RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
CSDC2-202ENST00000460790 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
CSDC2-202ENST00000460790 MRC1P22897 1456 aa14.08□□□□□ -0.16
CSDC2-202ENST00000460790 VAMP4O75379 141 aa14.08□□□□□ -0.16
CSDC2-202ENST00000460790 CABP4P57796 275 aa14.08□□□□□ -0.16
CSDC2-202ENST00000460790 TSPYL6Q8N831 410 aa14.08□□□□□ -0.16
CSDC2-202ENST00000460790 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
CSDC2-202ENST00000460790 GLI3P10071 1580 aa14.08□□□□□ -0.16
CSDC2-202ENST00000460790 ITGB4P16144 1822 aa14.07□□□□□ -0.16
CSDC2-202ENST00000460790 RARSP54136 660 aaKnown RBP14.07□□□□□ -0.16
CSDC2-202ENST00000460790 ZNF772Q68DY9 489 aaPredicted RBP14.07□□□□□ -0.16
CSDC2-202ENST00000460790 ZNF428Q96B54 188 aa14.07□□□□□ -0.16
CSDC2-202ENST00000460790 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
CSDC2-202ENST00000460790 MARCH10Q8NA82 808 aaPredicted RBP14.06□□□□□ -0.16
CSDC2-202ENST00000460790 THSD7AQ9UPZ6 1657 aa14.06□□□□□ -0.16
CSDC2-202ENST00000460790 TOGARAM1Q9Y4F4 1720 aa14.05□□□□□ -0.16
CSDC2-202ENST00000460790 ELL2O00472 640 aaPredicted RBP14.05□□□□□ -0.16
CSDC2-202ENST00000460790 KCNQ3O43525 872 aa14.05□□□□□ -0.16
CSDC2-202ENST00000460790 EIF4A1P60842 406 aaKnown RBP14.05□□□□□ -0.16
CSDC2-202ENST00000460790 KRT24Q2M2I5 525 aa14.05□□□□□ -0.16
CSDC2-202ENST00000460790 CACNA1FO60840 1977 aa14.05□□□□□ -0.16
CSDC2-202ENST00000460790 BCAR3O75815 825 aa14.04□□□□□ -0.16
CSDC2-202ENST00000460790 ALDH1L2Q3SY69 923 aa14.04□□□□□ -0.16
CSDC2-202ENST00000460790 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
CSDC2-202ENST00000460790 SOS1Q07889 1333 aaPredicted RBP14.04□□□□□ -0.16
CSDC2-202ENST00000460790 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
CSDC2-202ENST00000460790 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
CSDC2-202ENST00000460790 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
CSDC2-202ENST00000460790 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
CSDC2-202ENST00000460790 A0A0G2JS52 829 aa14.02□□□□□ -0.17
CSDC2-202ENST00000460790 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
CSDC2-202ENST00000460790 MYT1Q01538 1121 aa14.02□□□□□ -0.17
CSDC2-202ENST00000460790 SEPT12Q8IYM1 358 aa14.02□□□□□ -0.17
CSDC2-202ENST00000460790 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
CSDC2-202ENST00000460790 HOXB7P09629 217 aa14.01□□□□□ -0.17
CSDC2-202ENST00000460790 RBM6P78332 1123 aaKnown RBP14.01□□□□□ -0.17
CSDC2-202ENST00000460790 PIGBQ92521 554 aa14.01□□□□□ -0.17
CSDC2-202ENST00000460790 PLIN1O60240 522 aa14□□□□□ -0.17
CSDC2-202ENST00000460790 GIGYF1O75420 1035 aaPredicted RBP14□□□□□ -0.17
CSDC2-202ENST00000460790 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
CSDC2-202ENST00000460790 TTC5Q8N0Z6 440 aa14□□□□□ -0.17
CSDC2-202ENST00000460790 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
CSDC2-202ENST00000460790 BCL2L13Q9BXK5 485 aa14□□□□□ -0.17
CSDC2-202ENST00000460790 SMC4Q9NTJ3 1288 aa14□□□□□ -0.17
CSDC2-202ENST00000460790 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 NEFLP07196 543 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
CSDC2-202ENST00000460790 ZNF496Q96IT1 587 aaPredicted RBP13.99□□□□□ -0.17
CSDC2-202ENST00000460790 CHMP4AQ9BY43 222 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 RGS17Q9UGC6 210 aaPredicted RBP13.99□□□□□ -0.17
CSDC2-202ENST00000460790 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 PAPPAQ13219 1627 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 BRWD3Q6RI45 1802 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
CSDC2-202ENST00000460790 BCL9O00512 1426 aa13.98□□□□□ -0.17
CSDC2-202ENST00000460790 CCDC30Q5VVM6 783 aa13.98□□□□□ -0.17
CSDC2-202ENST00000460790 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
CSDC2-202ENST00000460790 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
CSDC2-202ENST00000460790 FKBP8Q14318 412 aa13.97□□□□□ -0.17
CSDC2-202ENST00000460790 SYTL4Q96C24 671 aaPredicted RBP13.97□□□□□ -0.17
CSDC2-202ENST00000460790 ACSBG1Q96GR2 724 aa13.97□□□□□ -0.17
CSDC2-202ENST00000460790 ATG3Q9NT62 314 aa13.97□□□□□ -0.17
CSDC2-202ENST00000460790 ASAP1Q9ULH1 1129 aa13.97□□□□□ -0.17
CSDC2-202ENST00000460790 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
CSDC2-202ENST00000460790 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
CSDC2-202ENST00000460790 RXRBP28702 533 aa13.96□□□□□ -0.17
CSDC2-202ENST00000460790 FRAT1Q92837 279 aaPredicted RBP13.96□□□□□ -0.17
CSDC2-202ENST00000460790 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.17
CSDC2-202ENST00000460790 SBF2Q86WG5 1849 aa13.96□□□□□ -0.17
CSDC2-202ENST00000460790 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 PRAMEF22A3QJZ6 481 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 EIF2S2P20042 333 aaKnown RBP13.95□□□□□ -0.18
CSDC2-202ENST00000460790 IRX6P78412 446 aaPredicted RBP13.95□□□□□ -0.18
CSDC2-202ENST00000460790 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 HDGFL1Q5TGJ6 251 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 ZKSCAN2Q63HK3 967 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 ARHGAP45Q92619 1136 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
CSDC2-202ENST00000460790 KCNQ2O43526 872 aa13.94□□□□□ -0.18
CSDC2-202ENST00000460790 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
CSDC2-202ENST00000460790 C20orf194Q5TEA3 1177 aa13.94□□□□□ -0.18
CSDC2-202ENST00000460790 ERICH6BQ5W0A0 696 aa13.94□□□□□ -0.18
CSDC2-202ENST00000460790 NECTIN2Q92692 538 aa13.94□□□□□ -0.18
CSDC2-202ENST00000460790 STK31Q9BXU1 1019 aa13.94□□□□□ -0.18
CSDC2-202ENST00000460790 C5P01031 1676 aa13.94□□□□□ -0.18
CSDC2-202ENST00000460790 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
CSDC2-202ENST00000460790 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
CSDC2-202ENST00000460790 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
CSDC2-202ENST00000460790 ATF7IPQ6VMQ6 1270 aa13.93□□□□□ -0.18
CSDC2-202ENST00000460790 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
CSDC2-202ENST00000460790 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
CSDC2-202ENST00000460790 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
CSDC2-202ENST00000460790 MS4A1P11836 297 aa13.92□□□□□ -0.18
CSDC2-202ENST00000460790 TRIM27P14373 513 aa13.92□□□□□ -0.18
CSDC2-202ENST00000460790 TEX13AQ9BXU3 409 aaPredicted RBP13.92□□□□□ -0.18
CSDC2-202ENST00000460790 FAM196AQ6ZSG2 479 aa13.91□□□□□ -0.18
CSDC2-202ENST00000460790 G2E3Q7L622 706 aa13.91□□□□□ -0.18
CSDC2-202ENST00000460790 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
CSDC2-202ENST00000460790 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms