RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 FKBP5Q13451 457 aaPredicted RBP25.43■■□□□ 1.66
CRAT-207ENST00000458362 CCDC30Q5VVM6 783 aa25.43■■□□□ 1.66
CRAT-207ENST00000458362 LTV1Q96GA3 475 aaPredicted RBP25.43■■□□□ 1.66
CRAT-207ENST00000458362 USP54Q70EL1 1684 aa25.43■■□□□ 1.66
CRAT-207ENST00000458362 MAP3K5Q99683 1374 aa25.43■■□□□ 1.66
CRAT-207ENST00000458362 TSHZ3Q63HK5 1081 aa25.43■■□□□ 1.66
CRAT-207ENST00000458362 CLEC17AQ6ZS10 378 aa25.43■■□□□ 1.66
CRAT-207ENST00000458362 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.43■■□□□ 1.66
CRAT-207ENST00000458362 SALL3Q9BXA9 1300 aa25.42■■□□□ 1.66
CRAT-207ENST00000458362 SKOR2Q2VWA4 1001 aaPredicted RBP25.42■■□□□ 1.66
CRAT-207ENST00000458362 GAS2L3Q86XJ1 694 aa25.42■■□□□ 1.66
CRAT-207ENST00000458362 PNMA6EA0A0J9YXQ4 647 aa25.42■■□□□ 1.66
CRAT-207ENST00000458362 ERC2O15083 957 aa25.42■■□□□ 1.66
CRAT-207ENST00000458362 REC8O95072 547 aa25.4■■□□□ 1.66
CRAT-207ENST00000458362 BAG4O95429 457 aaKnown RBP25.4■■□□□ 1.66
CRAT-207ENST00000458362 CACNA1FO60840 1977 aa25.4■■□□□ 1.66
CRAT-207ENST00000458362 N4BP2Q86UW6 1770 aaPredicted RBP25.4■■□□□ 1.66
CRAT-207ENST00000458362 PTMSP20962 102 aa25.4■■□□□ 1.66
CRAT-207ENST00000458362 USHBP1Q8N6Y0 703 aa25.39■■□□□ 1.66
CRAT-207ENST00000458362 ABTB2Q8N961 1025 aa25.39■■□□□ 1.66
CRAT-207ENST00000458362 GNAI3P08754 354 aa25.39■■□□□ 1.65
CRAT-207ENST00000458362 ATP8B2P98198 1209 aa25.39■■□□□ 1.65
CRAT-207ENST00000458362 TAF7Q15545 349 aaPredicted RBP25.38■■□□□ 1.65
CRAT-207ENST00000458362 LRRCC1Q9C099 1032 aa25.38■■□□□ 1.65
CRAT-207ENST00000458362 ISY1Q9ULR0 285 aaKnown RBP25.38■■□□□ 1.65
CRAT-207ENST00000458362 CYP2E1P05181 493 aaPredicted RBP25.37■■□□□ 1.65
CRAT-207ENST00000458362 PKP1Q13835 747 aa25.37■■□□□ 1.65
CRAT-207ENST00000458362 LRRFIP2Q9Y608 721 aaKnown RBP25.37■■□□□ 1.65
CRAT-207ENST00000458362 IBTKQ9P2D0 1353 aaPredicted RBP25.36■■□□□ 1.65
CRAT-207ENST00000458362 LTN1O94822 1766 aa25.35■■□□□ 1.65
CRAT-207ENST00000458362 ST18O60284 1047 aa25.35■■□□□ 1.65
CRAT-207ENST00000458362 ZGPATQ8N5A5 531 aaKnown RBP25.35■■□□□ 1.65
CRAT-207ENST00000458362 MX1P20591 662 aa25.34■■□□□ 1.65
CRAT-207ENST00000458362 USP44Q9H0E7 712 aa25.34■■□□□ 1.65
CRAT-207ENST00000458362 NUCB2P80303 420 aa25.33■■□□□ 1.65
CRAT-207ENST00000458362 SOS1Q07889 1333 aaPredicted RBP25.33■■□□□ 1.65
CRAT-207ENST00000458362 PXDNLA1KZ92 1463 aa25.33■■□□□ 1.64
CRAT-207ENST00000458362 GOLGA6L22H0YM25 854 aa25.33■■□□□ 1.64
CRAT-207ENST00000458362 C14orf37Q86TY3 774 aa25.33■■□□□ 1.64
CRAT-207ENST00000458362 ESYT1Q9BSJ8 1104 aa25.33■■□□□ 1.64
CRAT-207ENST00000458362 BABAM1Q9NWV8 329 aa25.33■■□□□ 1.64
CRAT-207ENST00000458362 PHAXQ9H814 394 aaKnown RBP25.32■■□□□ 1.64
CRAT-207ENST00000458362 HDGFL1Q5TGJ6 251 aa25.3■■□□□ 1.64
CRAT-207ENST00000458362 MCTP1Q6DN14 999 aa25.3■■□□□ 1.64
CRAT-207ENST00000458362 KLHL40Q2TBA0 621 aa25.3■■□□□ 1.64
CRAT-207ENST00000458362 CWC22Q9HCG8 908 aaKnown RBP25.3■■□□□ 1.64
CRAT-207ENST00000458362 STAP2Q9UGK3 403 aa25.29■■□□□ 1.64
CRAT-207ENST00000458362 ZDHHC9Q9Y397 364 aa25.29■■□□□ 1.64
CRAT-207ENST00000458362 DDX49Q9Y6V7 483 aaKnown RBP25.29■■□□□ 1.64
CRAT-207ENST00000458362 SETD1BQ9UPS6 1966 aaKnown RBP25.29■■□□□ 1.64
CRAT-207ENST00000458362 CHMLP26374 656 aa25.29■■□□□ 1.64
CRAT-207ENST00000458362 UBTFL1P0CB47 393 aaPredicted RBP25.28■■□□□ 1.64
CRAT-207ENST00000458362 UNC5CLQ8IV45 518 aa25.28■■□□□ 1.64
CRAT-207ENST00000458362 PHF8Q9UPP1 1060 aa25.28■■□□□ 1.64
CRAT-207ENST00000458362 CEMIPQ8WUJ3 1361 aa25.28■■□□□ 1.64
CRAT-207ENST00000458362 RILPL2Q969X0 211 aa25.28■■□□□ 1.64
CRAT-207ENST00000458362 PALD1Q9ULE6 856 aa25.27■■□□□ 1.64
CRAT-207ENST00000458362 NFAT5O94916 1531 aa25.27■■□□□ 1.64
CRAT-207ENST00000458362 TRIM6-TRIM34B2RNG4 842 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 NBPF6Q5VWK0 638 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 IP6K1Q92551 441 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 RBM33Q96EV2 1170 aaKnown RBP25.26■■□□□ 1.63
CRAT-207ENST00000458362 NBPF4Q96M43 638 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 LGR6Q9HBX8 967 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 LMBRD1Q9NUN5 540 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 MED1Q15648 1581 aaPredicted RBP25.26■■□□□ 1.63
CRAT-207ENST00000458362 NEK4P51957 841 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 RGPD2P0DJD1 1756 aa25.26■■□□□ 1.63
CRAT-207ENST00000458362 SSH3Q8TE77 659 aa25.25■■□□□ 1.63
CRAT-207ENST00000458362 IL1RAPL2Q9NP60 686 aa25.25■■□□□ 1.63
CRAT-207ENST00000458362 EIF2S2P20042 333 aaKnown RBP25.24■■□□□ 1.63
CRAT-207ENST00000458362 KDM3BQ7LBC6 1761 aa25.24■■□□□ 1.63
CRAT-207ENST00000458362 EIF4A1P60842 406 aaKnown RBP25.24■■□□□ 1.63
CRAT-207ENST00000458362 CHD2O14647 1828 aaKnown RBP25.23■■□□□ 1.63
CRAT-207ENST00000458362 TMX3Q96JJ7 454 aa25.23■■□□□ 1.63
CRAT-207ENST00000458362 SRCIN1Q9C0H9 1055 aa25.23■■□□□ 1.63
CRAT-207ENST00000458362 KCNQ3O43525 872 aa25.23■■□□□ 1.63
CRAT-207ENST00000458362 PPP1R42Q7Z4L9 355 aa25.23■■□□□ 1.63
CRAT-207ENST00000458362 NUTM1Q86Y26 1132 aa25.23■■□□□ 1.63
CRAT-207ENST00000458362 ANO2Q9NQ90 1003 aa25.23■■□□□ 1.63
CRAT-207ENST00000458362 POLA2Q14181 598 aa25.22■■□□□ 1.63
CRAT-207ENST00000458362 CHAMP1Q96JM3 812 aa25.22■■□□□ 1.63
CRAT-207ENST00000458362 IL25Q9H293 177 aa25.21■■□□□ 1.63
CRAT-207ENST00000458362 CHPF2Q9P2E5 772 aa25.21■■□□□ 1.63
CRAT-207ENST00000458362 AOX1Q06278 1338 aa25.21■■□□□ 1.63
CRAT-207ENST00000458362 ZBTB7CA1YPR0 619 aa25.2■■□□□ 1.63
CRAT-207ENST00000458362 SURF6O75683 361 aaKnown RBP25.19■■□□□ 1.62
CRAT-207ENST00000458362 MCCP23508 829 aa25.19■■□□□ 1.62
CRAT-207ENST00000458362 ERBB4Q15303 1308 aa25.19■■□□□ 1.62
CRAT-207ENST00000458362 LMO7Q8WWI1 1683 aa25.19■■□□□ 1.62
CRAT-207ENST00000458362 NBPF7P0C2Y1 421 aaPredicted RBP25.19■■□□□ 1.62
CRAT-207ENST00000458362 NCLP19338 710 aaKnown RBP25.19■■□□□ 1.62
CRAT-207ENST00000458362 CAVIN1Q6NZI2 390 aaKnown RBP25.19■■□□□ 1.62
CRAT-207ENST00000458362 LRRC59Q96AG4 307 aaKnown RBP25.19■■□□□ 1.62
CRAT-207ENST00000458362 CLCN1P35523 988 aa25.18■■□□□ 1.62
CRAT-207ENST00000458362 PRPF40AO75400 957 aaKnown RBP25.17■■□□□ 1.62
CRAT-207ENST00000458362 ANXA1P04083 346 aa25.17■■□□□ 1.62
CRAT-207ENST00000458362 RAB11FIP3O75154 756 aa25.17■■□□□ 1.62
CRAT-207ENST00000458362 MAP4K4O95819 1239 aaPredicted RBP25.17■■□□□ 1.62
CRAT-207ENST00000458362 ANAPC15P60006 121 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms