RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 VIRMAQ69YN4 1812 aaKnown RBP21.75■■□□□ 1.07
SNX21-206ENST00000462307 PPP2R1AP30153 589 aa21.74■■□□□ 1.07
SNX21-206ENST00000462307 ATP6V1AP38606 617 aa21.74■■□□□ 1.07
SNX21-206ENST00000462307 ITPK1Q13572 414 aa21.74■■□□□ 1.07
SNX21-206ENST00000462307 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
SNX21-206ENST00000462307 NFATC2IPQ8NCF5 419 aa21.74■■□□□ 1.07
SNX21-206ENST00000462307 LINC00116Q8NCU8 138 aa21.74■■□□□ 1.07
SNX21-206ENST00000462307 SLC4A9Q96Q91 983 aa21.74■■□□□ 1.07
SNX21-206ENST00000462307 SYT17Q9BSW7 474 aa21.73■■□□□ 1.07
SNX21-206ENST00000462307 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
SNX21-206ENST00000462307 FHDC1Q9C0D6 1143 aaPredicted RBP21.72■■□□□ 1.07
SNX21-206ENST00000462307 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
SNX21-206ENST00000462307 MAP3K5Q99683 1374 aa21.72■■□□□ 1.07
SNX21-206ENST00000462307 AK7Q96M32 723 aa21.71■■□□□ 1.07
SNX21-206ENST00000462307 CFAP53Q96M91 514 aa21.71■■□□□ 1.07
SNX21-206ENST00000462307 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
SNX21-206ENST00000462307 RNMTO43148 476 aaKnown RBP21.7■■□□□ 1.06
SNX21-206ENST00000462307 UTRNP46939 3433 aa21.7■■□□□ 1.06
SNX21-206ENST00000462307 U2SURPO15042 1029 aaKnown RBP21.69■■□□□ 1.06
SNX21-206ENST00000462307 SSFA2P28290 1259 aa21.69■■□□□ 1.06
SNX21-206ENST00000462307 POLD1P28340 1107 aa21.69■■□□□ 1.06
SNX21-206ENST00000462307 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
SNX21-206ENST00000462307 RC3H1Q5TC82 1133 aaKnown RBP21.68■■□□□ 1.06
SNX21-206ENST00000462307 MYH14Q7Z406 1995 aaKnown RBP21.68■■□□□ 1.06
SNX21-206ENST00000462307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.67■■□□□ 1.06
SNX21-206ENST00000462307 MSH5O43196 834 aa21.67■■□□□ 1.06
SNX21-206ENST00000462307 RBM42Q9BTD8 480 aaKnown RBP21.67■■□□□ 1.06
SNX21-206ENST00000462307 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
SNX21-206ENST00000462307 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
SNX21-206ENST00000462307 MRC1P22897 1456 aa21.66■■□□□ 1.06
SNX21-206ENST00000462307 RSPH6AQ9H0K4 717 aa21.66■■□□□ 1.06
SNX21-206ENST00000462307 GAS2L2Q8NHY3 880 aa21.65■■□□□ 1.06
SNX21-206ENST00000462307 CNTNAP4Q9C0A0 1308 aa21.64■■□□□ 1.05
SNX21-206ENST00000462307 FCHSD2O94868 740 aa21.64■■□□□ 1.05
SNX21-206ENST00000462307 SMIM5Q71RC9 77 aa21.64■■□□□ 1.05
SNX21-206ENST00000462307 CICQ96RK0 1608 aaPredicted RBP21.64■■□□□ 1.05
SNX21-206ENST00000462307 GNPATO15228 680 aa21.63■■□□□ 1.05
SNX21-206ENST00000462307 PTCD1O75127 700 aaKnown RBP21.63■■□□□ 1.05
SNX21-206ENST00000462307 PHACTR3Q96KR7 559 aa21.63■■□□□ 1.05
SNX21-206ENST00000462307 DCAF8L1A6NGE4 600 aa21.62■■□□□ 1.05
SNX21-206ENST00000462307 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
SNX21-206ENST00000462307 IL17REQ8NFR9 667 aa21.62■■□□□ 1.05
SNX21-206ENST00000462307 RPS6KA4O75676 772 aa21.61■■□□□ 1.05
SNX21-206ENST00000462307 PHF14O94880 888 aa21.61■■□□□ 1.05
SNX21-206ENST00000462307 PRKAR2BP31323 418 aa21.61■■□□□ 1.05
SNX21-206ENST00000462307 MSL1Q68DK7 614 aa21.61■■□□□ 1.05
SNX21-206ENST00000462307 RTCBQ9Y3I0 505 aaKnown RBP21.61■■□□□ 1.05
SNX21-206ENST00000462307 GOLGB1Q14789 3259 aaKnown RBP21.61■■□□□ 1.05
SNX21-206ENST00000462307 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
SNX21-206ENST00000462307 ADRA2BP18089 450 aa21.6■■□□□ 1.05
SNX21-206ENST00000462307 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
SNX21-206ENST00000462307 TRAPPC3LQ5T215 181 aa21.6■■□□□ 1.05
SNX21-206ENST00000462307 TJP1Q07157 1748 aa21.59■■□□□ 1.05
SNX21-206ENST00000462307 SLC39A6Q13433 755 aa21.59■■□□□ 1.05
SNX21-206ENST00000462307 DDX10Q13206 875 aaKnown RBP21.58■■□□□ 1.05
SNX21-206ENST00000462307 ARHGEF1Q92888 912 aaKnown RBP21.58■■□□□ 1.05
SNX21-206ENST00000462307 SIPA1L3O60292 1781 aaPredicted RBP21.58■■□□□ 1.04
SNX21-206ENST00000462307 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
SNX21-206ENST00000462307 CRKLP46109 303 aaKnown RBP21.57■■□□□ 1.04
SNX21-206ENST00000462307 RALBP1Q15311 655 aa21.57■■□□□ 1.04
SNX21-206ENST00000462307 VSIG10Q8N0Z9 540 aa21.57■■□□□ 1.04
SNX21-206ENST00000462307 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
SNX21-206ENST00000462307 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
SNX21-206ENST00000462307 INTS5Q6P9B9 1019 aaKnown RBP21.55■■□□□ 1.04
SNX21-206ENST00000462307 CD2APQ9Y5K6 639 aa21.55■■□□□ 1.04
SNX21-206ENST00000462307 DNAJC10Q8IXB1 793 aa21.54■■□□□ 1.04
SNX21-206ENST00000462307 NLGN2Q8NFZ4 835 aa21.54■■□□□ 1.04
SNX21-206ENST00000462307 CYP19A1P11511 503 aaPredicted RBP21.53■■□□□ 1.04
SNX21-206ENST00000462307 TEFQ10587 303 aa21.53■■□□□ 1.04
SNX21-206ENST00000462307 NLGN1Q8N2Q7 840 aa21.53■■□□□ 1.04
SNX21-206ENST00000462307 CHD4Q14839 1912 aa21.53■■□□□ 1.04
SNX21-206ENST00000462307 HTATSF1O43719 755 aaKnown RBP21.52■■□□□ 1.04
SNX21-206ENST00000462307 ZNF790Q6PG37 636 aa21.52■■□□□ 1.04
SNX21-206ENST00000462307 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
SNX21-206ENST00000462307 GYS1P13807 737 aa21.51■■□□□ 1.03
SNX21-206ENST00000462307 RFC4P35249 363 aa21.51■■□□□ 1.03
SNX21-206ENST00000462307 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
SNX21-206ENST00000462307 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
SNX21-206ENST00000462307 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
SNX21-206ENST00000462307 ZEB1P37275 1124 aaPredicted RBP21.49■■□□□ 1.03
SNX21-206ENST00000462307 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
SNX21-206ENST00000462307 MMP10P09238 476 aa21.48■■□□□ 1.03
SNX21-206ENST00000462307 YY1P25490 414 aa21.48■■□□□ 1.03
SNX21-206ENST00000462307 ZNF496Q96IT1 587 aaPredicted RBP21.48■■□□□ 1.03
SNX21-206ENST00000462307 DLG5Q8TDM6 1919 aa21.48■■□□□ 1.03
SNX21-206ENST00000462307 GPR162Q16538 588 aa21.47■■□□□ 1.03
SNX21-206ENST00000462307 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
SNX21-206ENST00000462307 TEX13AQ9BXU3 409 aaPredicted RBP21.47■■□□□ 1.03
SNX21-206ENST00000462307 SOS1Q07889 1333 aaPredicted RBP21.47■■□□□ 1.03
SNX21-206ENST00000462307 HEG1Q9ULI3 1381 aa21.47■■□□□ 1.03
SNX21-206ENST00000462307 KIF13BQ9NQT8 1826 aa21.46■■□□□ 1.03
SNX21-206ENST00000462307 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
SNX21-206ENST00000462307 PNNQ9H307 717 aaKnown RBP21.46■■□□□ 1.03
SNX21-206ENST00000462307 USP42Q9H9J4 1324 aaKnown RBP21.46■■□□□ 1.03
SNX21-206ENST00000462307 MCM10Q7L590 875 aa21.45■■□□□ 1.02
SNX21-206ENST00000462307 MYBBP1AQ9BQG0 1328 aaKnown RBP21.45■■□□□ 1.02
SNX21-206ENST00000462307 KCNQ3O43525 872 aa21.44■■□□□ 1.02
SNX21-206ENST00000462307 STARD3NLO95772 234 aa21.44■■□□□ 1.02
SNX21-206ENST00000462307 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
SNX21-206ENST00000462307 ZBTB1Q9Y2K1 713 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms