RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 C4BP0C0L5 1744 aa24.75■■□□□ 1.55
CDKN1A-206ENST00000462537 GAS2L2Q8NHY3 880 aa24.74■■□□□ 1.55
CDKN1A-206ENST00000462537 LGR6Q9HBX8 967 aa24.74■■□□□ 1.55
CDKN1A-206ENST00000462537 PPP1R1BQ9UD71 204 aaPredicted RBP24.74■■□□□ 1.55
CDKN1A-206ENST00000462537 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
CDKN1A-206ENST00000462537 PNPLA7Q6ZV29 1317 aa24.73■■□□□ 1.55
CDKN1A-206ENST00000462537 RNMTO43148 476 aaKnown RBP24.73■■□□□ 1.55
CDKN1A-206ENST00000462537 ATP6V1AP38606 617 aa24.73■■□□□ 1.55
CDKN1A-206ENST00000462537 RBM42Q9BTD8 480 aaKnown RBP24.73■■□□□ 1.55
CDKN1A-206ENST00000462537 MAP3K5Q99683 1374 aa24.71■■□□□ 1.55
CDKN1A-206ENST00000462537 MSH5O43196 834 aa24.71■■□□□ 1.55
CDKN1A-206ENST00000462537 PHACTR3Q96KR7 559 aa24.71■■□□□ 1.55
CDKN1A-206ENST00000462537 AK7Q96M32 723 aa24.71■■□□□ 1.55
CDKN1A-206ENST00000462537 MTFR1LQ9H019 292 aa24.71■■□□□ 1.55
CDKN1A-206ENST00000462537 SLC52A2Q9HAB3 445 aa24.71■■□□□ 1.55
CDKN1A-206ENST00000462537 ADAMTS7Q9UKP4 1686 aa24.7■■□□□ 1.54
CDKN1A-206ENST00000462537 FCHSD2O94868 740 aa24.7■■□□□ 1.54
CDKN1A-206ENST00000462537 MYBBP1AQ9BQG0 1328 aaKnown RBP24.69■■□□□ 1.54
CDKN1A-206ENST00000462537 GNAT3A8MTJ3 354 aa24.69■■□□□ 1.54
CDKN1A-206ENST00000462537 LINC00116Q8NCU8 138 aa24.69■■□□□ 1.54
CDKN1A-206ENST00000462537 MRC1P22897 1456 aa24.69■■□□□ 1.54
CDKN1A-206ENST00000462537 ITPK1Q13572 414 aa24.68■■□□□ 1.54
CDKN1A-206ENST00000462537 ZNF831Q5JPB2 1677 aa24.67■■□□□ 1.54
CDKN1A-206ENST00000462537 PTCD1O75127 700 aaKnown RBP24.67■■□□□ 1.54
CDKN1A-206ENST00000462537 NEFMP07197 916 aa24.66■■□□□ 1.54
CDKN1A-206ENST00000462537 SLC16A10Q8TF71 515 aa24.66■■□□□ 1.54
CDKN1A-206ENST00000462537 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
CDKN1A-206ENST00000462537 PTGER2P43116 358 aa24.65■■□□□ 1.54
CDKN1A-206ENST00000462537 UBR3Q6ZT12 1888 aa24.65■■□□□ 1.54
CDKN1A-206ENST00000462537 COL23A1Q86Y22 540 aaPredicted RBP24.65■■□□□ 1.54
CDKN1A-206ENST00000462537 PHF14O94880 888 aa24.64■■□□□ 1.54
CDKN1A-206ENST00000462537 TEFQ10587 303 aa24.64■■□□□ 1.54
CDKN1A-206ENST00000462537 FLAD1Q8NFF5 587 aa24.64■■□□□ 1.54
CDKN1A-206ENST00000462537 SLC4A9Q96Q91 983 aa24.64■■□□□ 1.54
CDKN1A-206ENST00000462537 COL5A3P25940 1745 aaPredicted RBP24.64■■□□□ 1.53
CDKN1A-206ENST00000462537 GNPATO15228 680 aa24.62■■□□□ 1.53
CDKN1A-206ENST00000462537 SLC39A6Q13433 755 aa24.62■■□□□ 1.53
CDKN1A-206ENST00000462537 IL17REQ8NFR9 667 aa24.62■■□□□ 1.53
CDKN1A-206ENST00000462537 RTF1Q92541 710 aaKnown RBP24.61■■□□□ 1.53
CDKN1A-206ENST00000462537 PRKRIP1Q9H875 184 aaPredicted RBP24.61■■□□□ 1.53
CDKN1A-206ENST00000462537 TJP1Q07157 1748 aa24.61■■□□□ 1.53
CDKN1A-206ENST00000462537 SIPA1L3O60292 1781 aaPredicted RBP24.6■■□□□ 1.53
CDKN1A-206ENST00000462537 POLD1P28340 1107 aa24.6■■□□□ 1.53
CDKN1A-206ENST00000462537 PNNQ9H307 717 aaKnown RBP24.6■■□□□ 1.53
CDKN1A-206ENST00000462537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.59■■□□□ 1.53
CDKN1A-206ENST00000462537 SMIM5Q71RC9 77 aa24.59■■□□□ 1.53
CDKN1A-206ENST00000462537 AMIGO3Q86WK7 504 aa24.59■■□□□ 1.53
CDKN1A-206ENST00000462537 SGIP1Q9BQI5 828 aa24.59■■□□□ 1.53
CDKN1A-206ENST00000462537 SSFA2P28290 1259 aa24.58■■□□□ 1.53
CDKN1A-206ENST00000462537 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
CDKN1A-206ENST00000462537 MAPK8IP3Q9UPT6 1336 aa24.58■■□□□ 1.52
CDKN1A-206ENST00000462537 COL24A1Q17RW2 1714 aa24.58■■□□□ 1.52
CDKN1A-206ENST00000462537 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
CDKN1A-206ENST00000462537 MSL1Q68DK7 614 aa24.57■■□□□ 1.52
CDKN1A-206ENST00000462537 ARXQ96QS3 562 aa24.57■■□□□ 1.52
CDKN1A-206ENST00000462537 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
CDKN1A-206ENST00000462537 KCPQ6ZWJ8 1503 aa24.56■■□□□ 1.52
CDKN1A-206ENST00000462537 CEMIPQ8WUJ3 1361 aa24.56■■□□□ 1.52
CDKN1A-206ENST00000462537 MCM10Q7L590 875 aa24.56■■□□□ 1.52
CDKN1A-206ENST00000462537 RTCBQ9Y3I0 505 aaKnown RBP24.56■■□□□ 1.52
CDKN1A-206ENST00000462537 DLG5Q8TDM6 1919 aa24.56■■□□□ 1.52
CDKN1A-206ENST00000462537 CNTNAP4Q9C0A0 1308 aa24.56■■□□□ 1.52
CDKN1A-206ENST00000462537 RC3H1Q5TC82 1133 aaKnown RBP24.55■■□□□ 1.52
CDKN1A-206ENST00000462537 PLEKHF1Q96S99 279 aa24.55■■□□□ 1.52
CDKN1A-206ENST00000462537 CRKLP46109 303 aaKnown RBP24.53■■□□□ 1.52
CDKN1A-206ENST00000462537 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
CDKN1A-206ENST00000462537 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
CDKN1A-206ENST00000462537 DNAJC10Q8IXB1 793 aa24.53■■□□□ 1.52
CDKN1A-206ENST00000462537 FHDC1Q9C0D6 1143 aaPredicted RBP24.53■■□□□ 1.52
CDKN1A-206ENST00000462537 BTBD11A6QL63 1104 aa24.52■■□□□ 1.52
CDKN1A-206ENST00000462537 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
CDKN1A-206ENST00000462537 NFE2L2Q16236 605 aa24.52■■□□□ 1.52
CDKN1A-206ENST00000462537 KLHL34Q8N239 644 aa24.52■■□□□ 1.52
CDKN1A-206ENST00000462537 MYH14Q7Z406 1995 aaKnown RBP24.52■■□□□ 1.52
CDKN1A-206ENST00000462537 TRAPPC3LQ5T215 181 aa24.51■■□□□ 1.51
CDKN1A-206ENST00000462537 ZNF790Q6PG37 636 aa24.51■■□□□ 1.51
CDKN1A-206ENST00000462537 RPS6KA4O75676 772 aa24.5■■□□□ 1.51
CDKN1A-206ENST00000462537 VSIG10Q8N0Z9 540 aa24.5■■□□□ 1.51
CDKN1A-206ENST00000462537 C4AP0C0L4 1744 aa24.48■■□□□ 1.51
CDKN1A-206ENST00000462537 ADRA2BP18089 450 aa24.48■■□□□ 1.51
CDKN1A-206ENST00000462537 ZNF496Q96IT1 587 aaPredicted RBP24.48■■□□□ 1.51
CDKN1A-206ENST00000462537 CCDC87Q9NVE4 849 aa24.48■■□□□ 1.51
CDKN1A-206ENST00000462537 RFC4P35249 363 aa24.47■■□□□ 1.51
CDKN1A-206ENST00000462537 ARHGEF1Q92888 912 aaKnown RBP24.47■■□□□ 1.51
CDKN1A-206ENST00000462537 FMNL2Q96PY5 1086 aa24.47■■□□□ 1.51
CDKN1A-206ENST00000462537 SYT17Q9BSW7 474 aa24.47■■□□□ 1.51
CDKN1A-206ENST00000462537 HEG1Q9ULI3 1381 aa24.46■■□□□ 1.51
CDKN1A-206ENST00000462537 CYP19A1P11511 503 aaPredicted RBP24.46■■□□□ 1.51
CDKN1A-206ENST00000462537 CCDC146Q8IYE0 955 aa24.46■■□□□ 1.51
CDKN1A-206ENST00000462537 KCNQ3O43525 872 aa24.45■■□□□ 1.5
CDKN1A-206ENST00000462537 INTS5Q6P9B9 1019 aaKnown RBP24.45■■□□□ 1.5
CDKN1A-206ENST00000462537 DCAF8L1A6NGE4 600 aa24.44■■□□□ 1.5
CDKN1A-206ENST00000462537 STARD3NLO95772 234 aa24.43■■□□□ 1.5
CDKN1A-206ENST00000462537 TAF7Q15545 349 aaPredicted RBP24.43■■□□□ 1.5
CDKN1A-206ENST00000462537 ADAMTS8Q9UP79 889 aa24.43■■□□□ 1.5
CDKN1A-206ENST00000462537 ANP32CO43423 234 aa24.42■■□□□ 1.5
CDKN1A-206ENST00000462537 RIPK4P57078 832 aa24.42■■□□□ 1.5
CDKN1A-206ENST00000462537 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
CDKN1A-206ENST00000462537 RUNDC1Q96C34 613 aa24.41■■□□□ 1.5
CDKN1A-206ENST00000462537 THUMPD2Q9BTF0 503 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms