RNA–Protein interactions for RNA: ENST00000461065.1

AGAP3-203, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-203ENST00000461065 PLCH1Q4KWH8 1693 aa20.13■□□□□ 0.81
AGAP3-203ENST00000461065 CEMIPQ8WUJ3 1361 aa20.12■□□□□ 0.81
AGAP3-203ENST00000461065 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
AGAP3-203ENST00000461065 UNC5CLQ8IV45 518 aa20.12■□□□□ 0.81
AGAP3-203ENST00000461065 THRAP3Q9Y2W1 955 aaKnown RBP20.12■□□□□ 0.81
AGAP3-203ENST00000461065 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
AGAP3-203ENST00000461065 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
AGAP3-203ENST00000461065 TEFQ10587 303 aa20.11■□□□□ 0.81
AGAP3-203ENST00000461065 TAF7Q15545 349 aaPredicted RBP20.11■□□□□ 0.81
AGAP3-203ENST00000461065 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
AGAP3-203ENST00000461065 BABAM1Q9NWV8 329 aa20.11■□□□□ 0.81
AGAP3-203ENST00000461065 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
AGAP3-203ENST00000461065 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
AGAP3-203ENST00000461065 RWDD1Q9H446 243 aaPredicted RBP20.1■□□□□ 0.81
AGAP3-203ENST00000461065 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
AGAP3-203ENST00000461065 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
AGAP3-203ENST00000461065 CCDC9Q9Y3X0 531 aaKnown RBP20.1■□□□□ 0.81
AGAP3-203ENST00000461065 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
AGAP3-203ENST00000461065 LRP6O75581 1613 aa20.09■□□□□ 0.81
AGAP3-203ENST00000461065 CYP27B1O15528 508 aa20.09■□□□□ 0.81
AGAP3-203ENST00000461065 RTL5Q5HYW3 569 aaPredicted RBP20.09■□□□□ 0.81
AGAP3-203ENST00000461065 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
AGAP3-203ENST00000461065 CDCA7Q9BWT1 371 aaPredicted RBP20.09■□□□□ 0.81
AGAP3-203ENST00000461065 PARP4Q9UKK3 1724 aaKnown RBP20.09■□□□□ 0.81
AGAP3-203ENST00000461065 NWD2Q9ULI1 1742 aa20.09■□□□□ 0.81
AGAP3-203ENST00000461065 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.81
AGAP3-203ENST00000461065 DCAF5Q96JK2 942 aa20.08■□□□□ 0.81
AGAP3-203ENST00000461065 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.8
AGAP3-203ENST00000461065 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.8
AGAP3-203ENST00000461065 NBR1Q14596 966 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 DDX19BQ9UMR2 479 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 PCDHB15Q9Y5E8 787 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
AGAP3-203ENST00000461065 ATF7IPQ6VMQ6 1270 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 USP21Q9UK80 565 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 PKD1L3Q7Z443 1732 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 NRAPQ86VF7 1730 aa20.07■□□□□ 0.8
AGAP3-203ENST00000461065 BCL9LQ86UU0 1499 aa20.06■□□□□ 0.8
AGAP3-203ENST00000461065 VPS72Q15906 364 aa20.06■□□□□ 0.8
AGAP3-203ENST00000461065 DDX54Q8TDD1 881 aaKnown RBP20.06■□□□□ 0.8
AGAP3-203ENST00000461065 LRRC37A3O60309 1634 aa20.06■□□□□ 0.8
AGAP3-203ENST00000461065 TRIM27P14373 513 aa20.05■□□□□ 0.8
AGAP3-203ENST00000461065 DISP2A7MBM2 1401 aa20.05■□□□□ 0.8
AGAP3-203ENST00000461065 EXOC5O00471 708 aa20.05■□□□□ 0.8
AGAP3-203ENST00000461065 TWISTNBQ3B726 338 aaPredicted RBP20.05■□□□□ 0.8
AGAP3-203ENST00000461065 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
AGAP3-203ENST00000461065 BTBD11A6QL63 1104 aa20.04■□□□□ 0.8
AGAP3-203ENST00000461065 BARGINQ6ZT62 677 aa20.04■□□□□ 0.8
AGAP3-203ENST00000461065 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
AGAP3-203ENST00000461065 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
AGAP3-203ENST00000461065 NKX1-1Q15270 411 aaPredicted RBP20.03■□□□□ 0.8
AGAP3-203ENST00000461065 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
AGAP3-203ENST00000461065 VAMP4O75379 141 aa20.02■□□□□ 0.8
AGAP3-203ENST00000461065 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
AGAP3-203ENST00000461065 TSPYL6Q8N831 410 aa20.02■□□□□ 0.8
AGAP3-203ENST00000461065 SLC52A2Q9HAB3 445 aa20.02■□□□□ 0.8
AGAP3-203ENST00000461065 NOB1Q9ULX3 412 aaKnown RBP20.02■□□□□ 0.79
AGAP3-203ENST00000461065 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
AGAP3-203ENST00000461065 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
AGAP3-203ENST00000461065 CABP4P57796 275 aa20■□□□□ 0.79
AGAP3-203ENST00000461065 DDB1Q16531 1140 aa20■□□□□ 0.79
AGAP3-203ENST00000461065 AFF2P51816 1311 aa20■□□□□ 0.79
AGAP3-203ENST00000461065 HDAC1Q13547 482 aaPredicted RBP19.99■□□□□ 0.79
AGAP3-203ENST00000461065 NFATC2IPQ8NCF5 419 aa19.99■□□□□ 0.79
AGAP3-203ENST00000461065 ADAMTS7Q9UKP4 1686 aa19.99■□□□□ 0.79
AGAP3-203ENST00000461065 ERVV-2B6SEH9 535 aa19.99■□□□□ 0.79
AGAP3-203ENST00000461065 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
AGAP3-203ENST00000461065 SOS1Q07889 1333 aaPredicted RBP19.98■□□□□ 0.79
AGAP3-203ENST00000461065 TNS2Q63HR2 1409 aa19.97■□□□□ 0.79
AGAP3-203ENST00000461065 FAM98CQ17RN3 349 aaKnown RBP19.97■□□□□ 0.79
AGAP3-203ENST00000461065 CHMP4BQ9H444 224 aaKnown RBP19.97■□□□□ 0.79
AGAP3-203ENST00000461065 EIF4A1P60842 406 aaKnown RBP19.96■□□□□ 0.79
AGAP3-203ENST00000461065 TMEM57Q8N5G2 664 aa19.96■□□□□ 0.79
AGAP3-203ENST00000461065 TRPC5Q9UL62 973 aaPredicted RBP19.96■□□□□ 0.79
AGAP3-203ENST00000461065 UPF2Q9HAU5 1272 aaKnown RBP19.95■□□□□ 0.78
AGAP3-203ENST00000461065 MRC1P22897 1456 aa19.95■□□□□ 0.78
AGAP3-203ENST00000461065 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
AGAP3-203ENST00000461065 GJD4Q96KN9 370 aaPredicted RBP19.94■□□□□ 0.78
AGAP3-203ENST00000461065 CHMP4AQ9BY43 222 aa19.94■□□□□ 0.78
AGAP3-203ENST00000461065 SCN11AQ9UI33 1791 aa19.94■□□□□ 0.78
AGAP3-203ENST00000461065 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.94■□□□□ 0.78
AGAP3-203ENST00000461065 KCNQ3O43525 872 aa19.93■□□□□ 0.78
AGAP3-203ENST00000461065 TTC5Q8N0Z6 440 aa19.93■□□□□ 0.78
AGAP3-203ENST00000461065 ARHGAP45Q92619 1136 aa19.93■□□□□ 0.78
AGAP3-203ENST00000461065 ZBTB40Q9NUA8 1239 aa19.93■□□□□ 0.78
AGAP3-203ENST00000461065 A0A0G2JS52 829 aa19.93■□□□□ 0.78
AGAP3-203ENST00000461065 HOXB7P09629 217 aa19.93■□□□□ 0.78
AGAP3-203ENST00000461065 SHANK3Q9BYB0 1731 aa19.92■□□□□ 0.78
AGAP3-203ENST00000461065 WNK3Q9BYP7 1800 aa19.92■□□□□ 0.78
AGAP3-203ENST00000461065 DEKP35659 375 aaKnown RBP19.91■□□□□ 0.78
AGAP3-203ENST00000461065 SLC39A6Q13433 755 aa19.91■□□□□ 0.78
AGAP3-203ENST00000461065 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
AGAP3-203ENST00000461065 MRPL50Q8N5N7 158 aaKnown RBP19.91■□□□□ 0.78
AGAP3-203ENST00000461065 TMOD3Q9NYL9 352 aa19.91■□□□□ 0.78
AGAP3-203ENST00000461065 ATRNO75882 1429 aa19.91■□□□□ 0.78
AGAP3-203ENST00000461065 QTRT2Q9H974 415 aaKnown RBP19.9■□□□□ 0.78
AGAP3-203ENST00000461065 SMC5Q8IY18 1101 aa19.9■□□□□ 0.78
AGAP3-203ENST00000461065 STK31Q9BXU1 1019 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms