RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 INHAP05111 366 aa8.74□□□□□ -1.01
VBP1-202ENST00000460509 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
VBP1-202ENST00000460509 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
VBP1-202ENST00000460509 NLRP3Q96P20 1036 aa8.74□□□□□ -1.01
VBP1-202ENST00000460509 KDF1Q8NAX2 398 aaPredicted RBP8.73□□□□□ -1.01
VBP1-202ENST00000460509 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
VBP1-202ENST00000460509 BMP2P12643 396 aa8.72□□□□□ -1.01
VBP1-202ENST00000460509 TNS4Q8IZW8 715 aa8.72□□□□□ -1.01
VBP1-202ENST00000460509 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
VBP1-202ENST00000460509 AXIN1O15169 862 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 PRMT3O60678 531 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 IL2RAP01589 272 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 PRIMPOLQ96LW4 560 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 TRAIPQ9BWF2 469 aa8.71□□□□□ -1.02
VBP1-202ENST00000460509 POLMQ9NP87 494 aaPredicted RBP8.71□□□□□ -1.02
VBP1-202ENST00000460509 AVPP01185 164 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 BMP1P13497 986 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 CLN3Q13286 438 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 SCARF1Q14162 830 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 TLR1Q15399 786 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 SWI5Q1ZZU3 235 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 INSM2Q96T92 566 aaPredicted RBP8.7□□□□□ -1.02
VBP1-202ENST00000460509 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
VBP1-202ENST00000460509 SMTNP53814 917 aa8.69□□□□□ -1.02
VBP1-202ENST00000460509 CENPCQ03188 943 aa8.69□□□□□ -1.02
VBP1-202ENST00000460509 FAM69CQ0P6D2 419 aa8.69□□□□□ -1.02
VBP1-202ENST00000460509 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
VBP1-202ENST00000460509 CRIPAKQ8N1N5 446 aa8.69□□□□□ -1.02
VBP1-202ENST00000460509 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
VBP1-202ENST00000460509 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
VBP1-202ENST00000460509 A6NJY4 79 aa8.68□□□□□ -1.02
VBP1-202ENST00000460509 M0R2N6 131 aa8.68□□□□□ -1.02
VBP1-202ENST00000460509 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
VBP1-202ENST00000460509 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
VBP1-202ENST00000460509 CTC1Q2NKJ3 1217 aa8.68□□□□□ -1.02
VBP1-202ENST00000460509 SLC27A3Q5K4L6 730 aa8.68□□□□□ -1.02
VBP1-202ENST00000460509 TBCELQ5QJ74 424 aa8.68□□□□□ -1.02
VBP1-202ENST00000460509 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
VBP1-202ENST00000460509 CLP1Q92989 425 aaKnown RBP8.68□□□□□ -1.02
VBP1-202ENST00000460509 ATP2B4P23634 1241 aa8.67□□□□□ -1.02
VBP1-202ENST00000460509 TMEM214Q6NUQ4 689 aaKnown RBP8.67□□□□□ -1.02
VBP1-202ENST00000460509 SCG3Q8WXD2 468 aaKnown RBP8.67□□□□□ -1.02
VBP1-202ENST00000460509 SPINT1O43278 529 aa8.66□□□□□ -1.02
VBP1-202ENST00000460509 CTSOP43234 321 aaPredicted RBP8.66□□□□□ -1.02
VBP1-202ENST00000460509 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
VBP1-202ENST00000460509 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
VBP1-202ENST00000460509 TSPAN10Q9H1Z9 355 aaPredicted RBP8.66□□□□□ -1.02
VBP1-202ENST00000460509 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
VBP1-202ENST00000460509 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
VBP1-202ENST00000460509 SMCPP49901 116 aaPredicted RBP8.65□□□□□ -1.02
VBP1-202ENST00000460509 B4GALNT3Q6L9W6 998 aa8.65□□□□□ -1.02
VBP1-202ENST00000460509 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 PPP1R12BO60237 982 aaPredicted RBP8.64□□□□□ -1.03
VBP1-202ENST00000460509 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 SLC9A9Q8IVB4 645 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 ZFP42Q96MM3 310 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 MKNK1Q9BUB5 465 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 CABP1Q9NZU7 370 aa8.64□□□□□ -1.03
VBP1-202ENST00000460509 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
VBP1-202ENST00000460509 BRD1O95696 1058 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 MTFR1Q15390 333 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 PRICKLE2Q7Z3G6 844 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 VTI1AQ96AJ9 217 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 HRH3Q9Y5N1 445 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 USP3Q9Y6I4 520 aa8.63□□□□□ -1.03
VBP1-202ENST00000460509 TTLL8A6PVC2 850 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
VBP1-202ENST00000460509 CDK2AP1O14519 115 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 SSFA2P28290 1259 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 WEE1P30291 646 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 SCNN1AP37088 669 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 RNF144AP50876 292 aaPredicted RBP8.62□□□□□ -1.03
VBP1-202ENST00000460509 EPHA4P54764 986 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
VBP1-202ENST00000460509 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
VBP1-202ENST00000460509 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
VBP1-202ENST00000460509 ZNF232Q9UNY5 417 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
VBP1-202ENST00000460509 IGFBP4P22692 258 aa8.61□□□□□ -1.03
VBP1-202ENST00000460509 GPC1P35052 558 aa8.61□□□□□ -1.03
VBP1-202ENST00000460509 PHKA2P46019 1235 aa8.61□□□□□ -1.03
VBP1-202ENST00000460509 OCLNQ16625 522 aa8.61□□□□□ -1.03
VBP1-202ENST00000460509 NBPF15Q8N660 670 aa8.61□□□□□ -1.03
VBP1-202ENST00000460509 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
VBP1-202ENST00000460509 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
VBP1-202ENST00000460509 FOXK2Q01167 660 aa8.6□□□□□ -1.03
VBP1-202ENST00000460509 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
VBP1-202ENST00000460509 PPARGC1BQ86YN6 1023 aaKnown RBP8.6□□□□□ -1.03
VBP1-202ENST00000460509 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
VBP1-202ENST00000460509 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
VBP1-202ENST00000460509 C21orf2O43822 256 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 RHOQP17081 205 aa8.59□□□□□ -1.03
VBP1-202ENST00000460509 PSMA6P60900 246 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms