RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ALDH1L2Q3SY69 923 aa11.5□□□□□ -0.57
CDC42EP3-204ENST00000457889 IL2RBP14784 551 aa11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 RARSP54136 660 aaKnown RBP11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 MCM10Q7L590 875 aa11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 MBIPQ9NS73 344 aa11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 PCDH11XQ9BZA7 1347 aa11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
CDC42EP3-204ENST00000457889 MS4A1P11836 297 aa11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 BRPF1P55201 1214 aaPredicted RBP11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 FKBP8Q14318 412 aa11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 TAF7Q15545 349 aaPredicted RBP11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 IFNL2Q8IZJ0 200 aa11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 THRAP3Q9Y2W1 955 aaKnown RBP11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 SLIT2O94813 1529 aa11.48□□□□□ -0.57
CDC42EP3-204ENST00000457889 NRAPQ86VF7 1730 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 MRC1P22897 1456 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 TEFQ10587 303 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 DCTN1Q14203 1278 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 LARP1Q6PKG0 1096 aaKnown RBP11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 IL17REQ8NFR9 667 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 STRN4Q9NRL3 753 aa11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 LAS1LQ9Y4W2 734 aaKnown RBP11.47□□□□□ -0.57
CDC42EP3-204ENST00000457889 DISP2A7MBM2 1401 aa11.46□□□□□ -0.57
CDC42EP3-204ENST00000457889 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.57
CDC42EP3-204ENST00000457889 PHKG2P15735 406 aa11.46□□□□□ -0.57
CDC42EP3-204ENST00000457889 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
CDC42EP3-204ENST00000457889 TSPYL4Q9UJ04 414 aa11.46□□□□□ -0.57
CDC42EP3-204ENST00000457889 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
CDC42EP3-204ENST00000457889 HOXB7P09629 217 aa11.45□□□□□ -0.58
CDC42EP3-204ENST00000457889 AAMPQ13685 434 aa11.45□□□□□ -0.58
CDC42EP3-204ENST00000457889 TWISTNBQ3B726 338 aaPredicted RBP11.45□□□□□ -0.58
CDC42EP3-204ENST00000457889 PROM2Q8N271 834 aa11.45□□□□□ -0.58
CDC42EP3-204ENST00000457889 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
CDC42EP3-204ENST00000457889 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
CDC42EP3-204ENST00000457889 ADAMTS2O95450 1211 aa11.44□□□□□ -0.58
CDC42EP3-204ENST00000457889 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
CDC42EP3-204ENST00000457889 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
CDC42EP3-204ENST00000457889 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 VAMP4O75379 141 aa11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 CANXP27824 592 aaKnown RBP11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 WNK3Q9BYP7 1800 aa11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 SIPA1L3O60292 1781 aaPredicted RBP11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 KDM3BQ7LBC6 1761 aa11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
CDC42EP3-204ENST00000457889 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 SPATA31A5Q5VU36 1347 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 SPATA31A7Q8IWB4 1347 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 CYP27B1O15528 508 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 BCAR3O75815 825 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 ZKSCAN2Q63HK3 967 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 MPRIPQ6WCQ1 1025 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 BARGINQ6ZT62 677 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 FNBP4Q8N3X1 1017 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 SSH1Q8WYL5 1049 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 SLC52A2Q9HAB3 445 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 LRP6O75581 1613 aa11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 VIRMAQ69YN4 1812 aaKnown RBP11.42□□□□□ -0.58
CDC42EP3-204ENST00000457889 HSPA1LP34931 641 aa11.41□□□□□ -0.58
CDC42EP3-204ENST00000457889 VPS72Q15906 364 aa11.41□□□□□ -0.58
CDC42EP3-204ENST00000457889 C8orf58Q8NAV2 365 aa11.41□□□□□ -0.58
CDC42EP3-204ENST00000457889 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
CDC42EP3-204ENST00000457889 CACNA1FO60840 1977 aa11.4□□□□□ -0.58
CDC42EP3-204ENST00000457889 BTBD11A6QL63 1104 aa11.4□□□□□ -0.58
CDC42EP3-204ENST00000457889 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
CDC42EP3-204ENST00000457889 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
CDC42EP3-204ENST00000457889 BCL9LQ86UU0 1499 aa11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 ATMINO43313 823 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 CCDC30Q5VVM6 783 aa11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 ATF7IPQ6VMQ6 1270 aa11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 CHMP4BQ9H444 224 aaKnown RBP11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 HEG1Q9ULI3 1381 aa11.39□□□□□ -0.59
CDC42EP3-204ENST00000457889 PTPRCP08575 1304 aa11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 EXOC5O00471 708 aa11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 PLIN1O60240 522 aa11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 EIF4A1P60842 406 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 C8orf37Q96NL8 207 aa11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 API5Q9BZZ5 524 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-204ENST00000457889 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms