RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 BRD2P25440 801 aaKnown RBP6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 RBM25P49756 843 aaKnown RBP6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 RASSF7Q02833 373 aa6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 DBN1Q16643 649 aa6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 FOXR1Q6PIV2 292 aa6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 CNKSR1Q969H4 720 aa6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 CDCA7Q9BWT1 371 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 FHDC1Q9C0D6 1143 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 ESF1Q9H501 851 aaKnown RBP6.02□□□□□ -1.45
HMGB3P30-201ENST00000457863 CELA2BP08218 269 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P30-201ENST00000457863 TMCO4Q5TGY1 634 aa6.01□□□□□ -1.45
HMGB3P30-201ENST00000457863 LYPD4Q6UWN0 246 aa6.01□□□□□ -1.45
HMGB3P30-201ENST00000457863 RIPOR1Q6ZS17 1223 aa6.01□□□□□ -1.45
HMGB3P30-201ENST00000457863 TIMMDC1Q9NPL8 285 aa6.01□□□□□ -1.45
HMGB3P30-201ENST00000457863 DOLKQ9UPQ8 538 aa6.01□□□□□ -1.45
HMGB3P30-201ENST00000457863 A0A1B0GTH6 734 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 GPR25O00155 361 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 F11P03951 625 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 MAP3K10Q02779 954 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 CENPCQ03188 943 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 ESCO1Q5FWF5 840 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 RNF135Q8IUD6 432 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 TMEM151AQ8N4L1 468 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 CCDC82Q8N4S0 544 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 FOXD4L4Q8WXT5 416 aaPredicted RBP6□□□□□ -1.45
HMGB3P30-201ENST00000457863 ZNF428Q96B54 188 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 XAGE2Q96GT9 111 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 TRERF1Q96PN7 1200 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 GAS2L1Q99501 681 aaPredicted RBP6□□□□□ -1.45
HMGB3P30-201ENST00000457863 LRRC4BQ9NT99 713 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 IGF1RP08069 1367 aa6□□□□□ -1.45
HMGB3P30-201ENST00000457863 E9PSI1 815 aa5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 GDF11O95390 407 aa5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 MFAP1P55081 439 aaKnown RBP5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 MCM6Q14566 821 aa5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 LBRQ14739 615 aaKnown RBP5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 SLFNL1Q499Z3 407 aa5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 KANK3Q6NY19 840 aa5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 AEBP1Q8IUX7 1158 aa5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 GTPBP3Q969Y2 492 aaKnown RBP5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 SCARF2Q96GP6 870 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 DNMT3AQ9Y6K1 912 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P30-201ENST00000457863 THBS1P07996 1170 aa5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 SOX11P35716 441 aa5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 USP4Q13107 963 aa5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 GNASQ5JWF2 1037 aa5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 SIRT1Q96EB6 747 aa5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 ZSCAN10Q96SZ4 725 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P30-201ENST00000457863 MX2P20592 715 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 MARSP56192 900 aaKnown RBP5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 VAC14Q08AM6 782 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 RHBDD1Q8TEB9 315 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 UBE2Q2Q8WVN8 375 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 CFHR5Q9BXR6 569 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 ETNK1Q9HBU6 452 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 GDPD2Q9HCC8 539 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 ENAMQ9NRM1 1142 aa5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 NSFL1CQ9UNZ2 370 aaKnown RBP5.97□□□□□ -1.45
HMGB3P30-201ENST00000457863 BCRP11274 1271 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 GTF2E1P29083 439 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 SCNN1DP51172 638 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 UBAP2LQ14157 1087 aaKnown RBP5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 MAP7D1Q3KQU3 841 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 TSGA10IPQ3SY00 556 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 C4orf17Q53FE4 359 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 OXLD1Q5BKU9 147 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 PPARGC1BQ86YN6 1023 aaKnown RBP5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 ACDQ96AP0 544 aa5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 GZF1Q9H116 711 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P30-201ENST00000457863 IRS1P35568 1242 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 ABL2P42684 1182 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 MAP2K3P46734 347 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 TLR1Q15399 786 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 TMEM214Q6NUQ4 689 aaKnown RBP5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 CRISPLD1Q9H336 500 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 GPAMQ9HCL2 828 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 PHF24Q9UPV7 400 aa5.95□□□□□ -1.46
HMGB3P30-201ENST00000457863 OIP5O43482 229 aa5.94□□□□□ -1.46
HMGB3P30-201ENST00000457863 PHKA2P46019 1235 aa5.94□□□□□ -1.46
HMGB3P30-201ENST00000457863 GDF10P55107 478 aa5.94□□□□□ -1.46
HMGB3P30-201ENST00000457863 FLIIQ13045 1269 aa5.94□□□□□ -1.46
HMGB3P30-201ENST00000457863 PLPP7Q8NBV4 271 aa5.94□□□□□ -1.46
HMGB3P30-201ENST00000457863 A6NJR5 290 aa5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 PHF20L1A8MW92 1017 aa5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 STAU1O95793 577 aaKnown RBP5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 INHAP05111 366 aa5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 MSX1P28360 303 aa5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 FOXK2Q01167 660 aa5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 ATXN7L1Q9ULK2 861 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P30-201ENST00000457863 IGHA1P01876 353 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 CSB-PGBD3P0DP91 1061 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 ATP4AP20648 1035 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 SEMA3FQ13275 785 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 EFHC2Q5JST6 749 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 PODNQ7Z5L7 613 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 ZNF295-AS1Q8N0V1 137 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 PGBD3Q8N328 593 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms