RNA–Protein interactions for RNA: ENST00000460741.1

HOMER1-203, Transcript of homer scaffold protein 1, humanhuman

TSL 2

Gene HOMER1, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-203ENST00000460741 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
HOMER1-203ENST00000460741 RECKO95980 971 aa9.6□□□□□ -0.87
HOMER1-203ENST00000460741 HSP90B1P14625 803 aaKnown RBP9.6□□□□□ -0.87
HOMER1-203ENST00000460741 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
HOMER1-203ENST00000460741 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
HOMER1-203ENST00000460741 MRGPRX2Q96LB1 330 aa9.6□□□□□ -0.87
HOMER1-203ENST00000460741 CARD14Q9BXL6 1004 aa9.6□□□□□ -0.87
HOMER1-203ENST00000460741 C21orf2O43822 256 aa9.59□□□□□ -0.87
HOMER1-203ENST00000460741 VAMP1P23763 118 aa9.59□□□□□ -0.87
HOMER1-203ENST00000460741 ASB16Q96NS5 453 aa9.59□□□□□ -0.87
HOMER1-203ENST00000460741 PUS7Q96PZ0 661 aaKnown RBP9.59□□□□□ -0.87
HOMER1-203ENST00000460741 DCTN4Q9UJW0 460 aa9.59□□□□□ -0.87
HOMER1-203ENST00000460741 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
HOMER1-203ENST00000460741 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
HOMER1-203ENST00000460741 HMGB1P09429 215 aaKnown RBP9.58□□□□□ -0.88
HOMER1-203ENST00000460741 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
HOMER1-203ENST00000460741 SH3BP5LQ7L8J4 393 aa9.58□□□□□ -0.88
HOMER1-203ENST00000460741 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
HOMER1-203ENST00000460741 HINFPQ9BQA5 517 aa9.58□□□□□ -0.88
HOMER1-203ENST00000460741 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
HOMER1-203ENST00000460741 SKOR1P84550 965 aa9.57□□□□□ -0.88
HOMER1-203ENST00000460741 ECM1Q16610 540 aa9.57□□□□□ -0.88
HOMER1-203ENST00000460741 CAPN12Q6ZSI9 719 aa9.57□□□□□ -0.88
HOMER1-203ENST00000460741 FAM177A1Q8N128 213 aaPredicted RBP9.57□□□□□ -0.88
HOMER1-203ENST00000460741 C8orf37Q96NL8 207 aa9.57□□□□□ -0.88
HOMER1-203ENST00000460741 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
HOMER1-203ENST00000460741 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
HOMER1-203ENST00000460741 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
HOMER1-203ENST00000460741 SREK1Q8WXA9 508 aaKnown RBP9.56□□□□□ -0.88
HOMER1-203ENST00000460741 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
HOMER1-203ENST00000460741 PCDHGA11Q9Y5H2 935 aa9.56□□□□□ -0.88
HOMER1-203ENST00000460741 ARHGAP4P98171 946 aa9.55□□□□□ -0.88
HOMER1-203ENST00000460741 FKBP5Q13451 457 aaPredicted RBP9.55□□□□□ -0.88
HOMER1-203ENST00000460741 TSNAXIP1Q2TAA8 658 aa9.55□□□□□ -0.88
HOMER1-203ENST00000460741 ZSCAN29Q8IWY8 852 aaPredicted RBP9.55□□□□□ -0.88
HOMER1-203ENST00000460741 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
HOMER1-203ENST00000460741 DRC1Q96MC2 740 aa9.55□□□□□ -0.88
HOMER1-203ENST00000460741 PURBQ96QR8 312 aaKnown RBP9.55□□□□□ -0.88
HOMER1-203ENST00000460741 J3QL48 77 aa9.54□□□□□ -0.88
HOMER1-203ENST00000460741 ZC3H6P61129 1189 aaKnown RBP9.54□□□□□ -0.88
HOMER1-203ENST00000460741 FKBP4Q02790 459 aaKnown RBP eCLIP9.54□□□□□ -0.88
HOMER1-203ENST00000460741 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
HOMER1-203ENST00000460741 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
HOMER1-203ENST00000460741 GMPRP36959 345 aa9.52□□□□□ -0.89
HOMER1-203ENST00000460741 SF3B2Q13435 895 aaKnown RBP9.52□□□□□ -0.89
HOMER1-203ENST00000460741 EAPPQ56P03 285 aaPredicted RBP9.52□□□□□ -0.89
HOMER1-203ENST00000460741 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
HOMER1-203ENST00000460741 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
HOMER1-203ENST00000460741 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
HOMER1-203ENST00000460741 WEE1P30291 646 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 SH3BP2P78314 561 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 NAALADL2Q58DX5 795 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 RGL4Q8IZJ4 473 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 HPS1Q92902 700 aa9.51□□□□□ -0.89
HOMER1-203ENST00000460741 CDK11AQ9UQ88 783 aaPredicted RBP9.51□□□□□ -0.89
HOMER1-203ENST00000460741 NAA30Q147X3 362 aaPredicted RBP9.5□□□□□ -0.89
HOMER1-203ENST00000460741 AGERQ15109 404 aa9.5□□□□□ -0.89
HOMER1-203ENST00000460741 RNF20Q5VTR2 975 aa9.5□□□□□ -0.89
HOMER1-203ENST00000460741 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
HOMER1-203ENST00000460741 ZNF511Q8NB15 262 aa9.5□□□□□ -0.89
HOMER1-203ENST00000460741 IRF7Q92985 503 aa9.5□□□□□ -0.89
HOMER1-203ENST00000460741 PPP1R1BQ9UD71 204 aaPredicted RBP9.5□□□□□ -0.89
HOMER1-203ENST00000460741 ALDH1A1P00352 501 aa9.49□□□□□ -0.89
HOMER1-203ENST00000460741 SUZ12Q15022 739 aaKnown RBP9.49□□□□□ -0.89
HOMER1-203ENST00000460741 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
HOMER1-203ENST00000460741 BAP1Q92560 729 aa9.49□□□□□ -0.89
HOMER1-203ENST00000460741 FOXJ1Q92949 421 aa9.49□□□□□ -0.89
HOMER1-203ENST00000460741 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
HOMER1-203ENST00000460741 SIAH2O43255 324 aa9.48□□□□□ -0.89
HOMER1-203ENST00000460741 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
HOMER1-203ENST00000460741 P4HBP07237 508 aaKnown RBP9.48□□□□□ -0.89
HOMER1-203ENST00000460741 USP4Q13107 963 aa9.48□□□□□ -0.89
HOMER1-203ENST00000460741 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
HOMER1-203ENST00000460741 NBPF20Q3BBV1 942 aa9.48□□□□□ -0.89
HOMER1-203ENST00000460741 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
HOMER1-203ENST00000460741 BCL11AQ9H165 835 aa9.48□□□□□ -0.89
HOMER1-203ENST00000460741 VARSP26640 1264 aaKnown RBP9.47□□□□□ -0.89
HOMER1-203ENST00000460741 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
HOMER1-203ENST00000460741 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
HOMER1-203ENST00000460741 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
HOMER1-203ENST00000460741 HELQQ8TDG4 1101 aa9.47□□□□□ -0.89
HOMER1-203ENST00000460741 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
HOMER1-203ENST00000460741 C9orf131Q5VYM1 1079 aa9.46□□□□□ -0.9
HOMER1-203ENST00000460741 TMC7Q7Z402 723 aa9.46□□□□□ -0.9
HOMER1-203ENST00000460741 BPHLQ86WA6 291 aaPredicted RBP9.46□□□□□ -0.9
HOMER1-203ENST00000460741 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
HOMER1-203ENST00000460741 M0R2N6 131 aa9.45□□□□□ -0.9
HOMER1-203ENST00000460741 RAB15P59190 212 aa9.45□□□□□ -0.9
HOMER1-203ENST00000460741 MRPL58Q14197 206 aaKnown RBP9.45□□□□□ -0.9
HOMER1-203ENST00000460741 MPNDQ8N594 471 aa9.45□□□□□ -0.9
HOMER1-203ENST00000460741 ZNF358Q9NW07 568 aa9.45□□□□□ -0.9
HOMER1-203ENST00000460741 ESPNB1AK53 854 aa9.44□□□□□ -0.9
HOMER1-203ENST00000460741 MPSTP25325 297 aa9.44□□□□□ -0.9
HOMER1-203ENST00000460741 HDLBPQ00341 1268 aaKnown RBP9.44□□□□□ -0.9
HOMER1-203ENST00000460741 H3BM21 787 aa9.43□□□□□ -0.9
HOMER1-203ENST00000460741 FAM13AO94988 1023 aa9.43□□□□□ -0.9
HOMER1-203ENST00000460741 SF3A1Q15459 793 aaKnown RBP9.43□□□□□ -0.9
HOMER1-203ENST00000460741 UBXN4Q92575 508 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms