RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 CCDC82Q8N4S0 544 aa6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 TPCN2Q8NHX9 752 aa6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 ZSCAN10Q96SZ4 725 aaPredicted RBP6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 KIAA1024Q9UPX6 916 aa6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 RBM19Q9Y4C8 960 aaKnown RBP6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 FAM196BA6NMK8 535 aa6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 SPATA31C2B4DYI2 1134 aa6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 GTF2E1P29083 439 aaPredicted RBP6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 PTK7Q13308 1070 aa6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 FHDC1Q9C0D6 1143 aaPredicted RBP6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 ZNF358Q9NW07 568 aa6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 SERTAD1Q9UHV2 236 aa6.02□□□□□ -1.45
SCARNA18-201ENST00000459004 A6NJY4 79 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L15C9J2P7 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L10C9JJH3 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L13C9JLJ4 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L12C9JPN9 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L11C9JVI0 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L21D6R901 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L18D6R9N7 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L22D6RA61 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L17D6RBQ6 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L19D6RCP7 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L20D6RJB6 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 M0R2N6 131 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 DKK1O94907 266 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 SRPK2P78362 688 aaKnown RBP6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 PTSQ03393 145 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 USP17L24Q0WX57 530 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 MTFR1Q15390 333 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 TLR1Q15399 786 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 CRTC2Q53ET0 693 aaPredicted RBP6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 CDCA8Q53HL2 280 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 WDR44Q5JSH3 913 aa6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 TMEM214Q6NUQ4 689 aaKnown RBP6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 PPARGC1BQ86YN6 1023 aaKnown RBP6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 ZNF594Q96JF6 807 aaPredicted RBP6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 NXF1Q9UBU9 619 aaKnown RBP6.01□□□□□ -1.45
SCARNA18-201ENST00000459004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6□□□□□ -1.45
SCARNA18-201ENST00000459004 SLC35F4A4IF30 521 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 CDK2AP1O14519 115 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 RHOQP17081 205 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 SEC13P55735 322 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 POU4F2Q12837 409 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 GNASQ5JWF2 1037 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 NBPF10Q6P3W6 841 aaKnown RBP6□□□□□ -1.45
SCARNA18-201ENST00000459004 TAS1R3Q7RTX0 852 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 ANKMY2Q8IV38 441 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 NBPF15Q8N660 670 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 PBXIP1Q96AQ6 731 aa6□□□□□ -1.45
SCARNA18-201ENST00000459004 SFI1A8K8P3 1242 aa5.99□□□□□ -1.45
SCARNA18-201ENST00000459004 TERTO14746 1132 aaKnown RBP5.99□□□□□ -1.45
SCARNA18-201ENST00000459004 DPYDQ12882 1025 aa5.99□□□□□ -1.45
SCARNA18-201ENST00000459004 RHBDD1Q8TEB9 315 aa5.99□□□□□ -1.45
SCARNA18-201ENST00000459004 ZNF775Q96BV0 537 aaPredicted RBP5.99□□□□□ -1.45
SCARNA18-201ENST00000459004 PPP1R15AO75807 674 aaPredicted RBP5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 ATG7O95352 703 aa5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 ELOAQ14241 798 aaKnown RBP5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 TNS4Q8IZW8 715 aa5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 CCDC155Q8N6L0 562 aa5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 FAM200AQ8TCP9 573 aa5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 ARXQ96QS3 562 aa5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 NIFKQ9BYG3 293 aaKnown RBP5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 TIMMDC1Q9NPL8 285 aa5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 SCHIP1Q9P0W5 487 aaPredicted RBP5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 IQSEC3Q9UPP2 1182 aaPredicted RBP5.98□□□□□ -1.45
SCARNA18-201ENST00000459004 PPFIA3O75145 1194 aa5.97□□□□□ -1.45
SCARNA18-201ENST00000459004 EPHA4P54764 986 aa5.97□□□□□ -1.45
SCARNA18-201ENST00000459004 C4orf17Q53FE4 359 aa5.97□□□□□ -1.45
SCARNA18-201ENST00000459004 SLC16A10Q8TF71 515 aa5.97□□□□□ -1.45
SCARNA18-201ENST00000459004 NOVA2Q9UNW9 492 aaKnown RBP5.97□□□□□ -1.45
SCARNA18-201ENST00000459004 DYRK1BQ9Y463 629 aa5.97□□□□□ -1.45
SCARNA18-201ENST00000459004 SENP3-EIF4A1A0A087X0R7 540 aa5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 H3BM21 787 aa5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 PHKA2P46019 1235 aa5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 FOXK2Q01167 660 aa5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 TSEN2Q8NCE0 465 aaKnown RBP5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 HINFPQ9BQA5 517 aa5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 ACIN1Q9UKV3 1341 aaKnown RBP5.96□□□□□ -1.46
SCARNA18-201ENST00000459004 A0A1B0GTH6 734 aa5.95□□□□□ -1.46
SCARNA18-201ENST00000459004 ZNF295-AS1Q8N0V1 137 aa5.95□□□□□ -1.46
SCARNA18-201ENST00000459004 GAS2L2Q8NHY3 880 aa5.95□□□□□ -1.46
SCARNA18-201ENST00000459004 ARID3AQ99856 593 aa5.95□□□□□ -1.46
SCARNA18-201ENST00000459004 CABP1Q9NZU7 370 aa5.95□□□□□ -1.46
SCARNA18-201ENST00000459004 USP3Q9Y6I4 520 aa5.95□□□□□ -1.46
SCARNA18-201ENST00000459004 F11P03951 625 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 ITGA6P23229 1130 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 NOS2P35228 1153 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 PLA2G4AP47712 749 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 VEGFBP49765 207 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 NFX1Q12986 1120 aaKnown RBP5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 TEAD4Q15561 434 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 SLC9A9Q8IVB4 645 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 GMCL1Q96IK5 515 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 GAS2L1Q99501 681 aaPredicted RBP5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 TSPAN10Q9H1Z9 355 aaPredicted RBP5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 ZMIZ1Q9ULJ6 1067 aa5.94□□□□□ -1.46
SCARNA18-201ENST00000459004 CHMP3Q9Y3E7 222 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms