RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 NFATC2IPQ8NCF5 419 aa27.32■■□□□ 1.96
SCAF8-204ENST00000461219 ATG3Q9NT62 314 aa27.32■■□□□ 1.96
SCAF8-204ENST00000461219 C4BP0C0L5 1744 aa27.31■■□□□ 1.96
SCAF8-204ENST00000461219 ATP6V1AP38606 617 aa27.31■■□□□ 1.96
SCAF8-204ENST00000461219 AK7Q96M32 723 aa27.31■■□□□ 1.96
SCAF8-204ENST00000461219 PDGFDQ9GZP0 370 aaPredicted RBP27.31■■□□□ 1.96
SCAF8-204ENST00000461219 RSPH6AQ9H0K4 717 aa27.3■■□□□ 1.96
SCAF8-204ENST00000461219 RNMTO43148 476 aaKnown RBP27.29■■□□□ 1.96
SCAF8-204ENST00000461219 FCHSD2O94868 740 aa27.29■■□□□ 1.96
SCAF8-204ENST00000461219 ATF5Q9Y2D1 282 aaPredicted RBP27.29■■□□□ 1.96
SCAF8-204ENST00000461219 MYBBP1AQ9BQG0 1328 aaKnown RBP27.29■■□□□ 1.96
SCAF8-204ENST00000461219 MAP3K5Q99683 1374 aa27.29■■□□□ 1.96
SCAF8-204ENST00000461219 GNAT3A8MTJ3 354 aa27.28■■□□□ 1.96
SCAF8-204ENST00000461219 LGR6Q9HBX8 967 aa27.28■■□□□ 1.96
SCAF8-204ENST00000461219 SRCAPQ6ZRS2 3230 aa27.28■■□□□ 1.96
SCAF8-204ENST00000461219 ZNF316A6NFI3 1004 aaPredicted RBP27.27■■□□□ 1.96
SCAF8-204ENST00000461219 MTFR1LQ9H019 292 aa27.27■■□□□ 1.96
SCAF8-204ENST00000461219 SLC52A2Q9HAB3 445 aa27.27■■□□□ 1.96
SCAF8-204ENST00000461219 PNNQ9H307 717 aaKnown RBP27.26■■□□□ 1.95
SCAF8-204ENST00000461219 TEFQ10587 303 aa27.25■■□□□ 1.95
SCAF8-204ENST00000461219 PNPLA7Q6ZV29 1317 aa27.24■■□□□ 1.95
SCAF8-204ENST00000461219 PTCD1O75127 700 aaKnown RBP27.24■■□□□ 1.95
SCAF8-204ENST00000461219 PHACTR3Q96KR7 559 aa27.24■■□□□ 1.95
SCAF8-204ENST00000461219 ZNF831Q5JPB2 1677 aa27.24■■□□□ 1.95
SCAF8-204ENST00000461219 UBR3Q6ZT12 1888 aa27.23■■□□□ 1.95
SCAF8-204ENST00000461219 FLAD1Q8NFF5 587 aa27.23■■□□□ 1.95
SCAF8-204ENST00000461219 SLC16A10Q8TF71 515 aa27.23■■□□□ 1.95
SCAF8-204ENST00000461219 RTF1Q92541 710 aaKnown RBP27.23■■□□□ 1.95
SCAF8-204ENST00000461219 ADAMTS7Q9UKP4 1686 aa27.23■■□□□ 1.95
SCAF8-204ENST00000461219 MAPK8IP3Q9UPT6 1336 aa27.21■■□□□ 1.95
SCAF8-204ENST00000461219 MRC1P22897 1456 aa27.21■■□□□ 1.95
SCAF8-204ENST00000461219 LINC00116Q8NCU8 138 aa27.21■■□□□ 1.95
SCAF8-204ENST00000461219 DLG5Q8TDM6 1919 aa27.21■■□□□ 1.95
SCAF8-204ENST00000461219 PHF14O94880 888 aa27.2■■□□□ 1.94
SCAF8-204ENST00000461219 COL5A3P25940 1745 aaPredicted RBP27.2■■□□□ 1.94
SCAF8-204ENST00000461219 POLD1P28340 1107 aa27.19■■□□□ 1.94
SCAF8-204ENST00000461219 ITPK1Q13572 414 aa27.19■■□□□ 1.94
SCAF8-204ENST00000461219 TTC5Q8N0Z6 440 aa27.19■■□□□ 1.94
SCAF8-204ENST00000461219 GNPATO15228 680 aa27.18■■□□□ 1.94
SCAF8-204ENST00000461219 SIPA1L3O60292 1781 aaPredicted RBP27.17■■□□□ 1.94
SCAF8-204ENST00000461219 WDR43Q15061 677 aaKnown RBP eCLIP27.17■■□□□ 1.94
SCAF8-204ENST00000461219 COL23A1Q86Y22 540 aaPredicted RBP27.17■■□□□ 1.94
SCAF8-204ENST00000461219 PRKRIP1Q9H875 184 aaPredicted RBP27.17■■□□□ 1.94
SCAF8-204ENST00000461219 SLC39A6Q13433 755 aa27.16■■□□□ 1.94
SCAF8-204ENST00000461219 TJP1Q07157 1748 aa27.14■■□□□ 1.94
SCAF8-204ENST00000461219 IL17REQ8NFR9 667 aa27.14■■□□□ 1.94
SCAF8-204ENST00000461219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.13■■□□□ 1.93
SCAF8-204ENST00000461219 SSFA2P28290 1259 aa27.13■■□□□ 1.93
SCAF8-204ENST00000461219 PTGER2P43116 358 aa27.13■■□□□ 1.93
SCAF8-204ENST00000461219 RTCBQ9Y3I0 505 aaKnown RBP27.13■■□□□ 1.93
SCAF8-204ENST00000461219 UBR2Q8IWV8 1755 aa27.12■■□□□ 1.93
SCAF8-204ENST00000461219 SLC4A9Q96Q91 983 aa27.12■■□□□ 1.93
SCAF8-204ENST00000461219 MSL1Q68DK7 614 aa27.11■■□□□ 1.93
SCAF8-204ENST00000461219 KLHL34Q8N239 644 aa27.11■■□□□ 1.93
SCAF8-204ENST00000461219 ARXQ96QS3 562 aa27.11■■□□□ 1.93
SCAF8-204ENST00000461219 MYH14Q7Z406 1995 aaKnown RBP27.11■■□□□ 1.93
SCAF8-204ENST00000461219 MCM10Q7L590 875 aa27.1■■□□□ 1.93
SCAF8-204ENST00000461219 CNTNAP4Q9C0A0 1308 aa27.1■■□□□ 1.93
SCAF8-204ENST00000461219 CICQ96RK0 1608 aaPredicted RBP27.09■■□□□ 1.93
SCAF8-204ENST00000461219 DCAF8L1A6NGE4 600 aa27.09■■□□□ 1.93
SCAF8-204ENST00000461219 BTBD11A6QL63 1104 aa27.09■■□□□ 1.93
SCAF8-204ENST00000461219 HTATSF1O43719 755 aaKnown RBP27.09■■□□□ 1.93
SCAF8-204ENST00000461219 TRAPPC3LQ5T215 181 aa27.09■■□□□ 1.93
SCAF8-204ENST00000461219 RC3H1Q5TC82 1133 aaKnown RBP27.09■■□□□ 1.93
SCAF8-204ENST00000461219 COL24A1Q17RW2 1714 aa27.09■■□□□ 1.93
SCAF8-204ENST00000461219 CEMIPQ8WUJ3 1361 aa27.08■■□□□ 1.93
SCAF8-204ENST00000461219 KCPQ6ZWJ8 1503 aa27.07■■□□□ 1.92
SCAF8-204ENST00000461219 CRKLP46109 303 aaKnown RBP27.07■■□□□ 1.92
SCAF8-204ENST00000461219 NFE2L2Q16236 605 aa27.07■■□□□ 1.92
SCAF8-204ENST00000461219 SMIM5Q71RC9 77 aa27.07■■□□□ 1.92
SCAF8-204ENST00000461219 PLEKHF1Q96S99 279 aa27.07■■□□□ 1.92
SCAF8-204ENST00000461219 ANP32CO43423 234 aa27.06■■□□□ 1.92
SCAF8-204ENST00000461219 DCTN1Q14203 1278 aa27.06■■□□□ 1.92
SCAF8-204ENST00000461219 ZNF790Q6PG37 636 aa27.06■■□□□ 1.92
SCAF8-204ENST00000461219 DNAJC10Q8IXB1 793 aa27.06■■□□□ 1.92
SCAF8-204ENST00000461219 SGIP1Q9BQI5 828 aa27.05■■□□□ 1.92
SCAF8-204ENST00000461219 RPS6KA4O75676 772 aa27.04■■□□□ 1.92
SCAF8-204ENST00000461219 ADRA2BP18089 450 aa27.04■■□□□ 1.92
SCAF8-204ENST00000461219 RFC4P35249 363 aa27.04■■□□□ 1.92
SCAF8-204ENST00000461219 AMIGO3Q86WK7 504 aa27.04■■□□□ 1.92
SCAF8-204ENST00000461219 VSIG10Q8N0Z9 540 aa27.04■■□□□ 1.92
SCAF8-204ENST00000461219 FMNL2Q96PY5 1086 aa27.04■■□□□ 1.92
SCAF8-204ENST00000461219 FHDC1Q9C0D6 1143 aaPredicted RBP27.04■■□□□ 1.92
SCAF8-204ENST00000461219 C4AP0C0L4 1744 aa27.03■■□□□ 1.92
SCAF8-204ENST00000461219 CCDC146Q8IYE0 955 aa27.03■■□□□ 1.92
SCAF8-204ENST00000461219 CCDC87Q9NVE4 849 aa27.02■■□□□ 1.92
SCAF8-204ENST00000461219 STARD3NLO95772 234 aa27.01■■□□□ 1.91
SCAF8-204ENST00000461219 HEG1Q9ULI3 1381 aa27■■□□□ 1.91
SCAF8-204ENST00000461219 RIPK4P57078 832 aa27■■□□□ 1.91
SCAF8-204ENST00000461219 ZNF496Q96IT1 587 aaPredicted RBP27■■□□□ 1.91
SCAF8-204ENST00000461219 TEX13AQ9BXU3 409 aaPredicted RBP27■■□□□ 1.91
SCAF8-204ENST00000461219 LMOD3Q0VAK6 560 aa26.99■■□□□ 1.91
SCAF8-204ENST00000461219 TAF7Q15545 349 aaPredicted RBP26.99■■□□□ 1.91
SCAF8-204ENST00000461219 ARHGEF1Q92888 912 aaKnown RBP26.99■■□□□ 1.91
SCAF8-204ENST00000461219 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
SCAF8-204ENST00000461219 NPM2Q86SE8 214 aaKnown RBP26.98■■□□□ 1.91
SCAF8-204ENST00000461219 RUNDC1Q96C34 613 aa26.98■■□□□ 1.91
SCAF8-204ENST00000461219 SYT17Q9BSW7 474 aa26.98■■□□□ 1.91
SCAF8-204ENST00000461219 CYP19A1P11511 503 aaPredicted RBP26.97■■□□□ 1.91
SCAF8-204ENST00000461219 PNISRQ8TF01 805 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms