RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 POLD1P28340 1107 aa17.82■□□□□ 0.44
C9orf3-210ENST00000462125 AK7Q96M32 723 aa17.82■□□□□ 0.44
C9orf3-210ENST00000462125 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
C9orf3-210ENST00000462125 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-210ENST00000462125 TAF1LQ8IZX4 1826 aa17.82■□□□□ 0.44
C9orf3-210ENST00000462125 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
C9orf3-210ENST00000462125 C5P01031 1676 aa17.81■□□□□ 0.44
C9orf3-210ENST00000462125 MSH5O43196 834 aa17.81■□□□□ 0.44
C9orf3-210ENST00000462125 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
C9orf3-210ENST00000462125 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
C9orf3-210ENST00000462125 TUBGCP6Q96RT7 1819 aa17.81■□□□□ 0.44
C9orf3-210ENST00000462125 DCAF8L1A6NGE4 600 aa17.8■□□□□ 0.44
C9orf3-210ENST00000462125 SSFA2P28290 1259 aa17.8■□□□□ 0.44
C9orf3-210ENST00000462125 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
C9orf3-210ENST00000462125 LGR6Q9HBX8 967 aa17.8■□□□□ 0.44
C9orf3-210ENST00000462125 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
C9orf3-210ENST00000462125 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
C9orf3-210ENST00000462125 RNMTO43148 476 aaKnown RBP17.78■□□□□ 0.44
C9orf3-210ENST00000462125 RC3H1Q5TC82 1133 aaKnown RBP17.78■□□□□ 0.44
C9orf3-210ENST00000462125 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
C9orf3-210ENST00000462125 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
C9orf3-210ENST00000462125 U2SURPO15042 1029 aaKnown RBP17.77■□□□□ 0.44
C9orf3-210ENST00000462125 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
C9orf3-210ENST00000462125 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.44
C9orf3-210ENST00000462125 ZNF831Q5JPB2 1677 aa17.75■□□□□ 0.43
C9orf3-210ENST00000462125 GNPATO15228 680 aa17.75■□□□□ 0.43
C9orf3-210ENST00000462125 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
C9orf3-210ENST00000462125 CNTNAP4Q9C0A0 1308 aa17.74■□□□□ 0.43
C9orf3-210ENST00000462125 PTCD1O75127 700 aaKnown RBP17.74■□□□□ 0.43
C9orf3-210ENST00000462125 PHF14O94880 888 aa17.74■□□□□ 0.43
C9orf3-210ENST00000462125 MSL1Q68DK7 614 aa17.74■□□□□ 0.43
C9orf3-210ENST00000462125 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
C9orf3-210ENST00000462125 TRAPPC3LQ5T215 181 aa17.73■□□□□ 0.43
C9orf3-210ENST00000462125 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
C9orf3-210ENST00000462125 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
C9orf3-210ENST00000462125 RTCBQ9Y3I0 505 aaKnown RBP17.73■□□□□ 0.43
C9orf3-210ENST00000462125 SCN11AQ9UI33 1791 aa17.73■□□□□ 0.43
C9orf3-210ENST00000462125 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
C9orf3-210ENST00000462125 ADRA2BP18089 450 aa17.72■□□□□ 0.43
C9orf3-210ENST00000462125 IL17REQ8NFR9 667 aa17.72■□□□□ 0.43
C9orf3-210ENST00000462125 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
C9orf3-210ENST00000462125 FCHSD2O94868 740 aa17.71■□□□□ 0.43
C9orf3-210ENST00000462125 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
C9orf3-210ENST00000462125 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
C9orf3-210ENST00000462125 UTRNP46939 3433 aa17.71■□□□□ 0.43
C9orf3-210ENST00000462125 MRC1P22897 1456 aa17.7■□□□□ 0.42
C9orf3-210ENST00000462125 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
C9orf3-210ENST00000462125 CD2APQ9Y5K6 639 aa17.7■□□□□ 0.42
C9orf3-210ENST00000462125 ADAMTS7Q9UKP4 1686 aa17.7■□□□□ 0.42
C9orf3-210ENST00000462125 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-210ENST00000462125 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
C9orf3-210ENST00000462125 SLC39A6Q13433 755 aa17.69■□□□□ 0.42
C9orf3-210ENST00000462125 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
C9orf3-210ENST00000462125 NLGN2Q8NFZ4 835 aa17.69■□□□□ 0.42
C9orf3-210ENST00000462125 CRKLP46109 303 aaKnown RBP17.68■□□□□ 0.42
C9orf3-210ENST00000462125 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
C9orf3-210ENST00000462125 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
C9orf3-210ENST00000462125 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
C9orf3-210ENST00000462125 SENP3-EIF4A1A0A087X0R7 540 aa17.66■□□□□ 0.42
C9orf3-210ENST00000462125 RFC4P35249 363 aa17.66■□□□□ 0.42
C9orf3-210ENST00000462125 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
C9orf3-210ENST00000462125 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-210ENST00000462125 CEMIPQ8WUJ3 1361 aa17.66■□□□□ 0.42
C9orf3-210ENST00000462125 CYP19A1P11511 503 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-210ENST00000462125 GYS1P13807 737 aa17.65■□□□□ 0.42
C9orf3-210ENST00000462125 TEFQ10587 303 aa17.65■□□□□ 0.42
C9orf3-210ENST00000462125 GPR162Q16538 588 aa17.65■□□□□ 0.42
C9orf3-210ENST00000462125 MYH14Q7Z406 1995 aaKnown RBP17.65■□□□□ 0.42
C9orf3-210ENST00000462125 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-210ENST00000462125 MMP10P09238 476 aa17.63■□□□□ 0.41
C9orf3-210ENST00000462125 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
C9orf3-210ENST00000462125 RALBP1Q15311 655 aa17.63■□□□□ 0.41
C9orf3-210ENST00000462125 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
C9orf3-210ENST00000462125 ZNF784Q8NCA9 323 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-210ENST00000462125 CCDC87Q9NVE4 849 aa17.63■□□□□ 0.41
C9orf3-210ENST00000462125 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
C9orf3-210ENST00000462125 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
C9orf3-210ENST00000462125 TJP1Q07157 1748 aa17.61■□□□□ 0.41
C9orf3-210ENST00000462125 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
C9orf3-210ENST00000462125 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-210ENST00000462125 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
C9orf3-210ENST00000462125 GRIN3BO60391 1043 aa17.6■□□□□ 0.41
C9orf3-210ENST00000462125 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
C9orf3-210ENST00000462125 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
C9orf3-210ENST00000462125 TEX13AQ9BXU3 409 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-210ENST00000462125 SOS1Q07889 1333 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-210ENST00000462125 USP42Q9H9J4 1324 aaKnown RBP17.6■□□□□ 0.41
C9orf3-210ENST00000462125 VIRMAQ69YN4 1812 aaKnown RBP17.6■□□□□ 0.41
C9orf3-210ENST00000462125 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
C9orf3-210ENST00000462125 YBX3P16989 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
C9orf3-210ENST00000462125 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
C9orf3-210ENST00000462125 SRP68Q9UHB9 627 aaKnown RBP17.59■□□□□ 0.41
C9orf3-210ENST00000462125 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
C9orf3-210ENST00000462125 STARD3NLO95772 234 aa17.58■□□□□ 0.4
C9orf3-210ENST00000462125 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
C9orf3-210ENST00000462125 TM4SF1P30408 202 aa17.57■□□□□ 0.4
C9orf3-210ENST00000462125 FKBP8Q14318 412 aa17.57■□□□□ 0.4
C9orf3-210ENST00000462125 MCM10Q7L590 875 aa17.57■□□□□ 0.4
C9orf3-210ENST00000462125 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
C9orf3-210ENST00000462125 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms