RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
CDHR4-203ENST00000460430 ACSBG1Q96GR2 724 aa13.91□□□□□ -0.18
CDHR4-203ENST00000460430 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
CDHR4-203ENST00000460430 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.18
CDHR4-203ENST00000460430 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
CDHR4-203ENST00000460430 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
CDHR4-203ENST00000460430 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
CDHR4-203ENST00000460430 TSR2Q969E8 191 aaKnown RBP13.9□□□□□ -0.18
CDHR4-203ENST00000460430 SIPA1L3O60292 1781 aaPredicted RBP13.9□□□□□ -0.18
CDHR4-203ENST00000460430 BCL9O00512 1426 aa13.9□□□□□ -0.19
CDHR4-203ENST00000460430 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
CDHR4-203ENST00000460430 FAM196AQ6ZSG2 479 aa13.89□□□□□ -0.19
CDHR4-203ENST00000460430 TTC5Q8N0Z6 440 aa13.89□□□□□ -0.19
CDHR4-203ENST00000460430 MBIPQ9NS73 344 aa13.89□□□□□ -0.19
CDHR4-203ENST00000460430 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
CDHR4-203ENST00000460430 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
CDHR4-203ENST00000460430 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
CDHR4-203ENST00000460430 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
CDHR4-203ENST00000460430 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
CDHR4-203ENST00000460430 KDM3BQ7LBC6 1761 aa13.88□□□□□ -0.19
CDHR4-203ENST00000460430 ITGB4P16144 1822 aa13.87□□□□□ -0.19
CDHR4-203ENST00000460430 PAPPAQ13219 1627 aa13.87□□□□□ -0.19
CDHR4-203ENST00000460430 CHL1O00533 1208 aa13.87□□□□□ -0.19
CDHR4-203ENST00000460430 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
CDHR4-203ENST00000460430 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
CDHR4-203ENST00000460430 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
CDHR4-203ENST00000460430 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
CDHR4-203ENST00000460430 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
CDHR4-203ENST00000460430 PIGBQ92521 554 aa13.85□□□□□ -0.19
CDHR4-203ENST00000460430 KCNQ2O43526 872 aa13.84□□□□□ -0.19
CDHR4-203ENST00000460430 SBF2Q86WG5 1849 aa13.83□□□□□ -0.2
CDHR4-203ENST00000460430 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
CDHR4-203ENST00000460430 FMNL2Q96PY5 1086 aa13.83□□□□□ -0.2
CDHR4-203ENST00000460430 BTAF1O14981 1849 aa13.83□□□□□ -0.2
CDHR4-203ENST00000460430 PALLDQ8WX93 1383 aa13.83□□□□□ -0.2
CDHR4-203ENST00000460430 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 KCNQ3O43525 872 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 TRIM37O94972 964 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 TRMT2AQ8IZ69 625 aaKnown RBP13.82□□□□□ -0.2
CDHR4-203ENST00000460430 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
CDHR4-203ENST00000460430 BCL11BQ9C0K0 894 aaPredicted RBP13.82□□□□□ -0.2
CDHR4-203ENST00000460430 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
CDHR4-203ENST00000460430 EP400Q96L91 3159 aa13.81□□□□□ -0.2
CDHR4-203ENST00000460430 PTCD1O75127 700 aaKnown RBP13.81□□□□□ -0.2
CDHR4-203ENST00000460430 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
CDHR4-203ENST00000460430 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
CDHR4-203ENST00000460430 KRT24Q2M2I5 525 aa13.8□□□□□ -0.2
CDHR4-203ENST00000460430 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
CDHR4-203ENST00000460430 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
CDHR4-203ENST00000460430 ELL2O00472 640 aaPredicted RBP13.79□□□□□ -0.2
CDHR4-203ENST00000460430 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
CDHR4-203ENST00000460430 PTF1AQ7RTS3 328 aa13.79□□□□□ -0.2
CDHR4-203ENST00000460430 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
CDHR4-203ENST00000460430 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
CDHR4-203ENST00000460430 HOXB7P09629 217 aa13.78□□□□□ -0.2
CDHR4-203ENST00000460430 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
CDHR4-203ENST00000460430 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
CDHR4-203ENST00000460430 SOS1Q07889 1333 aaPredicted RBP13.78□□□□□ -0.2
CDHR4-203ENST00000460430 C5P01031 1676 aa13.78□□□□□ -0.2
CDHR4-203ENST00000460430 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
CDHR4-203ENST00000460430 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
CDHR4-203ENST00000460430 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
CDHR4-203ENST00000460430 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
CDHR4-203ENST00000460430 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
CDHR4-203ENST00000460430 LOC102724428A0A0B4J2F2 783 aa13.76□□□□□ -0.21
CDHR4-203ENST00000460430 APBA3O96018 575 aa13.76□□□□□ -0.21
CDHR4-203ENST00000460430 SIK1P57059 783 aa13.76□□□□□ -0.21
CDHR4-203ENST00000460430 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
CDHR4-203ENST00000460430 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
CDHR4-203ENST00000460430 CHMP4AQ9BY43 222 aa13.76□□□□□ -0.21
CDHR4-203ENST00000460430 EIF2S2P20042 333 aaKnown RBP13.75□□□□□ -0.21
CDHR4-203ENST00000460430 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
CDHR4-203ENST00000460430 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
CDHR4-203ENST00000460430 STK31Q9BXU1 1019 aa13.75□□□□□ -0.21
CDHR4-203ENST00000460430 CCNL1Q9UK58 526 aaPredicted RBP13.75□□□□□ -0.21
CDHR4-203ENST00000460430 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
CDHR4-203ENST00000460430 TJP1Q07157 1748 aa13.75□□□□□ -0.21
CDHR4-203ENST00000460430 LY75O60449 1722 aa13.74□□□□□ -0.21
CDHR4-203ENST00000460430 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
CDHR4-203ENST00000460430 VAMP4O75379 141 aa13.74□□□□□ -0.21
CDHR4-203ENST00000460430 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
CDHR4-203ENST00000460430 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
CDHR4-203ENST00000460430 TEX13AQ9BXU3 409 aaPredicted RBP13.74□□□□□ -0.21
CDHR4-203ENST00000460430 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
CDHR4-203ENST00000460430 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
CDHR4-203ENST00000460430 STARD3NLO95772 234 aa13.73□□□□□ -0.21
CDHR4-203ENST00000460430 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
CDHR4-203ENST00000460430 RGPD3A6NKT7 1758 aaPredicted RBP13.73□□□□□ -0.21
CDHR4-203ENST00000460430 RGPD4Q7Z3J3 1758 aa13.73□□□□□ -0.21
CDHR4-203ENST00000460430 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
CDHR4-203ENST00000460430 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
CDHR4-203ENST00000460430 BAG6P46379 1132 aa13.72□□□□□ -0.21
CDHR4-203ENST00000460430 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
CDHR4-203ENST00000460430 SLC4A9Q96Q91 983 aa13.72□□□□□ -0.21
CDHR4-203ENST00000460430 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
CDHR4-203ENST00000460430 RARSP54136 660 aaKnown RBP13.71□□□□□ -0.21
CDHR4-203ENST00000460430 CHPF2Q9P2E5 772 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms