RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 CPDO75976 1380 aa12.18□□□□□ -0.46
THBS3-203ENST00000457183 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
THBS3-203ENST00000457183 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 COL18A1P39060 1754 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 NUCB1Q02818 461 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 GAS2L3Q86XJ1 694 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 KDRP35968 1356 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
THBS3-203ENST00000457183 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
THBS3-203ENST00000457183 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
THBS3-203ENST00000457183 HSP90AB1P08238 724 aaKnown RBP12.16□□□□□ -0.46
THBS3-203ENST00000457183 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
THBS3-203ENST00000457183 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
THBS3-203ENST00000457183 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
THBS3-203ENST00000457183 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
THBS3-203ENST00000457183 PRKAR2BP31323 418 aa12.15□□□□□ -0.46
THBS3-203ENST00000457183 RAB3GAP1Q15042 981 aa12.15□□□□□ -0.46
THBS3-203ENST00000457183 TRIM44Q96DX7 344 aaPredicted RBP12.15□□□□□ -0.46
THBS3-203ENST00000457183 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.47
THBS3-203ENST00000457183 RGPD5Q99666 1765 aa12.14□□□□□ -0.47
THBS3-203ENST00000457183 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
THBS3-203ENST00000457183 KIF2CQ99661 725 aa12.14□□□□□ -0.47
THBS3-203ENST00000457183 HMOX1P09601 288 aa12.14□□□□□ -0.47
THBS3-203ENST00000457183 RBM6P78332 1123 aaKnown RBP12.14□□□□□ -0.47
THBS3-203ENST00000457183 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
THBS3-203ENST00000457183 EYA1Q99502 592 aa12.13□□□□□ -0.47
THBS3-203ENST00000457183 NCAPD2Q15021 1401 aa12.13□□□□□ -0.47
THBS3-203ENST00000457183 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
THBS3-203ENST00000457183 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
THBS3-203ENST00000457183 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
THBS3-203ENST00000457183 BCL9LQ86UU0 1499 aa12.13□□□□□ -0.47
THBS3-203ENST00000457183 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 DLG5Q8TDM6 1919 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
THBS3-203ENST00000457183 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
THBS3-203ENST00000457183 SLIT2O94813 1529 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 PDE4CQ08493 712 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 NFE2L2Q16236 605 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 UNC5CLQ8IV45 518 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 PRDM11Q9NQV5 511 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 IL16Q14005 1332 aa12.12□□□□□ -0.47
THBS3-203ENST00000457183 PDIA4P13667 645 aaKnown RBP12.11□□□□□ -0.47
THBS3-203ENST00000457183 RIPK4P57078 832 aa12.11□□□□□ -0.47
THBS3-203ENST00000457183 ZC3H6P61129 1189 aaKnown RBP12.11□□□□□ -0.47
THBS3-203ENST00000457183 RGPD2P0DJD1 1756 aa12.11□□□□□ -0.47
THBS3-203ENST00000457183 ATRNO75882 1429 aa12.11□□□□□ -0.47
THBS3-203ENST00000457183 PLEKHG2Q9H7P9 1386 aa12.11□□□□□ -0.47
THBS3-203ENST00000457183 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
THBS3-203ENST00000457183 LMOD3Q0VAK6 560 aa12.11□□□□□ -0.47
THBS3-203ENST00000457183 KIAA0232Q92628 1395 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 ZBTB7CA1YPR0 619 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 PTMSP20962 102 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 AEBP1Q8IUX7 1158 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 PHACTR3Q96KR7 559 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 ERBB3P21860 1342 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 K7ELQ4 463 aaPredicted RBP12.1□□□□□ -0.47
THBS3-203ENST00000457183 CHRNA2Q15822 529 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
THBS3-203ENST00000457183 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
THBS3-203ENST00000457183 RGS12O14924 1447 aa12.09□□□□□ -0.47
THBS3-203ENST00000457183 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.09□□□□□ -0.47
THBS3-203ENST00000457183 COL14A1Q05707 1796 aaKnown RBP12.09□□□□□ -0.47
THBS3-203ENST00000457183 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
THBS3-203ENST00000457183 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
THBS3-203ENST00000457183 NWD2Q9ULI1 1742 aa12.09□□□□□ -0.47
THBS3-203ENST00000457183 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
THBS3-203ENST00000457183 LTV1Q96GA3 475 aaPredicted RBP12.09□□□□□ -0.47
THBS3-203ENST00000457183 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
THBS3-203ENST00000457183 SSFA2P28290 1259 aa12.08□□□□□ -0.48
THBS3-203ENST00000457183 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
THBS3-203ENST00000457183 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
THBS3-203ENST00000457183 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
THBS3-203ENST00000457183 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
THBS3-203ENST00000457183 CCDC173Q0VFZ6 552 aa12.07□□□□□ -0.48
THBS3-203ENST00000457183 GCC1Q96CN9 775 aa12.07□□□□□ -0.48
THBS3-203ENST00000457183 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
THBS3-203ENST00000457183 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
THBS3-203ENST00000457183 A0A0U1RQG5 324 aaPredicted RBP12.06□□□□□ -0.48
THBS3-203ENST00000457183 GOLGA6L22H0YM25 854 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
THBS3-203ENST00000457183 VPS72Q15906 364 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 A0A0G2JS52 829 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 KLHL40Q2TBA0 621 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 CLEC17AQ6ZS10 378 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
THBS3-203ENST00000457183 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
THBS3-203ENST00000457183 GLI3P10071 1580 aa12.05□□□□□ -0.48
THBS3-203ENST00000457183 COL5A2P05997 1499 aaPredicted RBP12.05□□□□□ -0.48
THBS3-203ENST00000457183 BAG4O95429 457 aaKnown RBP12.05□□□□□ -0.48
THBS3-203ENST00000457183 TPM2P07951 284 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms