RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 CXorf56Q9H5V9 222 aa11□□□□□ -0.65
LINC01140-201ENST00000461990 TTC31Q49AM3 519 aaPredicted RBP10.99□□□□□ -0.65
LINC01140-201ENST00000461990 NYAP1Q6ZVC0 841 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 CCDC191Q8NCU4 936 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 NEK11Q8NG66 645 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 CHAMP1Q96JM3 812 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
LINC01140-201ENST00000461990 TCHHQ07283 1943 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 PTGS1P23219 599 aa10.99□□□□□ -0.65
LINC01140-201ENST00000461990 NUP155O75694 1391 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 MCM2P49736 904 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 ELF2Q15723 593 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 ATF7IPQ6VMQ6 1270 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
LINC01140-201ENST00000461990 SLU7O95391 586 aaKnown RBP10.98□□□□□ -0.65
LINC01140-201ENST00000461990 SRPK2P78362 688 aaKnown RBP10.98□□□□□ -0.65
LINC01140-201ENST00000461990 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 DISP1Q96F81 1524 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 ELP1O95163 1332 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 KIF13AQ9H1H9 1805 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 RPAP1Q9BWH6 1393 aaPredicted RBP10.98□□□□□ -0.65
LINC01140-201ENST00000461990 CPP00450 1065 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 CEP89Q96ST8 783 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 DEF6Q9H4E7 631 aa10.98□□□□□ -0.65
LINC01140-201ENST00000461990 ZNF644Q9H582 1327 aaPredicted RBP10.97□□□□□ -0.65
LINC01140-201ENST00000461990 CARMIL2Q6F5E8 1435 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 KIAA0556O60303 1618 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 USP48Q86UV5 1035 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 CDC42BPAQ5VT25 1732 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 CCDC189A1A4V9 331 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 TRDNQ13061 729 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 SMARCE1Q969G3 411 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 IFT57Q9NWB7 429 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
LINC01140-201ENST00000461990 ITPRIPQ8IWB1 547 aa10.96□□□□□ -0.65
LINC01140-201ENST00000461990 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC01140-201ENST00000461990 GTF3C6Q969F1 213 aa10.96□□□□□ -0.65
LINC01140-201ENST00000461990 L2HGDHQ9H9P8 463 aa10.96□□□□□ -0.65
LINC01140-201ENST00000461990 RPS6KA5O75582 802 aa10.96□□□□□ -0.66
LINC01140-201ENST00000461990 UBE2HP62256 183 aa10.96□□□□□ -0.66
LINC01140-201ENST00000461990 TPD52L1Q16890 204 aaPredicted RBP10.96□□□□□ -0.66
LINC01140-201ENST00000461990 MCTP2Q6DN12 878 aa10.96□□□□□ -0.66
LINC01140-201ENST00000461990 EXOC4Q96A65 974 aa10.96□□□□□ -0.66
LINC01140-201ENST00000461990 SUFUQ9UMX1 484 aa10.96□□□□□ -0.66
LINC01140-201ENST00000461990 ABCC11Q96J66 1382 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 KIF2AO00139 706 aaPredicted RBP10.95□□□□□ -0.66
LINC01140-201ENST00000461990 CLCN6P51797 869 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 GPATCH11Q8N954 259 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 SPC24Q8NBT2 197 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
LINC01140-201ENST00000461990 DRC1Q96MC2 740 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 IVLP07476 585 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
LINC01140-201ENST00000461990 NEMFO60524 1076 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 GSPT1P15170 499 aaKnown RBP10.94□□□□□ -0.66
LINC01140-201ENST00000461990 CDC25BP30305 580 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 CCDC186Q7Z3E2 898 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 PPM1EQ8WY54 764 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 CCDC196A0A1B0GTZ2 297 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 ST5P78524 1137 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 INTS3Q68E01 1043 aaKnown RBP10.94□□□□□ -0.66
LINC01140-201ENST00000461990 AK7Q96M32 723 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 MADDQ8WXG6 1647 aa10.94□□□□□ -0.66
LINC01140-201ENST00000461990 SMARCA5O60264 1052 aaPredicted RBP10.93□□□□□ -0.66
LINC01140-201ENST00000461990 REXO1L1PQ8IX06 675 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 TMEM57Q8N5G2 664 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 TMX3Q96JJ7 454 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 TOMM22Q9NS69 142 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
LINC01140-201ENST00000461990 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 WDR33Q9C0J8 1336 aaKnown RBP10.93□□□□□ -0.66
LINC01140-201ENST00000461990 TCP11L2Q8N4U5 519 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 FAM200AQ8TCP9 573 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 IL17RAQ96F46 866 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 PLA2R1Q13018 1463 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 ACTN2P35609 894 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 ATP6V1AP38606 617 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 MAP2K1Q02750 393 aaPredicted RBP10.93□□□□□ -0.66
LINC01140-201ENST00000461990 LRMPQ12912 555 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 TTC37Q6PGP7 1564 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 PIK3R4Q99570 1358 aa10.93□□□□□ -0.66
LINC01140-201ENST00000461990 ZNF853P0CG23 659 aa10.92□□□□□ -0.66
LINC01140-201ENST00000461990 TDO2P48775 406 aa10.92□□□□□ -0.66
LINC01140-201ENST00000461990 PTPN14Q15678 1187 aa10.92□□□□□ -0.66
LINC01140-201ENST00000461990 ANKRD45Q5TZF3 282 aa10.92□□□□□ -0.66
LINC01140-201ENST00000461990 MMS22LQ6ZRQ5 1243 aa10.92□□□□□ -0.66
LINC01140-201ENST00000461990 TACO1Q9BSH4 297 aaKnown RBP10.92□□□□□ -0.66
LINC01140-201ENST00000461990 KIF3CO14782 793 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 PPP1R12AO14974 1030 aaPredicted RBP10.91□□□□□ -0.66
LINC01140-201ENST00000461990 CCDC192P0DO97 292 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 TMED8Q6PL24 325 aaPredicted RBP10.91□□□□□ -0.66
LINC01140-201ENST00000461990 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
LINC01140-201ENST00000461990 USP32Q8NFA0 1604 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 UNC13BO14795 1591 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms