RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
VPS36-202ENST00000462289 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 SPDYE5A6NIY4 337 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 J3QL48 77 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 MS4A1P11836 297 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 FBXO31Q5XUX0 539 aaPredicted RBP8.63□□□□□ -1.03
VPS36-202ENST00000462289 ADGRB3O60242 1522 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 MED14O60244 1454 aa8.63□□□□□ -1.03
VPS36-202ENST00000462289 CLTCL1P53675 1640 aa8.62□□□□□ -1.03
VPS36-202ENST00000462289 UGGT1Q9NYU2 1555 aa8.62□□□□□ -1.03
VPS36-202ENST00000462289 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
VPS36-202ENST00000462289 MTMR2Q13614 643 aa8.62□□□□□ -1.03
VPS36-202ENST00000462289 AK7Q96M32 723 aa8.62□□□□□ -1.03
VPS36-202ENST00000462289 ITGAEP38570 1179 aa8.61□□□□□ -1.03
VPS36-202ENST00000462289 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
VPS36-202ENST00000462289 TBC1D2Q9BYX2 928 aa8.61□□□□□ -1.03
VPS36-202ENST00000462289 ESF1Q9H501 851 aaKnown RBP8.61□□□□□ -1.03
VPS36-202ENST00000462289 EVA1BQ9NVM1 165 aa8.61□□□□□ -1.03
VPS36-202ENST00000462289 KIF1BO60333 1816 aa8.6□□□□□ -1.03
VPS36-202ENST00000462289 SIAH2O43255 324 aa8.6□□□□□ -1.03
VPS36-202ENST00000462289 PRR7Q8TB68 274 aa8.6□□□□□ -1.03
VPS36-202ENST00000462289 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
VPS36-202ENST00000462289 ZFYVE9O95405 1425 aa8.6□□□□□ -1.03
VPS36-202ENST00000462289 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
VPS36-202ENST00000462289 SLC52A1Q9NWF4 448 aa8.59□□□□□ -1.03
VPS36-202ENST00000462289 SPTLC1O15269 473 aa8.58□□□□□ -1.04
VPS36-202ENST00000462289 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
VPS36-202ENST00000462289 HPS1Q92902 700 aa8.58□□□□□ -1.04
VPS36-202ENST00000462289 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
VPS36-202ENST00000462289 SPATA31E1Q6ZUB1 1445 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 SH3BP2P78314 561 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
VPS36-202ENST00000462289 IDI1Q13907 227 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 PPLO60437 1756 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 ANKRD30BQ9BXX2 1392 aa8.57□□□□□ -1.04
VPS36-202ENST00000462289 IQGAP1P46940 1657 aa8.56□□□□□ -1.04
VPS36-202ENST00000462289 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
VPS36-202ENST00000462289 NRXN3Q9Y4C0 1643 aa8.56□□□□□ -1.04
VPS36-202ENST00000462289 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
VPS36-202ENST00000462289 MPHOSPH9Q99550 1183 aa8.56□□□□□ -1.04
VPS36-202ENST00000462289 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
VPS36-202ENST00000462289 SETD1AO15047 1707 aaKnown RBP8.56□□□□□ -1.04
VPS36-202ENST00000462289 TMEM2Q9UHN6 1383 aa8.56□□□□□ -1.04
VPS36-202ENST00000462289 PDE4DQ08499 809 aa8.55□□□□□ -1.04
VPS36-202ENST00000462289 LYPD8Q6UX82 237 aa8.55□□□□□ -1.04
VPS36-202ENST00000462289 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
VPS36-202ENST00000462289 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
VPS36-202ENST00000462289 SETBP1Q9Y6X0 1596 aa8.54□□□□□ -1.04
VPS36-202ENST00000462289 C11orf95C9JLR9 678 aaPredicted RBP8.54□□□□□ -1.04
VPS36-202ENST00000462289 CFAP99D6REC4 459 aa8.54□□□□□ -1.04
VPS36-202ENST00000462289 ALDH1A1P00352 501 aa8.54□□□□□ -1.04
VPS36-202ENST00000462289 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
VPS36-202ENST00000462289 THEMISQ8N1K5 641 aaPredicted RBP8.54□□□□□ -1.04
VPS36-202ENST00000462289 ZBTB3Q9H5J0 574 aa8.54□□□□□ -1.04
VPS36-202ENST00000462289 LTBP4Q8N2S1 1624 aa8.54□□□□□ -1.04
VPS36-202ENST00000462289 STRCP1A6NGW2 1772 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 NRXN1Q9ULB1 1477 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 HSPA2P54652 639 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 MPNDQ8N594 471 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 PRAG1Q86YV5 1406 aa8.53□□□□□ -1.04
VPS36-202ENST00000462289 DIP2AQ14689 1571 aa8.52□□□□□ -1.04
VPS36-202ENST00000462289 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
VPS36-202ENST00000462289 BAP1Q92560 729 aa8.52□□□□□ -1.05
VPS36-202ENST00000462289 TRIM47Q96LD4 638 aa8.52□□□□□ -1.05
VPS36-202ENST00000462289 SENP2Q9HC62 589 aa8.52□□□□□ -1.05
VPS36-202ENST00000462289 CHD2O14647 1828 aaKnown RBP8.52□□□□□ -1.05
VPS36-202ENST00000462289 NWD1Q149M9 1564 aa8.52□□□□□ -1.05
VPS36-202ENST00000462289 LTKP29376 864 aa8.51□□□□□ -1.05
VPS36-202ENST00000462289 SLC24A3Q9HC58 644 aa8.51□□□□□ -1.05
VPS36-202ENST00000462289 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
VPS36-202ENST00000462289 PLEKHG1Q9ULL1 1385 aa8.5□□□□□ -1.05
VPS36-202ENST00000462289 CCDC144AA2RUR9 1427 aa8.5□□□□□ -1.05
VPS36-202ENST00000462289 NPHP4O75161 1426 aaPredicted RBP8.5□□□□□ -1.05
VPS36-202ENST00000462289 VARSP26640 1264 aaKnown RBP8.5□□□□□ -1.05
VPS36-202ENST00000462289 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
VPS36-202ENST00000462289 ADAMTS13Q76LX8 1427 aa8.5□□□□□ -1.05
VPS36-202ENST00000462289 RIMS2Q9UQ26 1411 aa8.5□□□□□ -1.05
VPS36-202ENST00000462289 MYOM2P54296 1465 aa8.5□□□□□ -1.05
VPS36-202ENST00000462289 XIRP1Q702N8 1843 aaKnown RBP8.5□□□□□ -1.05
VPS36-202ENST00000462289 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
VPS36-202ENST00000462289 TRIM52Q96A61 297 aa8.49□□□□□ -1.05
VPS36-202ENST00000462289 KIFC2Q96AC6 838 aa8.49□□□□□ -1.05
VPS36-202ENST00000462289 LIMD1Q9UGP4 676 aa8.49□□□□□ -1.05
VPS36-202ENST00000462289 WASF2Q9Y6W5 498 aa8.49□□□□□ -1.05
VPS36-202ENST00000462289 IQSEC2Q5JU85 1478 aa8.49□□□□□ -1.05
VPS36-202ENST00000462289 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
VPS36-202ENST00000462289 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
VPS36-202ENST00000462289 NFX1Q12986 1120 aaKnown RBP8.48□□□□□ -1.05
VPS36-202ENST00000462289 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
VPS36-202ENST00000462289 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
VPS36-202ENST00000462289 RPGRIP1LQ68CZ1 1315 aa8.48□□□□□ -1.05
VPS36-202ENST00000462289 LILRB3O75022 631 aa8.47□□□□□ -1.05
VPS36-202ENST00000462289 MAP10Q9P2G4 905 aa8.47□□□□□ -1.05
VPS36-202ENST00000462289 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms