RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 KIAA2012Q0VF49 1180 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 PLEKHO1Q53GL0 409 aaPredicted RBP5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 G2E3Q7L622 706 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 PRIMPOLQ96LW4 560 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 IFT140Q96RY7 1462 aa5.52□□□□□ -1.53
DEPDC1-202ENST00000456315 BAZ2BQ9UIF8 2168 aaKnown RBP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 NOP2P46087 812 aaKnown RBP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 DNM1Q05193 864 aaKnown RBP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 TTC22Q5TAA0 569 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 RTF1Q92541 710 aaKnown RBP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 MADDQ8WXG6 1647 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 PSEN1P49768 467 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 ELF2Q15723 593 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 FERMT3Q86UX7 667 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 FTOQ9C0B1 505 aaKnown RBP eCLIP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 PNMA6EA0A0J9YXQ4 647 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 U2SURPO15042 1029 aaKnown RBP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 FIBPO43427 364 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 HMOX1P09601 288 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 RSPH4AQ5TD94 716 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 NEDD4P46934 1319 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 ATP10AO60312 1499 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 F6X3S4 739 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 PPFIA3O75145 1194 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 CKAP2LQ8IYA6 745 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 MRPL50Q8N5N7 158 aaKnown RBP5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 NCKAP5LQ9HCH0 1330 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 RTL1A6NKG5 1358 aa5.51□□□□□ -1.53
DEPDC1-202ENST00000456315 CROCC2H7BZ55 1655 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 MORC1Q86VD1 984 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 JPH4Q96JJ6 628 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 ZRANB2O95218 330 aaKnown RBP eCLIP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 GNAI3P08754 354 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 SUGCTQ9HAC7 445 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 MYH10P35580 1976 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 ABCC4O15439 1325 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 SCAF11Q99590 1463 aaKnown RBP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 MYCNP04198 464 aaPredicted RBP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 CABP2Q9NPB3 220 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 ADGRB2O60241 1585 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 LOC102724159A0A0B4J2E5 919 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 PWP2Q15269 919 aaKnown RBP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 DNAJC21Q5F1R6 531 aaKnown RBP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 KIF1BPQ96EK5 621 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 PIK3R4Q99570 1358 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 UBXN6Q9BZV1 441 aa5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 TFIP11Q9UBB9 837 aaKnown RBP5.5□□□□□ -1.53
DEPDC1-202ENST00000456315 CFAP74Q9C0B2 1584 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 COL3A1P02461 1466 aaPredicted RBP5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 CD163L1Q9NR16 1453 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 CYP2C19P33261 490 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 SLC20A2Q08357 652 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 CAMK4Q16566 473 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 NYAP1Q6ZVC0 841 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 RUFY3Q7L099 469 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 TRMT1Q9NXH9 659 aaKnown RBP5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 SETD1BQ9UPS6 1966 aaKnown RBP5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 ZNF853P0CG23 659 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 H2AFXP16104 143 aaPredicted RBP5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 NUCB2P80303 420 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 RABEP1Q15276 862 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 CEP85Q6P2H3 762 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 MBIPQ9NS73 344 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 MIS18AQ9NYP9 233 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 SAMD9LQ8IVG5 1584 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 PTPRCP08575 1304 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 A0A0U1RQJ8 604 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 E4F1Q66K89 784 aaPredicted RBP5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 ATRIPQ8WXE1 791 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 CCDC39Q9UFE4 941 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 TTC14Q96N46 770 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 TAOK2Q9UL54 1235 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 MRVI1Q9Y6F6 885 aa5.49□□□□□ -1.53
DEPDC1-202ENST00000456315 CDC42BPBQ9Y5S2 1711 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 PDE1AP54750 535 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 SYT10Q6XYQ8 523 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 ZNF428Q96B54 188 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 PGBD1Q96JS3 809 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 MTMR6Q9Y217 621 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 FER1L4A9Z1Z3 1794 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 YEATS2Q9ULM3 1422 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 IQCB1Q15051 598 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 ZSCAN25Q6NSZ9 544 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 MTERF4Q7Z6M4 381 aaKnown RBP5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 NBPF11Q86T75 865 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 NECAB1Q8N987 351 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 SMARCE1Q969G3 411 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 IRX2Q9BZI1 471 aaPredicted RBP5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 KIAA0556O60303 1618 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 CDC45O75419 566 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 CDCA8Q53HL2 280 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 ZNF771Q7L3S4 317 aaPredicted RBP5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 TSPY26PQ9H489 355 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 OGFRQ9NZT2 677 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 NINLQ9Y2I6 1382 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 LAMC1P11047 1609 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 SEC31AO94979 1220 aaKnown RBP5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 PRKAR2BP31323 418 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 CSPP1Q1MSJ5 1256 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms