RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
ECHDC1-212ENST00000461239 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
ECHDC1-212ENST00000461239 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
ECHDC1-212ENST00000461239 TLL1O43897 1013 aa12.03□□□□□ -0.48
ECHDC1-212ENST00000461239 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
ECHDC1-212ENST00000461239 DEPDC5O75140 1603 aa12.03□□□□□ -0.48
ECHDC1-212ENST00000461239 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
ECHDC1-212ENST00000461239 NAIPQ13075 1403 aa12.03□□□□□ -0.48
ECHDC1-212ENST00000461239 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
ECHDC1-212ENST00000461239 KDM5DQ9BY66 1539 aa12.02□□□□□ -0.48
ECHDC1-212ENST00000461239 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.49
ECHDC1-212ENST00000461239 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
ECHDC1-212ENST00000461239 OCSTAMPQ9BR26 566 aa12.02□□□□□ -0.49
ECHDC1-212ENST00000461239 C3P01024 1663 aa12.02□□□□□ -0.49
ECHDC1-212ENST00000461239 ABCC3O15438 1527 aa12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 ATP9BO43861 1147 aa12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 ZPR1O75312 459 aa12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 USTQ9Y2C2 406 aa12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
ECHDC1-212ENST00000461239 MROH2AA6NES4 1674 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 PIK3CDO00329 1044 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 ADH1BP00325 375 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 PDXDC2PQ6P474 469 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
ECHDC1-212ENST00000461239 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
ECHDC1-212ENST00000461239 GPSM3Q9Y4H4 160 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 HFM1A2PYH4 1435 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 FAM135AQ9P2D6 1515 aa12□□□□□ -0.49
ECHDC1-212ENST00000461239 PDE4CQ08493 712 aa11.99□□□□□ -0.49
ECHDC1-212ENST00000461239 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
ECHDC1-212ENST00000461239 ARMC2Q8NEN0 867 aa11.99□□□□□ -0.49
ECHDC1-212ENST00000461239 MTRQ99707 1265 aa11.99□□□□□ -0.49
ECHDC1-212ENST00000461239 UNC13BO14795 1591 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 LMTK2Q8IWU2 1503 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 PZPP20742 1482 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 ATG7O95352 703 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 CSB-PGBD3P0DP91 1061 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 CEP152O94986 1710 aa11.97□□□□□ -0.49
ECHDC1-212ENST00000461239 LMTK3Q96Q04 1460 aa11.96□□□□□ -0.49
ECHDC1-212ENST00000461239 PTK2Q05397 1052 aa11.96□□□□□ -0.49
ECHDC1-212ENST00000461239 CDCA8Q53HL2 280 aa11.96□□□□□ -0.49
ECHDC1-212ENST00000461239 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
ECHDC1-212ENST00000461239 GCC2Q8IWJ2 1684 aa11.96□□□□□ -0.5
ECHDC1-212ENST00000461239 NPATQ14207 1427 aa11.95□□□□□ -0.5
ECHDC1-212ENST00000461239 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
ECHDC1-212ENST00000461239 TJAP1Q5JTD0 557 aa11.95□□□□□ -0.5
ECHDC1-212ENST00000461239 FAM174AQ8TBP5 190 aa11.95□□□□□ -0.5
ECHDC1-212ENST00000461239 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
ECHDC1-212ENST00000461239 ARHGAP31Q2M1Z3 1444 aa11.94□□□□□ -0.5
ECHDC1-212ENST00000461239 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
ECHDC1-212ENST00000461239 PTCRAQ6ISU1 281 aaPredicted RBP11.94□□□□□ -0.5
ECHDC1-212ENST00000461239 UNC93B1Q9H1C4 597 aa11.94□□□□□ -0.5
ECHDC1-212ENST00000461239 NUP155O75694 1391 aa11.93□□□□□ -0.5
ECHDC1-212ENST00000461239 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
ECHDC1-212ENST00000461239 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
ECHDC1-212ENST00000461239 KANK1Q14678 1352 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 CEP126Q9P2H0 1117 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 IQGAP3Q86VI3 1631 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
ECHDC1-212ENST00000461239 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 SKIP12755 728 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 HSPA2P54652 639 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 PHTF2Q8N3S3 785 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 SLC6A16Q9GZN6 736 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 VRTNQ9H8Y1 702 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 SETD5Q9C0A6 1442 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 TNRQ92752 1358 aa11.91□□□□□ -0.5
ECHDC1-212ENST00000461239 PTPN5P54829 565 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 MCCD1P59942 119 aaPredicted RBP11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 ADAM32Q8TC27 787 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 ARHGAP9Q9BRR9 750 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 PREX1Q8TCU6 1659 aa11.9□□□□□ -0.5
ECHDC1-212ENST00000461239 NOS1P29475 1434 aa11.89□□□□□ -0.51
ECHDC1-212ENST00000461239 BRD1O95696 1058 aa11.89□□□□□ -0.51
ECHDC1-212ENST00000461239 ZNF592Q92610 1267 aa11.89□□□□□ -0.51
ECHDC1-212ENST00000461239 TET3O43151 1660 aa11.89□□□□□ -0.51
ECHDC1-212ENST00000461239 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
ECHDC1-212ENST00000461239 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
ECHDC1-212ENST00000461239 CFAP65Q6ZU64 1925 aaKnown RBP11.88□□□□□ -0.51
ECHDC1-212ENST00000461239 ELOAQ14241 798 aaKnown RBP11.88□□□□□ -0.51
ECHDC1-212ENST00000461239 SH3RF1Q7Z6J0 888 aa11.88□□□□□ -0.51
ECHDC1-212ENST00000461239 CCDC9Q9Y3X0 531 aaKnown RBP11.88□□□□□ -0.51
ECHDC1-212ENST00000461239 SYNMO15061 1565 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms