RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 HSP90AB2PQ58FF8 381 aa18.87■□□□□ 0.61
SCAMP4-206ENST00000460767 ARFGEF1Q9Y6D6 1849 aa18.86■□□□□ 0.61
SCAMP4-206ENST00000460767 N4BP2Q86UW6 1770 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-206ENST00000460767 TGFB2P61812 414 aa18.86■□□□□ 0.61
SCAMP4-206ENST00000460767 LINC00116Q8NCU8 138 aa18.86■□□□□ 0.61
SCAMP4-206ENST00000460767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCAMP4-206ENST00000460767 KDRP35968 1356 aa18.85■□□□□ 0.61
SCAMP4-206ENST00000460767 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
SCAMP4-206ENST00000460767 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
SCAMP4-206ENST00000460767 C4AP0C0L4 1744 aa18.85■□□□□ 0.61
SCAMP4-206ENST00000460767 COL5A3P25940 1745 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-206ENST00000460767 GNPATO15228 680 aa18.82■□□□□ 0.6
SCAMP4-206ENST00000460767 MMP10P09238 476 aa18.82■□□□□ 0.6
SCAMP4-206ENST00000460767 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
SCAMP4-206ENST00000460767 ITPK1Q13572 414 aa18.81■□□□□ 0.6
SCAMP4-206ENST00000460767 RBM46Q8TBY0 533 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-206ENST00000460767 TNRC6CQ9HCJ0 1690 aaKnown RBP18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 ADRA2BP18089 450 aa18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 SMIM5Q71RC9 77 aa18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 JMYQ8N9B5 988 aa18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 TMOD3Q9NYL9 352 aa18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 WWC3Q9ULE0 1092 aa18.8■□□□□ 0.6
SCAMP4-206ENST00000460767 WASHC2AQ641Q2 1341 aa18.79■□□□□ 0.6
SCAMP4-206ENST00000460767 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
SCAMP4-206ENST00000460767 PANK3Q9H999 370 aa18.78■□□□□ 0.6
SCAMP4-206ENST00000460767 FSTL1Q12841 308 aa18.77■□□□□ 0.6
SCAMP4-206ENST00000460767 NMRK2Q9NPI5 230 aa18.77■□□□□ 0.6
SCAMP4-206ENST00000460767 ASAP1Q9ULH1 1129 aa18.77■□□□□ 0.6
SCAMP4-206ENST00000460767 BCS1LQ9Y276 419 aa18.77■□□□□ 0.6
SCAMP4-206ENST00000460767 CNTNAP4Q9C0A0 1308 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 PER1O15534 1290 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 PHKG2P15735 406 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 RC3H1Q5TC82 1133 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 KLRG1Q96E93 195 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 ATG3Q9NT62 314 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 CCDC87Q9NVE4 849 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 RTCBQ9Y3I0 505 aaKnown RBP18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
SCAMP4-206ENST00000460767 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
SCAMP4-206ENST00000460767 A0A0G2JLW4 131 aa18.73■□□□□ 0.59
SCAMP4-206ENST00000460767 GYS1P13807 737 aa18.73■□□□□ 0.59
SCAMP4-206ENST00000460767 EYA1Q99502 592 aa18.73■□□□□ 0.59
SCAMP4-206ENST00000460767 DPEP1P16444 411 aa18.72■□□□□ 0.59
SCAMP4-206ENST00000460767 AMER1Q5JTC6 1135 aaPredicted RBP18.72■□□□□ 0.59
SCAMP4-206ENST00000460767 ARHGAP27Q6ZUM4 889 aa18.72■□□□□ 0.59
SCAMP4-206ENST00000460767 FCHSD2O94868 740 aa18.71■□□□□ 0.59
SCAMP4-206ENST00000460767 KCNA3P22001 575 aa18.71■□□□□ 0.59
SCAMP4-206ENST00000460767 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
SCAMP4-206ENST00000460767 SLC4A9Q96Q91 983 aa18.71■□□□□ 0.59
SCAMP4-206ENST00000460767 SBF1O95248 1867 aa18.71■□□□□ 0.59
SCAMP4-206ENST00000460767 KDM2BQ8NHM5 1336 aa18.71■□□□□ 0.59
SCAMP4-206ENST00000460767 KCPQ6ZWJ8 1503 aa18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 MYH14Q7Z406 1995 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 RPS6KA4O75676 772 aa18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 C9orf131Q5VYM1 1079 aa18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 ARHGEF1Q92888 912 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 POLR3GLQ9BT43 218 aa18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 ZC3H4Q9UPT8 1303 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-206ENST00000460767 ADAMTS7Q9UKP4 1686 aa18.69■□□□□ 0.58
SCAMP4-206ENST00000460767 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
SCAMP4-206ENST00000460767 C16orf71Q8IYS4 520 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-206ENST00000460767 PARP3Q9Y6F1 533 aa18.69■□□□□ 0.58
SCAMP4-206ENST00000460767 COL13A1Q5TAT6 717 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-206ENST00000460767 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
SCAMP4-206ENST00000460767 KDM6AO15550 1401 aaPredicted RBP18.67■□□□□ 0.58
SCAMP4-206ENST00000460767 TJP1Q07157 1748 aa18.67■□□□□ 0.58
SCAMP4-206ENST00000460767 HSP90AB1P08238 724 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-206ENST00000460767 RFC4P35249 363 aa18.67■□□□□ 0.58
SCAMP4-206ENST00000460767 DLEC1Q9Y238 1755 aa18.66■□□□□ 0.58
SCAMP4-206ENST00000460767 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
SCAMP4-206ENST00000460767 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
SCAMP4-206ENST00000460767 NRXN2Q9P2S2 1712 aa18.64■□□□□ 0.57
SCAMP4-206ENST00000460767 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
SCAMP4-206ENST00000460767 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.57
SCAMP4-206ENST00000460767 PRELPP51888 382 aa18.63■□□□□ 0.57
SCAMP4-206ENST00000460767 RNF181Q9P0P0 153 aa18.63■□□□□ 0.57
SCAMP4-206ENST00000460767 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
SCAMP4-206ENST00000460767 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
SCAMP4-206ENST00000460767 HTRA3P83110 453 aa18.62■□□□□ 0.57
SCAMP4-206ENST00000460767 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-206ENST00000460767 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-206ENST00000460767 TIAM2Q8IVF5 1701 aa18.6■□□□□ 0.57
SCAMP4-206ENST00000460767 DDR1Q08345 913 aa18.6■□□□□ 0.57
SCAMP4-206ENST00000460767 TNS4Q8IZW8 715 aa18.6■□□□□ 0.57
SCAMP4-206ENST00000460767 CRKLP46109 303 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-206ENST00000460767 AMOTQ4VCS5 1084 aa18.59■□□□□ 0.57
SCAMP4-206ENST00000460767 RRAGCQ9HB90 399 aa18.59■□□□□ 0.57
SCAMP4-206ENST00000460767 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.57
SCAMP4-206ENST00000460767 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-206ENST00000460767 FKBP8Q14318 412 aa18.58■□□□□ 0.56
SCAMP4-206ENST00000460767 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-206ENST00000460767 TM4SF1P30408 202 aa18.57■□□□□ 0.56
SCAMP4-206ENST00000460767 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
SCAMP4-206ENST00000460767 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-206ENST00000460767 CABP4P57796 275 aa18.56■□□□□ 0.56
SCAMP4-206ENST00000460767 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
SCAMP4-206ENST00000460767 MRC1P22897 1456 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms