RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 AMPHP49418 695 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 SIK1P57059 783 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 TMF1P82094 1093 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
SCMH1-212ENST00000460215 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
SCMH1-212ENST00000460215 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
SCMH1-212ENST00000460215 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
SCMH1-212ENST00000460215 CD163L1Q9NR16 1453 aa12.18□□□□□ -0.46
SCMH1-212ENST00000460215 GLTPD2A6NH11 291 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
SCMH1-212ENST00000460215 LBX1P52954 281 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 RASSF7Q02833 373 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 ITPK1Q13572 414 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 NBPF6Q5VWK0 638 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 HDGFL2Q7Z4V5 671 aaPredicted RBP12.17□□□□□ -0.46
SCMH1-212ENST00000460215 PIGBQ92521 554 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 NBPF4Q96M43 638 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 PARP3Q9Y6F1 533 aa12.17□□□□□ -0.46
SCMH1-212ENST00000460215 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
SCMH1-212ENST00000460215 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
SCMH1-212ENST00000460215 KDM6AO15550 1401 aaPredicted RBP12.15□□□□□ -0.46
SCMH1-212ENST00000460215 CYP27B1O15528 508 aa12.15□□□□□ -0.46
SCMH1-212ENST00000460215 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
SCMH1-212ENST00000460215 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
SCMH1-212ENST00000460215 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
SCMH1-212ENST00000460215 TMC1Q8TDI8 760 aa12.15□□□□□ -0.46
SCMH1-212ENST00000460215 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
SCMH1-212ENST00000460215 ITGB4P16144 1822 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
SCMH1-212ENST00000460215 CCDC85CA6NKD9 419 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 GYS1P13807 737 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 LMNB1P20700 586 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 CHRNA5P30532 468 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 SBF1O95248 1867 aa12.14□□□□□ -0.47
SCMH1-212ENST00000460215 ADRA2BP18089 450 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 FBLN1P23142 703 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 RFC4P35249 363 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 RGS19P49795 217 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
SCMH1-212ENST00000460215 COG3Q96JB2 828 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
SCMH1-212ENST00000460215 HSPA8P11142 646 aaKnown RBP12.11□□□□□ -0.47
SCMH1-212ENST00000460215 VEGFBP49765 207 aa12.11□□□□□ -0.47
SCMH1-212ENST00000460215 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
SCMH1-212ENST00000460215 POTECB2RU33 542 aa12.1□□□□□ -0.47
SCMH1-212ENST00000460215 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-212ENST00000460215 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
SCMH1-212ENST00000460215 ROCK2O75116 1388 aaKnown RBP12.09□□□□□ -0.47
SCMH1-212ENST00000460215 DDR1Q08345 913 aa12.09□□□□□ -0.47
SCMH1-212ENST00000460215 RRS1Q15050 365 aaKnown RBP12.09□□□□□ -0.47
SCMH1-212ENST00000460215 KDRP35968 1356 aa12.08□□□□□ -0.48
SCMH1-212ENST00000460215 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
SCMH1-212ENST00000460215 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
SCMH1-212ENST00000460215 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
SCMH1-212ENST00000460215 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
SCMH1-212ENST00000460215 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
SCMH1-212ENST00000460215 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
SCMH1-212ENST00000460215 ATG3Q9NT62 314 aa12.07□□□□□ -0.48
SCMH1-212ENST00000460215 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
SCMH1-212ENST00000460215 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
SCMH1-212ENST00000460215 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
SCMH1-212ENST00000460215 PASKQ96RG2 1323 aa12.06□□□□□ -0.48
SCMH1-212ENST00000460215 TMEM88BA6NKF7 163 aa12.05□□□□□ -0.48
SCMH1-212ENST00000460215 FKBP8Q14318 412 aa12.05□□□□□ -0.48
SCMH1-212ENST00000460215 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
SCMH1-212ENST00000460215 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
SCMH1-212ENST00000460215 SRP68Q9UHB9 627 aaKnown RBP12.05□□□□□ -0.48
SCMH1-212ENST00000460215 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
SCMH1-212ENST00000460215 NFKBIEO00221 500 aa12.04□□□□□ -0.48
SCMH1-212ENST00000460215 MAP2K1Q02750 393 aaPredicted RBP12.04□□□□□ -0.48
SCMH1-212ENST00000460215 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
SCMH1-212ENST00000460215 SLC4A9Q96Q91 983 aa12.04□□□□□ -0.48
SCMH1-212ENST00000460215 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
SCMH1-212ENST00000460215 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
SCMH1-212ENST00000460215 INSRP06213 1382 aa12.04□□□□□ -0.48
SCMH1-212ENST00000460215 VIRMAQ69YN4 1812 aaKnown RBP12.03□□□□□ -0.48
SCMH1-212ENST00000460215 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
SCMH1-212ENST00000460215 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
SCMH1-212ENST00000460215 LDHDQ86WU2 507 aa12.02□□□□□ -0.49
SCMH1-212ENST00000460215 TTLL6Q8N841 843 aa12.02□□□□□ -0.49
SCMH1-212ENST00000460215 COL5A3P25940 1745 aaPredicted RBP12.02□□□□□ -0.49
SCMH1-212ENST00000460215 FLT4P35916 1363 aa12.02□□□□□ -0.49
SCMH1-212ENST00000460215 TNRC18O15417 2968 aaPredicted RBP12.01□□□□□ -0.49
SCMH1-212ENST00000460215 RASSF10A6NK89 507 aa12.01□□□□□ -0.49
SCMH1-212ENST00000460215 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
SCMH1-212ENST00000460215 DDNO94850 711 aaPredicted RBP12□□□□□ -0.49
SCMH1-212ENST00000460215 DEFB115Q30KQ5 88 aa12□□□□□ -0.49
SCMH1-212ENST00000460215 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
SCMH1-212ENST00000460215 WDR33Q9C0J8 1336 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms