RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
HDLBP-228ENST00000459788 KCNQ4P56696 695 aa13.53□□□□□ -0.24
HDLBP-228ENST00000459788 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
HDLBP-228ENST00000459788 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-228ENST00000459788 AK7Q96M32 723 aa13.53□□□□□ -0.24
HDLBP-228ENST00000459788 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
HDLBP-228ENST00000459788 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
HDLBP-228ENST00000459788 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
HDLBP-228ENST00000459788 ASAP1Q9ULH1 1129 aa13.52□□□□□ -0.25
HDLBP-228ENST00000459788 COL3A1P02461 1466 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-228ENST00000459788 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
HDLBP-228ENST00000459788 MRC1P22897 1456 aa13.51□□□□□ -0.25
HDLBP-228ENST00000459788 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
HDLBP-228ENST00000459788 CABP4P57796 275 aa13.51□□□□□ -0.25
HDLBP-228ENST00000459788 CC2D1BQ5T0F9 858 aaKnown RBP13.51□□□□□ -0.25
HDLBP-228ENST00000459788 ADRA2BP18089 450 aa13.5□□□□□ -0.25
HDLBP-228ENST00000459788 CNTNAP4Q9C0A0 1308 aa13.49□□□□□ -0.25
HDLBP-228ENST00000459788 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
HDLBP-228ENST00000459788 KIF13BQ9NQT8 1826 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 TJP1Q07157 1748 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
HDLBP-228ENST00000459788 MSH5O43196 834 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 ITPK1Q13572 414 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
HDLBP-228ENST00000459788 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-228ENST00000459788 UTRNP46939 3433 aa13.46□□□□□ -0.25
HDLBP-228ENST00000459788 YY1P25490 414 aa13.46□□□□□ -0.25
HDLBP-228ENST00000459788 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
HDLBP-228ENST00000459788 SLC52A2Q9HAB3 445 aa13.46□□□□□ -0.25
HDLBP-228ENST00000459788 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
HDLBP-228ENST00000459788 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
HDLBP-228ENST00000459788 GNPATO15228 680 aa13.45□□□□□ -0.26
HDLBP-228ENST00000459788 RPS6KA4O75676 772 aa13.45□□□□□ -0.26
HDLBP-228ENST00000459788 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
HDLBP-228ENST00000459788 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
HDLBP-228ENST00000459788 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
HDLBP-228ENST00000459788 RNMTO43148 476 aaKnown RBP13.44□□□□□ -0.26
HDLBP-228ENST00000459788 HMOX1P09601 288 aa13.44□□□□□ -0.26
HDLBP-228ENST00000459788 MTHFSDQ2M296 383 aaKnown RBP13.44□□□□□ -0.26
HDLBP-228ENST00000459788 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
HDLBP-228ENST00000459788 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
HDLBP-228ENST00000459788 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
HDLBP-228ENST00000459788 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
HDLBP-228ENST00000459788 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
HDLBP-228ENST00000459788 PPP2R1AP30153 589 aa13.42□□□□□ -0.26
HDLBP-228ENST00000459788 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
HDLBP-228ENST00000459788 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
HDLBP-228ENST00000459788 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
HDLBP-228ENST00000459788 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
HDLBP-228ENST00000459788 FCHSD2O94868 740 aa13.41□□□□□ -0.26
HDLBP-228ENST00000459788 PHF14O94880 888 aa13.41□□□□□ -0.26
HDLBP-228ENST00000459788 GPR162Q16538 588 aa13.41□□□□□ -0.26
HDLBP-228ENST00000459788 GOLGB1Q14789 3259 aaKnown RBP13.41□□□□□ -0.26
HDLBP-228ENST00000459788 RFC4P35249 363 aa13.4□□□□□ -0.26
HDLBP-228ENST00000459788 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
HDLBP-228ENST00000459788 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
HDLBP-228ENST00000459788 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
HDLBP-228ENST00000459788 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
HDLBP-228ENST00000459788 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
HDLBP-228ENST00000459788 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
HDLBP-228ENST00000459788 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
HDLBP-228ENST00000459788 TEX13AQ9BXU3 409 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-228ENST00000459788 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
HDLBP-228ENST00000459788 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
HDLBP-228ENST00000459788 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
HDLBP-228ENST00000459788 TEFQ10587 303 aa13.38□□□□□ -0.27
HDLBP-228ENST00000459788 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
HDLBP-228ENST00000459788 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
HDLBP-228ENST00000459788 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
HDLBP-228ENST00000459788 GYS1P13807 737 aa13.37□□□□□ -0.27
HDLBP-228ENST00000459788 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
HDLBP-228ENST00000459788 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
HDLBP-228ENST00000459788 ARFGEF1Q9Y6D6 1849 aa13.36□□□□□ -0.27
HDLBP-228ENST00000459788 MMP10P09238 476 aa13.36□□□□□ -0.27
HDLBP-228ENST00000459788 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-228ENST00000459788 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
HDLBP-228ENST00000459788 TGFB2P61812 414 aa13.36□□□□□ -0.27
HDLBP-228ENST00000459788 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
HDLBP-228ENST00000459788 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
HDLBP-228ENST00000459788 PNNQ9H307 717 aaKnown RBP13.36□□□□□ -0.27
HDLBP-228ENST00000459788 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
HDLBP-228ENST00000459788 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
HDLBP-228ENST00000459788 STARD3NLO95772 234 aa13.35□□□□□ -0.27
HDLBP-228ENST00000459788 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-228ENST00000459788 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDLBP-228ENST00000459788 RALBP1Q15311 655 aa13.35□□□□□ -0.27
HDLBP-228ENST00000459788 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
HDLBP-228ENST00000459788 NRXN2Q9P2S2 1712 aa13.35□□□□□ -0.27
HDLBP-228ENST00000459788 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-228ENST00000459788 NEFMP07197 916 aa13.34□□□□□ -0.27
HDLBP-228ENST00000459788 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
HDLBP-228ENST00000459788 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
HDLBP-228ENST00000459788 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
HDLBP-228ENST00000459788 N4BP2Q86UW6 1770 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-228ENST00000459788 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
HDLBP-228ENST00000459788 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
HDLBP-228ENST00000459788 A0A087WZG4 1122 aa13.33□□□□□ -0.28
HDLBP-228ENST00000459788 ZPR1O75312 459 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms