RNA–Protein interactions for RNA: ENST00000460902.2

SLC22A1-204, Transcript of solute carrier family 22 member 1, humanhuman

TSL 5

Gene SLC22A1, Length 1,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A1-204ENST00000460902 ITGB4P16144 1822 aa23.26■■□□□ 1.31
SLC22A1-204ENST00000460902 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
SLC22A1-204ENST00000460902 NKX1-1Q15270 411 aaPredicted RBP23.25■■□□□ 1.31
SLC22A1-204ENST00000460902 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
SLC22A1-204ENST00000460902 KAT6BQ8WYB5 2073 aa23.25■■□□□ 1.31
SLC22A1-204ENST00000460902 ELL2O00472 640 aaPredicted RBP23.24■■□□□ 1.31
SLC22A1-204ENST00000460902 CABP4P57796 275 aa23.24■■□□□ 1.31
SLC22A1-204ENST00000460902 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
SLC22A1-204ENST00000460902 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
SLC22A1-204ENST00000460902 NFATC2IPQ8NCF5 419 aa23.23■■□□□ 1.31
SLC22A1-204ENST00000460902 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
SLC22A1-204ENST00000460902 KCNQ3O43525 872 aa23.22■■□□□ 1.31
SLC22A1-204ENST00000460902 MARCH10Q8NA82 808 aaPredicted RBP23.22■■□□□ 1.31
SLC22A1-204ENST00000460902 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
SLC22A1-204ENST00000460902 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
SLC22A1-204ENST00000460902 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
SLC22A1-204ENST00000460902 ERVV-2B6SEH9 535 aa23.19■■□□□ 1.3
SLC22A1-204ENST00000460902 BCAR3O75815 825 aa23.19■■□□□ 1.3
SLC22A1-204ENST00000460902 CT47B1P0C2W7 299 aaPredicted RBP23.19■■□□□ 1.3
SLC22A1-204ENST00000460902 SLC39A6Q13433 755 aa23.19■■□□□ 1.3
SLC22A1-204ENST00000460902 ZNF772Q68DY9 489 aaPredicted RBP23.19■■□□□ 1.3
SLC22A1-204ENST00000460902 RARSP54136 660 aaKnown RBP23.18■■□□□ 1.3
SLC22A1-204ENST00000460902 VAMP4O75379 141 aa23.17■■□□□ 1.3
SLC22A1-204ENST00000460902 RRP1P56182 461 aaKnown RBP23.17■■□□□ 1.3
SLC22A1-204ENST00000460902 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
SLC22A1-204ENST00000460902 BRWD3Q6RI45 1802 aa23.17■■□□□ 1.3
SLC22A1-204ENST00000460902 C5P01031 1676 aa23.16■■□□□ 1.3
SLC22A1-204ENST00000460902 TCERG1O14776 1098 aaKnown RBP23.16■■□□□ 1.3
SLC22A1-204ENST00000460902 EIF4A1P60842 406 aaKnown RBP23.16■■□□□ 1.3
SLC22A1-204ENST00000460902 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
SLC22A1-204ENST00000460902 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
SLC22A1-204ENST00000460902 UBR2Q8IWV8 1755 aa23.15■■□□□ 1.3
SLC22A1-204ENST00000460902 PLIN1O60240 522 aa23.15■■□□□ 1.3
SLC22A1-204ENST00000460902 NEFLP07196 543 aa23.15■■□□□ 1.3
SLC22A1-204ENST00000460902 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
SLC22A1-204ENST00000460902 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
SLC22A1-204ENST00000460902 RNF123Q5XPI4 1314 aa23.14■■□□□ 1.29
SLC22A1-204ENST00000460902 ZNF790Q6PG37 636 aa23.14■■□□□ 1.29
SLC22A1-204ENST00000460902 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.29
SLC22A1-204ENST00000460902 ACSBG1Q96GR2 724 aa23.14■■□□□ 1.29
SLC22A1-204ENST00000460902 TTC5Q8N0Z6 440 aa23.13■■□□□ 1.29
SLC22A1-204ENST00000460902 ONECUT3O60422 494 aaPredicted RBP23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 PRIM1P49642 420 aaKnown RBP23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 RBM6P78332 1123 aaKnown RBP23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 FAM182BQ5T319 152 aa23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 PIGBQ92521 554 aa23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 NECTIN2Q92692 538 aa23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
SLC22A1-204ENST00000460902 KCPQ6ZWJ8 1503 aa23.1■■□□□ 1.29
SLC22A1-204ENST00000460902 BCL9O00512 1426 aa23.1■■□□□ 1.29
SLC22A1-204ENST00000460902 ALDH1L2Q3SY69 923 aa23.1■■□□□ 1.29
SLC22A1-204ENST00000460902 FRAT1Q92837 279 aaPredicted RBP23.1■■□□□ 1.29
SLC22A1-204ENST00000460902 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
SLC22A1-204ENST00000460902 ZNF428Q96B54 188 aa23.09■■□□□ 1.29
SLC22A1-204ENST00000460902 ZNF496Q96IT1 587 aaPredicted RBP23.09■■□□□ 1.29
SLC22A1-204ENST00000460902 FKBP8Q14318 412 aa23.08■■□□□ 1.29
SLC22A1-204ENST00000460902 RGS17Q9UGC6 210 aaPredicted RBP23.08■■□□□ 1.29
SLC22A1-204ENST00000460902 NHSQ6T4R5 1651 aa23.08■■□□□ 1.28
SLC22A1-204ENST00000460902 SBF2Q86WG5 1849 aa23.08■■□□□ 1.28
SLC22A1-204ENST00000460902 PRAMEF22A3QJZ6 481 aa23.07■■□□□ 1.28
SLC22A1-204ENST00000460902 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.07■■□□□ 1.28
SLC22A1-204ENST00000460902 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
SLC22A1-204ENST00000460902 ASAP1Q9ULH1 1129 aa23.07■■□□□ 1.28
SLC22A1-204ENST00000460902 HEG1Q9ULI3 1381 aa23.07■■□□□ 1.28
SLC22A1-204ENST00000460902 EIF2S2P20042 333 aaKnown RBP23.06■■□□□ 1.28
SLC22A1-204ENST00000460902 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
SLC22A1-204ENST00000460902 MRPL50Q8N5N7 158 aaKnown RBP23.06■■□□□ 1.28
SLC22A1-204ENST00000460902 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
SLC22A1-204ENST00000460902 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
SLC22A1-204ENST00000460902 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
SLC22A1-204ENST00000460902 HOXB7P09629 217 aa23.05■■□□□ 1.28
SLC22A1-204ENST00000460902 RXRBP28702 533 aa23.05■■□□□ 1.28
SLC22A1-204ENST00000460902 ATG3Q9NT62 314 aa23.05■■□□□ 1.28
SLC22A1-204ENST00000460902 BTAF1O14981 1849 aa23.04■■□□□ 1.28
SLC22A1-204ENST00000460902 KCNQ2O43526 872 aa23.04■■□□□ 1.28
SLC22A1-204ENST00000460902 C20orf194Q5TEA3 1177 aa23.04■■□□□ 1.28
SLC22A1-204ENST00000460902 POTEAQ6S8J7 498 aa23.04■■□□□ 1.28
SLC22A1-204ENST00000460902 ILDR1Q86SU0 546 aaPredicted RBP23.04■■□□□ 1.28
SLC22A1-204ENST00000460902 CACNA1FO60840 1977 aa23.04■■□□□ 1.28
SLC22A1-204ENST00000460902 KIF16BQ96L93 1317 aa23.03■■□□□ 1.28
SLC22A1-204ENST00000460902 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
SLC22A1-204ENST00000460902 NOB1Q9ULX3 412 aaKnown RBP23.03■■□□□ 1.28
SLC22A1-204ENST00000460902 TNNQ9UQP3 1299 aa23.03■■□□□ 1.28
SLC22A1-204ENST00000460902 RGS12O14924 1447 aa23.02■■□□□ 1.28
SLC22A1-204ENST00000460902 KRT27Q7Z3Y8 459 aa23.02■■□□□ 1.28
SLC22A1-204ENST00000460902 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
SLC22A1-204ENST00000460902 SLC4A2P04920 1241 aa23■■□□□ 1.27
SLC22A1-204ENST00000460902 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
SLC22A1-204ENST00000460902 ZKSCAN2Q63HK3 967 aa23■■□□□ 1.27
SLC22A1-204ENST00000460902 RBM42Q9BTD8 480 aaKnown RBP23■■□□□ 1.27
SLC22A1-204ENST00000460902 PTF1AQ7RTS3 328 aa22.99■■□□□ 1.27
SLC22A1-204ENST00000460902 TJP1Q07157 1748 aa22.99■■□□□ 1.27
SLC22A1-204ENST00000460902 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
SLC22A1-204ENST00000460902 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
SLC22A1-204ENST00000460902 ANXA1P04083 346 aa22.98■■□□□ 1.27
SLC22A1-204ENST00000460902 BRPF1P55201 1214 aaPredicted RBP22.98■■□□□ 1.27
SLC22A1-204ENST00000460902 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
SLC22A1-204ENST00000460902 G2E3Q7L622 706 aa22.97■■□□□ 1.27
SLC22A1-204ENST00000460902 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms