 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
TUBA4A-208ENST00000462806 MIS18AQ9NYP9 233 aa17.6■□□□□ 0.41
TUBA4A-208ENST00000462806 SENP3-EIF4A1A0A087X0R7 540 aa17.59■□□□□ 0.41
TUBA4A-208ENST00000462806 ZNF827Q17R98 1081 aa17.59■□□□□ 0.41
TUBA4A-208ENST00000462806 PNISRQ8TF01 805 aaKnown RBP17.59■□□□□ 0.41
TUBA4A-208ENST00000462806 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
TUBA4A-208ENST00000462806 APAF1O14727 1248 aa17.58■□□□□ 0.4
TUBA4A-208ENST00000462806 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.4
TUBA4A-208ENST00000462806 ITPK1Q13572 414 aa17.58■□□□□ 0.4
TUBA4A-208ENST00000462806 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
TUBA4A-208ENST00000462806 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
TUBA4A-208ENST00000462806 PHF14O94880 888 aa17.57■□□□□ 0.4
TUBA4A-208ENST00000462806 ZBTB7AO95365 584 aa17.57■□□□□ 0.4
TUBA4A-208ENST00000462806 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
TUBA4A-208ENST00000462806 LINC00116Q8NCU8 138 aa17.57■□□□□ 0.4
TUBA4A-208ENST00000462806 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
TUBA4A-208ENST00000462806 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
TUBA4A-208ENST00000462806 PDGFDQ9GZP0 370 aaPredicted RBP17.56■□□□□ 0.4
TUBA4A-208ENST00000462806 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 NHSQ6T4R5 1651 aa17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 GNPATO15228 680 aa17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 KCNQ3O43525 872 aa17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 SMIM5Q71RC9 77 aa17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
TUBA4A-208ENST00000462806 DNAJC10Q8IXB1 793 aa17.54■□□□□ 0.4
TUBA4A-208ENST00000462806 FLAD1Q8NFF5 587 aa17.54■□□□□ 0.4
TUBA4A-208ENST00000462806 SPON1Q9HCB6 807 aa17.54■□□□□ 0.4
TUBA4A-208ENST00000462806 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
TUBA4A-208ENST00000462806 STARD3NLO95772 234 aa17.53■□□□□ 0.4
TUBA4A-208ENST00000462806 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
TUBA4A-208ENST00000462806 ZNF496Q96IT1 587 aaPredicted RBP17.53■□□□□ 0.4
TUBA4A-208ENST00000462806 RTCBQ9Y3I0 505 aaKnown RBP17.53■□□□□ 0.4
TUBA4A-208ENST00000462806 SHANK3Q9BYB0 1731 aa17.52■□□□□ 0.4
TUBA4A-208ENST00000462806 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
TUBA4A-208ENST00000462806 ARXQ96QS3 562 aa17.52■□□□□ 0.4
TUBA4A-208ENST00000462806 TEX13AQ9BXU3 409 aaPredicted RBP17.52■□□□□ 0.4
TUBA4A-208ENST00000462806 PPP1R1BQ9UD71 204 aaPredicted RBP17.52■□□□□ 0.4
TUBA4A-208ENST00000462806 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.39
TUBA4A-208ENST00000462806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 RC3H1Q5TC82 1133 aaKnown RBP17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 BTAF1O14981 1849 aa17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 RREB1Q92766 1687 aa17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
TUBA4A-208ENST00000462806 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
TUBA4A-208ENST00000462806 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
TUBA4A-208ENST00000462806 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
TUBA4A-208ENST00000462806 NUP188Q5SRE5 1749 aa17.5■□□□□ 0.39
TUBA4A-208ENST00000462806 PNPLA7Q6ZV29 1317 aa17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 RFC4P35249 363 aa17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 MIER1Q8N108 512 aa17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 SLC16A10Q8TF71 515 aa17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
TUBA4A-208ENST00000462806 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
TUBA4A-208ENST00000462806 MTFR1LQ9H019 292 aa17.48■□□□□ 0.39
TUBA4A-208ENST00000462806 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
TUBA4A-208ENST00000462806 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
TUBA4A-208ENST00000462806 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
TUBA4A-208ENST00000462806 INTS5Q6P9B9 1019 aaKnown RBP17.47■□□□□ 0.39
TUBA4A-208ENST00000462806 ARHGEF1Q92888 912 aaKnown RBP17.47■□□□□ 0.39
TUBA4A-208ENST00000462806 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
TUBA4A-208ENST00000462806 A1BGP04217 495 aa17.46■□□□□ 0.39
TUBA4A-208ENST00000462806 SSFA2P28290 1259 aa17.46■□□□□ 0.39
TUBA4A-208ENST00000462806 POLD1P28340 1107 aa17.46■□□□□ 0.39
TUBA4A-208ENST00000462806 HEG1Q9ULI3 1381 aa17.45■□□□□ 0.38
TUBA4A-208ENST00000462806 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
TUBA4A-208ENST00000462806 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
TUBA4A-208ENST00000462806 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
TUBA4A-208ENST00000462806 TOGARAM1Q9Y4F4 1720 aa17.44■□□□□ 0.38
TUBA4A-208ENST00000462806 PRAMEF22A3QJZ6 481 aa17.44■□□□□ 0.38
TUBA4A-208ENST00000462806 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
TUBA4A-208ENST00000462806 KLHL34Q8N239 644 aa17.44■□□□□ 0.38
TUBA4A-208ENST00000462806 ZPR1O75312 459 aa17.43■□□□□ 0.38
TUBA4A-208ENST00000462806 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
TUBA4A-208ENST00000462806 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
TUBA4A-208ENST00000462806 CHL1O00533 1208 aa17.42■□□□□ 0.38
TUBA4A-208ENST00000462806 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
TUBA4A-208ENST00000462806 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms