RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TAF7Q15545 349 aaPredicted RBP22.36■■□□□ 1.17
HPS3-202ENST00000460120 RILPL2Q969X0 211 aa22.36■■□□□ 1.17
HPS3-202ENST00000460120 DDX11L8A8MPP1 907 aa22.35■■□□□ 1.17
HPS3-202ENST00000460120 PDE1AP54750 535 aa22.35■■□□□ 1.17
HPS3-202ENST00000460120 FMN2Q9NZ56 1722 aa22.35■■□□□ 1.17
HPS3-202ENST00000460120 XRCC6P12956 609 aaKnown RBP eCLIP22.35■■□□□ 1.17
HPS3-202ENST00000460120 NBPF6Q5VWK0 638 aa22.35■■□□□ 1.17
HPS3-202ENST00000460120 NBPF4Q96M43 638 aa22.35■■□□□ 1.17
HPS3-202ENST00000460120 IL1RAPL2Q9NP60 686 aa22.35■■□□□ 1.17
HPS3-202ENST00000460120 TRIM6-TRIM34B2RNG4 842 aa22.34■■□□□ 1.17
HPS3-202ENST00000460120 RAB3GAP1Q15042 981 aa22.34■■□□□ 1.17
HPS3-202ENST00000460120 L1TD1Q5T7N2 865 aaKnown RBP22.34■■□□□ 1.17
HPS3-202ENST00000460120 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.34■■□□□ 1.17
HPS3-202ENST00000460120 KCNQ3O43525 872 aa22.33■■□□□ 1.17
HPS3-202ENST00000460120 NOL8Q76FK4 1167 aaKnown RBP22.33■■□□□ 1.17
HPS3-202ENST00000460120 GBP4Q96PP9 640 aa22.33■■□□□ 1.16
HPS3-202ENST00000460120 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
HPS3-202ENST00000460120 RABEP1Q15276 862 aa22.32■■□□□ 1.16
HPS3-202ENST00000460120 LRRCC1Q9C099 1032 aa22.32■■□□□ 1.16
HPS3-202ENST00000460120 MAP4K4O95819 1239 aaPredicted RBP22.31■■□□□ 1.16
HPS3-202ENST00000460120 FER1L4A9Z1Z3 1794 aa22.31■■□□□ 1.16
HPS3-202ENST00000460120 PKP1Q13835 747 aa22.3■■□□□ 1.16
HPS3-202ENST00000460120 MPRIPQ6WCQ1 1025 aa22.3■■□□□ 1.16
HPS3-202ENST00000460120 GNAI3P08754 354 aa22.3■■□□□ 1.16
HPS3-202ENST00000460120 FOXD4L5Q5VV16 416 aaPredicted RBP22.3■■□□□ 1.16
HPS3-202ENST00000460120 FOXD4L4Q8WXT5 416 aaPredicted RBP22.3■■□□□ 1.16
HPS3-202ENST00000460120 UBTFL1P0CB47 393 aaPredicted RBP22.29■■□□□ 1.16
HPS3-202ENST00000460120 NUTM1Q86Y26 1132 aa22.29■■□□□ 1.16
HPS3-202ENST00000460120 CIZ1Q9ULV3 898 aaPredicted RBP22.29■■□□□ 1.16
HPS3-202ENST00000460120 ERC2O15083 957 aa22.29■■□□□ 1.16
HPS3-202ENST00000460120 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
HPS3-202ENST00000460120 ZGPATQ8N5A5 531 aaKnown RBP22.29■■□□□ 1.16
HPS3-202ENST00000460120 USP44Q9H0E7 712 aa22.29■■□□□ 1.16
HPS3-202ENST00000460120 MX1P20591 662 aa22.28■■□□□ 1.16
HPS3-202ENST00000460120 UBE2Q2Q8WVN8 375 aa22.28■■□□□ 1.16
HPS3-202ENST00000460120 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
HPS3-202ENST00000460120 ORAI2Q96SN7 254 aa22.28■■□□□ 1.16
HPS3-202ENST00000460120 REC8O95072 547 aa22.27■■□□□ 1.16
HPS3-202ENST00000460120 ATP8B2P98198 1209 aa22.27■■□□□ 1.16
HPS3-202ENST00000460120 ANKLE2Q86XL3 938 aa22.27■■□□□ 1.16
HPS3-202ENST00000460120 UNC5CLQ8IV45 518 aa22.27■■□□□ 1.16
HPS3-202ENST00000460120 CHAMP1Q96JM3 812 aa22.27■■□□□ 1.16
HPS3-202ENST00000460120 ZNF530Q6P9A1 599 aaPredicted RBP22.26■■□□□ 1.15
HPS3-202ENST00000460120 ANKARQ7Z5J8 1434 aa22.26■■□□□ 1.15
HPS3-202ENST00000460120 ANO2Q9NQ90 1003 aa22.26■■□□□ 1.15
HPS3-202ENST00000460120 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
HPS3-202ENST00000460120 IP6K1Q92551 441 aa22.25■■□□□ 1.15
HPS3-202ENST00000460120 FSD2A1L4K1 749 aa22.25■■□□□ 1.15
HPS3-202ENST00000460120 NCLP19338 710 aaKnown RBP22.25■■□□□ 1.15
HPS3-202ENST00000460120 SURF6O75683 361 aaKnown RBP22.24■■□□□ 1.15
HPS3-202ENST00000460120 TEFQ10587 303 aa22.24■■□□□ 1.15
HPS3-202ENST00000460120 MCTP1Q6DN14 999 aa22.24■■□□□ 1.15
HPS3-202ENST00000460120 ST18O60284 1047 aa22.24■■□□□ 1.15
HPS3-202ENST00000460120 NBPF7P0C2Y1 421 aaPredicted RBP22.24■■□□□ 1.15
HPS3-202ENST00000460120 NEK4P51957 841 aa22.23■■□□□ 1.15
HPS3-202ENST00000460120 PPP1R42Q7Z4L9 355 aa22.23■■□□□ 1.15
HPS3-202ENST00000460120 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
HPS3-202ENST00000460120 PI4KAP2A4QPH2 592 aa22.23■■□□□ 1.15
HPS3-202ENST00000460120 PI4KAP1Q8N8J0 262 aa22.23■■□□□ 1.15
HPS3-202ENST00000460120 BTBD11A6QL63 1104 aa22.22■■□□□ 1.15
HPS3-202ENST00000460120 GAS2L3Q86XJ1 694 aa22.22■■□□□ 1.15
HPS3-202ENST00000460120 SRCIN1Q9C0H9 1055 aa22.22■■□□□ 1.15
HPS3-202ENST00000460120 PALD1Q9ULE6 856 aa22.22■■□□□ 1.15
HPS3-202ENST00000460120 SRGAP3O43295 1099 aa22.22■■□□□ 1.15
HPS3-202ENST00000460120 BAG4O95429 457 aaKnown RBP22.22■■□□□ 1.15
HPS3-202ENST00000460120 EIF4A1P60842 406 aaKnown RBP22.22■■□□□ 1.15
HPS3-202ENST00000460120 AK9Q5TCS8 1911 aa22.21■■□□□ 1.15
HPS3-202ENST00000460120 PRAMEF22A3QJZ6 481 aa22.21■■□□□ 1.15
HPS3-202ENST00000460120 ESYT1Q9BSJ8 1104 aa22.21■■□□□ 1.15
HPS3-202ENST00000460120 GRPEL1Q9HAV7 217 aa22.21■■□□□ 1.15
HPS3-202ENST00000460120 IBTKQ9P2D0 1353 aaPredicted RBP22.21■■□□□ 1.15
HPS3-202ENST00000460120 OSBPL3Q9H4L5 887 aa22.2■■□□□ 1.14
HPS3-202ENST00000460120 DDX49Q9Y6V7 483 aaKnown RBP22.2■■□□□ 1.14
HPS3-202ENST00000460120 RRAGDQ9NQL2 400 aaPredicted RBP22.2■■□□□ 1.14
HPS3-202ENST00000460120 GOLGA6L22H0YM25 854 aa22.19■■□□□ 1.14
HPS3-202ENST00000460120 IL25Q9H293 177 aa22.19■■□□□ 1.14
HPS3-202ENST00000460120 UPF3BQ9BZI7 483 aaKnown RBP22.18■■□□□ 1.14
HPS3-202ENST00000460120 SALL3Q9BXA9 1300 aa22.18■■□□□ 1.14
HPS3-202ENST00000460120 CHMLP26374 656 aa22.18■■□□□ 1.14
HPS3-202ENST00000460120 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 GCP02774 474 aa22.17■■□□□ 1.14
HPS3-202ENST00000460120 EIF5BO60841 1220 aaKnown RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 OS9Q13438 667 aaPredicted RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 FOXD4L6Q3SYB3 417 aaPredicted RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 FOXD4L3Q6VB84 417 aaPredicted RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 SOS1Q07889 1333 aaPredicted RBP22.17■■□□□ 1.14
HPS3-202ENST00000460120 MRE11P49959 708 aa22.16■■□□□ 1.14
HPS3-202ENST00000460120 PROSER3Q2NL68 480 aa22.16■■□□□ 1.14
HPS3-202ENST00000460120 FAM43AQ8N2R8 423 aa22.16■■□□□ 1.14
HPS3-202ENST00000460120 ZC3H6P61129 1189 aaKnown RBP22.16■■□□□ 1.14
HPS3-202ENST00000460120 C1orf141Q5JVX7 400 aa22.16■■□□□ 1.14
HPS3-202ENST00000460120 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
HPS3-202ENST00000460120 AIMP1Q12904 312 aaKnown RBP22.15■■□□□ 1.14
HPS3-202ENST00000460120 ANKRD24Q8TF21 1146 aa22.15■■□□□ 1.14
HPS3-202ENST00000460120 PLEKHO1Q53GL0 409 aaPredicted RBP22.15■■□□□ 1.14
HPS3-202ENST00000460120 AXIN2Q9Y2T1 843 aa22.15■■□□□ 1.14
HPS3-202ENST00000460120 LRRC37A3O60309 1634 aa22.14■■□□□ 1.14
HPS3-202ENST00000460120 KCNH5Q8NCM2 988 aa22.14■■□□□ 1.13
HPS3-202ENST00000460120 RHPN1Q8TCX5 695 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms