RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
NUP98-208ENST00000461047 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
NUP98-208ENST00000461047 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
NUP98-208ENST00000461047 ABCC11Q96J66 1382 aa8.3□□□□□ -1.08
NUP98-208ENST00000461047 PPLO60437 1756 aa8.3□□□□□ -1.08
NUP98-208ENST00000461047 ADAMTS13Q76LX8 1427 aa8.29□□□□□ -1.08
NUP98-208ENST00000461047 ALKQ9UM73 1620 aa8.29□□□□□ -1.08
NUP98-208ENST00000461047 HOXA2O43364 376 aa8.29□□□□□ -1.08
NUP98-208ENST00000461047 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
NUP98-208ENST00000461047 SSTR3P32745 418 aaPredicted RBP8.29□□□□□ -1.08
NUP98-208ENST00000461047 FAM160A2Q8N612 972 aaPredicted RBP8.29□□□□□ -1.08
NUP98-208ENST00000461047 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
NUP98-208ENST00000461047 METP08581 1390 aa8.29□□□□□ -1.08
NUP98-208ENST00000461047 LAMC1P11047 1609 aa8.29□□□□□ -1.08
NUP98-208ENST00000461047 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
NUP98-208ENST00000461047 IQGAP1P46940 1657 aa8.28□□□□□ -1.08
NUP98-208ENST00000461047 AMHR2Q16671 573 aa8.28□□□□□ -1.08
NUP98-208ENST00000461047 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
NUP98-208ENST00000461047 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
NUP98-208ENST00000461047 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
NUP98-208ENST00000461047 MYO5BQ9ULV0 1848 aa8.28□□□□□ -1.08
NUP98-208ENST00000461047 RALGAPBQ86X10 1494 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 GPRASP1Q5JY77 1395 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 POLR1AO95602 1720 aaPredicted RBP8.27□□□□□ -1.09
NUP98-208ENST00000461047 RPIAP49247 311 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
NUP98-208ENST00000461047 PRAM1Q96QH2 718 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 FAM135BQ49AJ0 1406 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 NCOA3Q9Y6Q9 1424 aa8.27□□□□□ -1.09
NUP98-208ENST00000461047 ZNF335Q9H4Z2 1342 aaPredicted RBP8.27□□□□□ -1.09
NUP98-208ENST00000461047 CENPJQ9HC77 1338 aaPredicted RBP8.27□□□□□ -1.09
NUP98-208ENST00000461047 IFT172Q9UG01 1749 aa8.26□□□□□ -1.09
NUP98-208ENST00000461047 ATF3P18847 181 aa8.26□□□□□ -1.09
NUP98-208ENST00000461047 AK7Q96M32 723 aa8.26□□□□□ -1.09
NUP98-208ENST00000461047 C19orf44Q9H6X5 657 aa8.26□□□□□ -1.09
NUP98-208ENST00000461047 CPS1P31327 1500 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 TMF1P82094 1093 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 SAFB2Q14151 953 aaKnown RBP eCLIP8.25□□□□□ -1.09
NUP98-208ENST00000461047 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 GIGYF2Q6Y7W6 1299 aaKnown RBP8.25□□□□□ -1.09
NUP98-208ENST00000461047 WAPLQ7Z5K2 1190 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 HLA-CQ95604 372 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 REPIN1Q9BWE0 567 aaKnown RBP8.25□□□□□ -1.09
NUP98-208ENST00000461047 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 EVC2Q86UK5 1308 aa8.25□□□□□ -1.09
NUP98-208ENST00000461047 NKTRP30414 1462 aaKnown RBP8.25□□□□□ -1.09
NUP98-208ENST00000461047 MSH6P52701 1360 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 USP47Q96K76 1375 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 TECPR2O15040 1411 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 ST20-MTHFSA0A0A6YYL1 179 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 PRR20EP86478 221 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 PRR20CP86479 221 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 PRR20DP86480 221 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 PRR20BP86481 221 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 PRR20AP86496 221 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 FOXC1Q12948 553 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 STRCQ7RTU9 1775 aa8.24□□□□□ -1.09
NUP98-208ENST00000461047 TMEM94Q12767 1356 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 C6orf229H3BNL8 230 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 TOM1O60784 492 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 FDX1P10109 184 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 HSPA5P11021 654 aaKnown RBP8.23□□□□□ -1.09
NUP98-208ENST00000461047 MMP16P51512 607 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 SRPK2P78362 688 aaKnown RBP8.23□□□□□ -1.09
NUP98-208ENST00000461047 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 CCDC24Q8N4L8 307 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 DLC1Q96QB1 1528 aa8.23□□□□□ -1.09
NUP98-208ENST00000461047 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 ADGRB1O14514 1584 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 TRPM1Q7Z4N2 1603 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 PTPRUQ92729 1446 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 TRIM66O15016 1216 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 TRIM67Q6ZTA4 783 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
NUP98-208ENST00000461047 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
NUP98-208ENST00000461047 NRXN3Q9Y4C0 1643 aa8.21□□□□□ -1.09
NUP98-208ENST00000461047 FAM187AA6NFU0 413 aa8.21□□□□□ -1.1
NUP98-208ENST00000461047 WASLO00401 505 aaPredicted RBP8.21□□□□□ -1.1
NUP98-208ENST00000461047 DXOO77932 396 aaKnown RBP8.21□□□□□ -1.1
NUP98-208ENST00000461047 RETREG3Q86VR2 466 aa8.21□□□□□ -1.1
NUP98-208ENST00000461047 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.1
NUP98-208ENST00000461047 CDK19Q9BWU1 502 aa8.21□□□□□ -1.1
NUP98-208ENST00000461047 GDF9O60383 454 aa8.2□□□□□ -1.1
NUP98-208ENST00000461047 DGAT1O75907 488 aa8.2□□□□□ -1.1
NUP98-208ENST00000461047 PARP9Q8IXQ6 854 aa8.2□□□□□ -1.1
NUP98-208ENST00000461047 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
NUP98-208ENST00000461047 HIRIP3Q9BW71 556 aaPredicted RBP8.2□□□□□ -1.1
NUP98-208ENST00000461047 SBNO2Q9Y2G9 1366 aa8.2□□□□□ -1.1
NUP98-208ENST00000461047 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 NWD1Q149M9 1564 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 JUNDP17535 347 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 POLR3GLQ9BT43 218 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 SLAIN2Q9P270 581 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 DCCP43146 1447 aa8.19□□□□□ -1.1
NUP98-208ENST00000461047 ADGRL3Q9HAR2 1447 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms