RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
VARS-219ENST00000461328 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
VARS-219ENST00000461328 ATP6V1AP38606 617 aa20.68■□□□□ 0.9
VARS-219ENST00000461328 FLAD1Q8NFF5 587 aa20.68■□□□□ 0.9
VARS-219ENST00000461328 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
VARS-219ENST00000461328 ITPK1Q13572 414 aa20.66■□□□□ 0.9
VARS-219ENST00000461328 AKAP4Q5JQC9 854 aa20.66■□□□□ 0.9
VARS-219ENST00000461328 LINC00116Q8NCU8 138 aa20.66■□□□□ 0.9
VARS-219ENST00000461328 SYT17Q9BSW7 474 aa20.66■□□□□ 0.9
VARS-219ENST00000461328 PHF14O94880 888 aa20.65■□□□□ 0.9
VARS-219ENST00000461328 KLHL34Q8N239 644 aa20.65■□□□□ 0.9
VARS-219ENST00000461328 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
VARS-219ENST00000461328 DDX10Q13206 875 aaKnown RBP20.64■□□□□ 0.89
VARS-219ENST00000461328 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
VARS-219ENST00000461328 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
VARS-219ENST00000461328 COL24A1Q17RW2 1714 aa20.63■□□□□ 0.89
VARS-219ENST00000461328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.62■□□□□ 0.89
VARS-219ENST00000461328 GNPATO15228 680 aa20.62■□□□□ 0.89
VARS-219ENST00000461328 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
VARS-219ENST00000461328 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
VARS-219ENST00000461328 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
VARS-219ENST00000461328 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
VARS-219ENST00000461328 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
VARS-219ENST00000461328 SSFA2P28290 1259 aa20.61■□□□□ 0.89
VARS-219ENST00000461328 SMIM5Q71RC9 77 aa20.61■□□□□ 0.89
VARS-219ENST00000461328 UBR3Q6ZT12 1888 aa20.6■□□□□ 0.89
VARS-219ENST00000461328 SLC4A9Q96Q91 983 aa20.6■□□□□ 0.89
VARS-219ENST00000461328 ZNF831Q5JPB2 1677 aa20.59■□□□□ 0.89
VARS-219ENST00000461328 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
VARS-219ENST00000461328 PTCD1O75127 700 aaKnown RBP20.59■□□□□ 0.89
VARS-219ENST00000461328 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
VARS-219ENST00000461328 LGR6Q9HBX8 967 aa20.59■□□□□ 0.89
VARS-219ENST00000461328 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
VARS-219ENST00000461328 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.88
VARS-219ENST00000461328 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
VARS-219ENST00000461328 GAS2L2Q8NHY3 880 aa20.56■□□□□ 0.88
VARS-219ENST00000461328 MRC1P22897 1456 aa20.56■□□□□ 0.88
VARS-219ENST00000461328 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
VARS-219ENST00000461328 COL5A3P25940 1745 aaPredicted RBP20.55■□□□□ 0.88
VARS-219ENST00000461328 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
VARS-219ENST00000461328 RALBP1Q15311 655 aa20.54■□□□□ 0.88
VARS-219ENST00000461328 RC3H1Q5TC82 1133 aaKnown RBP20.54■□□□□ 0.88
VARS-219ENST00000461328 TRAPPC3LQ5T215 181 aa20.53■□□□□ 0.88
VARS-219ENST00000461328 RSPH6AQ9H0K4 717 aa20.53■□□□□ 0.88
VARS-219ENST00000461328 ADAMTS7Q9UKP4 1686 aa20.53■□□□□ 0.88
VARS-219ENST00000461328 GNAT3A8MTJ3 354 aa20.52■□□□□ 0.88
VARS-219ENST00000461328 YY1P25490 414 aa20.52■□□□□ 0.88
VARS-219ENST00000461328 SLC39A6Q13433 755 aa20.52■□□□□ 0.88
VARS-219ENST00000461328 NLGN2Q8NFZ4 835 aa20.52■□□□□ 0.88
VARS-219ENST00000461328 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
VARS-219ENST00000461328 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
VARS-219ENST00000461328 ADRA2BP18089 450 aa20.51■□□□□ 0.87
VARS-219ENST00000461328 CRKLP46109 303 aaKnown RBP20.5■□□□□ 0.87
VARS-219ENST00000461328 GPR162Q16538 588 aa20.5■□□□□ 0.87
VARS-219ENST00000461328 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
VARS-219ENST00000461328 PHACTR3Q96KR7 559 aa20.5■□□□□ 0.87
VARS-219ENST00000461328 TJP1Q07157 1748 aa20.5■□□□□ 0.87
VARS-219ENST00000461328 RFC4P35249 363 aa20.49■□□□□ 0.87
VARS-219ENST00000461328 TEFQ10587 303 aa20.49■□□□□ 0.87
VARS-219ENST00000461328 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
VARS-219ENST00000461328 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
VARS-219ENST00000461328 NEFMP07197 916 aa20.48■□□□□ 0.87
VARS-219ENST00000461328 DNAJC10Q8IXB1 793 aa20.48■□□□□ 0.87
VARS-219ENST00000461328 CD2APQ9Y5K6 639 aa20.48■□□□□ 0.87
VARS-219ENST00000461328 FCHSD2O94868 740 aa20.47■□□□□ 0.87
VARS-219ENST00000461328 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
VARS-219ENST00000461328 IL17REQ8NFR9 667 aa20.47■□□□□ 0.87
VARS-219ENST00000461328 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
VARS-219ENST00000461328 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
VARS-219ENST00000461328 MMP10P09238 476 aa20.46■□□□□ 0.87
VARS-219ENST00000461328 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
VARS-219ENST00000461328 NLGN1Q8N2Q7 840 aa20.45■□□□□ 0.86
VARS-219ENST00000461328 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
VARS-219ENST00000461328 CCDC87Q9NVE4 849 aa20.44■□□□□ 0.86
VARS-219ENST00000461328 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
VARS-219ENST00000461328 GYS1P13807 737 aa20.43■□□□□ 0.86
VARS-219ENST00000461328 VSIG10Q8N0Z9 540 aa20.43■□□□□ 0.86
VARS-219ENST00000461328 C4AP0C0L4 1744 aa20.42■□□□□ 0.86
VARS-219ENST00000461328 UBR2Q8IWV8 1755 aa20.42■□□□□ 0.86
VARS-219ENST00000461328 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
VARS-219ENST00000461328 CEMIPQ8WUJ3 1361 aa20.42■□□□□ 0.86
VARS-219ENST00000461328 ZNF790Q6PG37 636 aa20.41■□□□□ 0.86
VARS-219ENST00000461328 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
VARS-219ENST00000461328 SIPA1L3O60292 1781 aaPredicted RBP20.4■□□□□ 0.86
VARS-219ENST00000461328 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
VARS-219ENST00000461328 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
VARS-219ENST00000461328 USP42Q9H9J4 1324 aaKnown RBP20.4■□□□□ 0.86
VARS-219ENST00000461328 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
VARS-219ENST00000461328 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
VARS-219ENST00000461328 SOS1Q07889 1333 aaPredicted RBP20.39■□□□□ 0.85
VARS-219ENST00000461328 STARD3NLO95772 234 aa20.39■□□□□ 0.85
VARS-219ENST00000461328 MCM10Q7L590 875 aa20.39■□□□□ 0.85
VARS-219ENST00000461328 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
VARS-219ENST00000461328 BTBD11A6QL63 1104 aa20.38■□□□□ 0.85
VARS-219ENST00000461328 YBX3P16989 372 aaKnown RBP eCLIP20.38■□□□□ 0.852e-8■□□□□ 10.1
VARS-219ENST00000461328 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
VARS-219ENST00000461328 ZBTB1Q9Y2K1 713 aa20.38■□□□□ 0.85
VARS-219ENST00000461328 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
VARS-219ENST00000461328 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
VARS-219ENST00000461328 ZPR1O75312 459 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms