RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
CPNE6-202ENST00000460657 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
CPNE6-202ENST00000460657 NEO1Q92859 1461 aa14.41□□□□□ -0.1
CPNE6-202ENST00000460657 CASTP20810 708 aaKnown RBP14.41□□□□□ -0.1
CPNE6-202ENST00000460657 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
CPNE6-202ENST00000460657 DNAJC2Q99543 621 aaKnown RBP14.41□□□□□ -0.1
CPNE6-202ENST00000460657 PDIA4P13667 645 aaKnown RBP14.4□□□□□ -0.1
CPNE6-202ENST00000460657 TATP17735 454 aaPredicted RBP14.4□□□□□ -0.1
CPNE6-202ENST00000460657 ANKLE2Q86XL3 938 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 EFCAB6Q5THR3 1501 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 NPHP1O15259 732 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 ATF3P18847 181 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 NCKAP5LQ9HCH0 1330 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 CCDC192P0DO97 292 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 TMX3Q96JJ7 454 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 TOMM22Q9NS69 142 aa14.4□□□□□ -0.1
CPNE6-202ENST00000460657 MLH3Q9UHC1 1453 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 MTHFSDQ2M296 383 aaKnown RBP14.39□□□□□ -0.11
CPNE6-202ENST00000460657 MTERF4Q7Z6M4 381 aaKnown RBP14.39□□□□□ -0.11
CPNE6-202ENST00000460657 SPHKAPQ2M3C7 1700 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 CLCN1P35523 988 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 ATP8B2P98198 1209 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 AMOTQ4VCS5 1084 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 PPP1R42Q7Z4L9 355 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 USP26Q9BXU7 913 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 CLASP1Q7Z460 1538 aa14.39□□□□□ -0.11
CPNE6-202ENST00000460657 ANAPC15P60006 121 aa14.38□□□□□ -0.11
CPNE6-202ENST00000460657 TRDNQ13061 729 aa14.38□□□□□ -0.11
CPNE6-202ENST00000460657 FOSBP53539 338 aa14.38□□□□□ -0.11
CPNE6-202ENST00000460657 DBF4Q9UBU7 674 aaPredicted RBP14.38□□□□□ -0.11
CPNE6-202ENST00000460657 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
CPNE6-202ENST00000460657 FLT4P35916 1363 aa14.38□□□□□ -0.11
CPNE6-202ENST00000460657 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
CPNE6-202ENST00000460657 CEBPAP49715 358 aaPredicted RBP14.38□□□□□ -0.11
CPNE6-202ENST00000460657 CHL1O00533 1208 aa14.37□□□□□ -0.11
CPNE6-202ENST00000460657 HMGN5P82970 282 aaKnown RBP14.37□□□□□ -0.11
CPNE6-202ENST00000460657 ZSCAN23Q3MJ62 389 aa14.37□□□□□ -0.11
CPNE6-202ENST00000460657 MYL6BP14649 208 aa14.37□□□□□ -0.11
CPNE6-202ENST00000460657 PRPF40BQ6NWY9 871 aaKnown RBP14.37□□□□□ -0.11
CPNE6-202ENST00000460657 ABCC4O15439 1325 aa14.37□□□□□ -0.11
CPNE6-202ENST00000460657 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
CPNE6-202ENST00000460657 SH2B1Q9NRF2 756 aaPredicted RBP14.37□□□□□ -0.11
CPNE6-202ENST00000460657 RALYLQ86SE5 291 aaKnown RBP14.36□□□□□ -0.11
CPNE6-202ENST00000460657 CCDC83Q8IWF9 413 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 TRIM5Q9C035 493 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 SPG7Q9UQ90 795 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 MSH6P52701 1360 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 EVA1CP58658 441 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 WASHC4Q2M389 1173 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 KRT32Q14532 448 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 RHPN1Q8TCX5 695 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 APPP05067 770 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 STK3Q13188 491 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 CCDC183Q5T5S1 534 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
CPNE6-202ENST00000460657 E9PCH4 1651 aa14.36□□□□□ -0.11
CPNE6-202ENST00000460657 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 FOXO3O43524 673 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 TRIM29Q14134 588 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 PI4KAP1Q8N8J0 262 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 ECHDC1Q9NTX5 307 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 KIF24Q5T7B8 1368 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 MPRIPQ6WCQ1 1025 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 ZNF592Q92610 1267 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 TNMDQ9H2S6 317 aa14.35□□□□□ -0.11
CPNE6-202ENST00000460657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
CPNE6-202ENST00000460657 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
CPNE6-202ENST00000460657 RRP9O43818 475 aaKnown RBP14.34□□□□□ -0.11
CPNE6-202ENST00000460657 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
CPNE6-202ENST00000460657 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-202ENST00000460657 MAP3K19Q56UN5 1328 aa14.34□□□□□ -0.11
CPNE6-202ENST00000460657 KINO60870 393 aaKnown RBP14.34□□□□□ -0.11
CPNE6-202ENST00000460657 MPNDQ8N594 471 aa14.34□□□□□ -0.11
CPNE6-202ENST00000460657 SDF4Q9BRK5 362 aa14.34□□□□□ -0.11
CPNE6-202ENST00000460657 OTUD7AQ8TE49 926 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-202ENST00000460657 EYA1Q99502 592 aa14.33□□□□□ -0.11
CPNE6-202ENST00000460657 NAT10Q9H0A0 1025 aaKnown RBP14.33□□□□□ -0.11
CPNE6-202ENST00000460657 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.11
CPNE6-202ENST00000460657 XPCQ01831 940 aaPredicted RBP14.33□□□□□ -0.12
CPNE6-202ENST00000460657 SPATA32Q96LK8 384 aa14.33□□□□□ -0.12
CPNE6-202ENST00000460657 HYPKQ9NX55 129 aa14.33□□□□□ -0.12
CPNE6-202ENST00000460657 LRSAM1Q6UWE0 723 aa14.33□□□□□ -0.12
CPNE6-202ENST00000460657 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
CPNE6-202ENST00000460657 GDPD2Q9HCC8 539 aa14.33□□□□□ -0.12
CPNE6-202ENST00000460657 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
CPNE6-202ENST00000460657 SPC24Q8NBT2 197 aa14.33□□□□□ -0.12
CPNE6-202ENST00000460657 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
CPNE6-202ENST00000460657 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
CPNE6-202ENST00000460657 CABP4P57796 275 aa14.32□□□□□ -0.12
CPNE6-202ENST00000460657 ZGPATQ8N5A5 531 aaKnown RBP14.32□□□□□ -0.12
CPNE6-202ENST00000460657 STX6O43752 255 aa14.32□□□□□ -0.12
CPNE6-202ENST00000460657 G2E3Q7L622 706 aa14.32□□□□□ -0.12
CPNE6-202ENST00000460657 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
CPNE6-202ENST00000460657 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
CPNE6-202ENST00000460657 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
CPNE6-202ENST00000460657 USP19O94966 1318 aa14.32□□□□□ -0.12
CPNE6-202ENST00000460657 UQCRHLA0A096LP55 91 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms