RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 CABP4P57796 275 aa13.53□□□□□ -0.24
SYN3-206ENST00000461446 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
SYN3-206ENST00000461446 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
SYN3-206ENST00000461446 MSH5O43196 834 aa13.52□□□□□ -0.25
SYN3-206ENST00000461446 FCHSD2O94868 740 aa13.52□□□□□ -0.25
SYN3-206ENST00000461446 ITPK1Q13572 414 aa13.52□□□□□ -0.25
SYN3-206ENST00000461446 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
SYN3-206ENST00000461446 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
SYN3-206ENST00000461446 C5P01031 1676 aa13.51□□□□□ -0.25
SYN3-206ENST00000461446 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
SYN3-206ENST00000461446 NFATC2IPQ8NCF5 419 aa13.51□□□□□ -0.25
SYN3-206ENST00000461446 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
SYN3-206ENST00000461446 TAF1LQ8IZX4 1826 aa13.5□□□□□ -0.25
SYN3-206ENST00000461446 ATP6V1AP38606 617 aa13.5□□□□□ -0.25
SYN3-206ENST00000461446 SLC4A9Q96Q91 983 aa13.5□□□□□ -0.25
SYN3-206ENST00000461446 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
SYN3-206ENST00000461446 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
SYN3-206ENST00000461446 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
SYN3-206ENST00000461446 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
SYN3-206ENST00000461446 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYN3-206ENST00000461446 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 AK7Q96M32 723 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 ARXQ96QS3 562 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
SYN3-206ENST00000461446 C4BP0C0L5 1744 aa13.49□□□□□ -0.25
SYN3-206ENST00000461446 PHF14O94880 888 aa13.48□□□□□ -0.25
SYN3-206ENST00000461446 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
SYN3-206ENST00000461446 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
SYN3-206ENST00000461446 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
SYN3-206ENST00000461446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
SYN3-206ENST00000461446 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
SYN3-206ENST00000461446 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
SYN3-206ENST00000461446 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
SYN3-206ENST00000461446 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
SYN3-206ENST00000461446 ADAMTS8Q9UP79 889 aa13.47□□□□□ -0.25
SYN3-206ENST00000461446 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
SYN3-206ENST00000461446 GNPATO15228 680 aa13.46□□□□□ -0.25
SYN3-206ENST00000461446 MIER1Q8N108 512 aa13.46□□□□□ -0.25
SYN3-206ENST00000461446 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
SYN3-206ENST00000461446 SCN11AQ9UI33 1791 aa13.45□□□□□ -0.26
SYN3-206ENST00000461446 HMGB2P26583 209 aaKnown RBP13.45□□□□□ -0.26
SYN3-206ENST00000461446 POLD1P28340 1107 aa13.45□□□□□ -0.26
SYN3-206ENST00000461446 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
SYN3-206ENST00000461446 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
SYN3-206ENST00000461446 NEFMP07197 916 aa13.44□□□□□ -0.26
SYN3-206ENST00000461446 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
SYN3-206ENST00000461446 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
SYN3-206ENST00000461446 UBR3Q6ZT12 1888 aa13.44□□□□□ -0.26
SYN3-206ENST00000461446 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
SYN3-206ENST00000461446 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
SYN3-206ENST00000461446 SSFA2P28290 1259 aa13.42□□□□□ -0.26
SYN3-206ENST00000461446 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
SYN3-206ENST00000461446 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
SYN3-206ENST00000461446 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
SYN3-206ENST00000461446 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
SYN3-206ENST00000461446 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
SYN3-206ENST00000461446 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
SYN3-206ENST00000461446 MRC1P22897 1456 aa13.41□□□□□ -0.26
SYN3-206ENST00000461446 VIRMAQ69YN4 1812 aaKnown RBP13.41□□□□□ -0.26
SYN3-206ENST00000461446 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
SYN3-206ENST00000461446 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
SYN3-206ENST00000461446 NFE2L2Q16236 605 aa13.4□□□□□ -0.26
SYN3-206ENST00000461446 RC3H1Q5TC82 1133 aaKnown RBP13.4□□□□□ -0.26
SYN3-206ENST00000461446 DNAJC10Q8IXB1 793 aa13.4□□□□□ -0.26
SYN3-206ENST00000461446 FAM9BQ8IZU0 186 aa13.4□□□□□ -0.26
SYN3-206ENST00000461446 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
SYN3-206ENST00000461446 MYH14Q7Z406 1995 aaKnown RBP13.4□□□□□ -0.27
SYN3-206ENST00000461446 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
SYN3-206ENST00000461446 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
SYN3-206ENST00000461446 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
SYN3-206ENST00000461446 ZNF831Q5JPB2 1677 aa13.39□□□□□ -0.27
SYN3-206ENST00000461446 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
SYN3-206ENST00000461446 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
SYN3-206ENST00000461446 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
SYN3-206ENST00000461446 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
SYN3-206ENST00000461446 TMPOP42166 694 aaKnown RBP13.38□□□□□ -0.27
SYN3-206ENST00000461446 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
SYN3-206ENST00000461446 TJP1Q07157 1748 aa13.38□□□□□ -0.27
SYN3-206ENST00000461446 APAF1O14727 1248 aa13.37□□□□□ -0.27
SYN3-206ENST00000461446 TEFQ10587 303 aa13.37□□□□□ -0.27
SYN3-206ENST00000461446 KCPQ6ZWJ8 1503 aa13.37□□□□□ -0.27
SYN3-206ENST00000461446 KCNQ3O43525 872 aa13.36□□□□□ -0.27
SYN3-206ENST00000461446 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
SYN3-206ENST00000461446 RFC4P35249 363 aa13.36□□□□□ -0.27
SYN3-206ENST00000461446 RIPK4P57078 832 aa13.36□□□□□ -0.27
SYN3-206ENST00000461446 DCTN1Q14203 1278 aa13.36□□□□□ -0.27
SYN3-206ENST00000461446 MCM10Q7L590 875 aa13.36□□□□□ -0.27
SYN3-206ENST00000461446 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
SYN3-206ENST00000461446 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
SYN3-206ENST00000461446 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
SYN3-206ENST00000461446 MMP10P09238 476 aa13.35□□□□□ -0.27
SYN3-206ENST00000461446 ADRA2BP18089 450 aa13.35□□□□□ -0.27
SYN3-206ENST00000461446 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
SYN3-206ENST00000461446 TTC5Q8N0Z6 440 aa13.35□□□□□ -0.27
SYN3-206ENST00000461446 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
SYN3-206ENST00000461446 CCDC87Q9NVE4 849 aa13.35□□□□□ -0.27
SYN3-206ENST00000461446 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms